RNA–Protein interactions for RNA: ENST00000350437.8

DDX11-202, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,724 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-202ENST00000350437 NISCHQ9Y2I1 1504 aa18.19■□□□□ 0.5
DDX11-202ENST00000350437 PELP1Q8IZL8 1130 aaKnown RBP16.84■□□□□ 0.29
DDX11-202ENST00000350437 HRCP23327 699 aa16.75■□□□□ 0.27
DDX11-202ENST00000350437 MYT1Q01538 1121 aa16.67■□□□□ 0.26
DDX11-202ENST00000350437 PPARGC1BQ86YN6 1023 aaKnown RBP16.66■□□□□ 0.26
DDX11-202ENST00000350437 DCAF8L2P0C7V8 631 aa16.52■□□□□ 0.23
DDX11-202ENST00000350437 PCGF6Q9BYE7 350 aa16.52■□□□□ 0.23
DDX11-202ENST00000350437 SUPT5HO00267 1087 aaKnown RBP16.32■□□□□ 0.2
DDX11-202ENST00000350437 SHROOM4Q9ULL8 1493 aa16.24■□□□□ 0.19
DDX11-202ENST00000350437 SCAF1Q9H7N4 1312 aaKnown RBP16.08■□□□□ 0.17
DDX11-202ENST00000350437 MYO15BQ96JP2 1530 aa15.94■□□□□ 0.14
DDX11-202ENST00000350437 TTBK1Q5TCY1 1321 aaPredicted RBP15.93■□□□□ 0.14
DDX11-202ENST00000350437 CHIC1Q5VXU3 224 aa15.85■□□□□ 0.13
DDX11-202ENST00000350437 CCDC180Q9P1Z9 1646 aa15.76■□□□□ 0.11
DDX11-202ENST00000350437 LOC105371045A0A1W2PR82 267 aa15.73■□□□□ 0.11
DDX11-202ENST00000350437 TRIM26Q12899 539 aaPredicted RBP15.67■□□□□ 0.1
DDX11-202ENST00000350437 NEUROD1Q13562 356 aa15.59■□□□□ 0.09
DDX11-202ENST00000350437 GTF3C3Q9Y5Q9 886 aa15.58■□□□□ 0.09
DDX11-202ENST00000350437 ZEB1P37275 1124 aaPredicted RBP15.56■□□□□ 0.08
DDX11-202ENST00000350437 ACIN1Q9UKV3 1341 aaKnown RBP15.56■□□□□ 0.08
DDX11-202ENST00000350437 PRKCSHP14314 528 aaPredicted RBP15.53■□□□□ 0.08
DDX11-202ENST00000350437 DCAF1Q9Y4B6 1507 aa15.48■□□□□ 0.07
DDX11-202ENST00000350437 ERICH6Q7L0X2 663 aa15.47■□□□□ 0.07
DDX11-202ENST00000350437 CENPBP07199 599 aaPredicted RBP15.4■□□□□ 0.06
DDX11-202ENST00000350437 EHMT2Q96KQ7 1210 aa15.37■□□□□ 0.05
DDX11-202ENST00000350437 SLC24A1O60721 1099 aa15.34■□□□□ 0.05
DDX11-202ENST00000350437 YTHDC1Q96MU7 727 aaKnown RBP15.3■□□□□ 0.04
DDX11-202ENST00000350437 ZCCHC6Q5VYS8 1495 aaKnown RBP15.25■□□□□ 0.03
DDX11-202ENST00000350437 DIEXFQ68CQ4 756 aaKnown RBP15.22■□□□□ 0.03
DDX11-202ENST00000350437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.21■□□□□ 0.03
DDX11-202ENST00000350437 FAM9AQ8IZU1 332 aaPredicted RBP15.2■□□□□ 0.02
DDX11-202ENST00000350437 CCER1Q8TC90 406 aaPredicted RBP15.18■□□□□ 0.02
DDX11-202ENST00000350437 ABCC9O60706 1549 aa15.17■□□□□ 0.02
DDX11-202ENST00000350437 BCL11AQ9H165 835 aa15.17■□□□□ 0.02
DDX11-202ENST00000350437 APLP2Q06481 763 aa15.03■□□□□ -0
DDX11-202ENST00000350437 TRIM41Q8WV44 630 aa14.9□□□□□ -0.02
DDX11-202ENST00000350437 MIER1Q8N108 512 aa14.82□□□□□ -0.04
DDX11-202ENST00000350437 ANP32EQ9BTT0 268 aa14.82□□□□□ -0.04
DDX11-202ENST00000350437 ZNF316A6NFI3 1004 aaPredicted RBP14.78□□□□□ -0.04
DDX11-202ENST00000350437 CSRNP3Q8WYN3 585 aa14.77□□□□□ -0.05
DDX11-202ENST00000350437 NACADO15069 1562 aa14.76□□□□□ -0.05
DDX11-202ENST00000350437 TSHZ2Q9NRE2 1034 aa14.66□□□□□ -0.06
DDX11-202ENST00000350437 RB1CC1Q8TDY2 1594 aa14.66□□□□□ -0.06
DDX11-202ENST00000350437 SUPT16HQ9Y5B9 1047 aaKnown RBP14.65□□□□□ -0.06
DDX11-202ENST00000350437 BCANQ96GW7 911 aa14.63□□□□□ -0.07
DDX11-202ENST00000350437 SCRIBQ14160 1630 aa14.63□□□□□ -0.07
DDX11-202ENST00000350437 DAXXQ9UER7 740 aaPredicted RBP14.59□□□□□ -0.07
DDX11-202ENST00000350437 EIF5BO60841 1220 aaKnown RBP14.54□□□□□ -0.08
DDX11-202ENST00000350437 HNRNPUL2Q1KMD3 747 aaKnown RBP14.48□□□□□ -0.09
DDX11-202ENST00000350437 RANGAP1P46060 587 aaPredicted RBP14.45□□□□□ -0.1
DDX11-202ENST00000350437 PABPN1Q86U42 306 aaKnown RBP eCLIP14.4□□□□□ -0.1
DDX11-202ENST00000350437 FKBP8Q14318 412 aa14.35□□□□□ -0.11
DDX11-202ENST00000350437 CLSPNQ9HAW4 1339 aa14.34□□□□□ -0.11
DDX11-202ENST00000350437 ITGAEP38570 1179 aa14.33□□□□□ -0.11
DDX11-202ENST00000350437 RBM19Q9Y4C8 960 aaKnown RBP14.32□□□□□ -0.12
DDX11-202ENST00000350437 UNC13AQ9UPW8 1703 aa14.3□□□□□ -0.12
DDX11-202ENST00000350437 KCNH8Q96L42 1107 aa14.25□□□□□ -0.13
DDX11-202ENST00000350437 BICRAQ9NZM4 1560 aa14.24□□□□□ -0.13
DDX11-202ENST00000350437 NEFLP07196 543 aa14.23□□□□□ -0.13
DDX11-202ENST00000350437 UBTFP17480 764 aaKnown RBP14.22□□□□□ -0.13
DDX11-202ENST00000350437 CECR2Q9BXF3 1484 aa14.21□□□□□ -0.13
DDX11-202ENST00000350437 MSH5O43196 834 aa14.19□□□□□ -0.14
DDX11-202ENST00000350437 ANO8Q9HCE9 1232 aaPredicted RBP14.18□□□□□ -0.14
DDX11-202ENST00000350437 RSF1Q96T23 1441 aaPredicted RBP14.18□□□□□ -0.14
DDX11-202ENST00000350437 CEP162Q5TB80 1403 aa14.11□□□□□ -0.15
DDX11-202ENST00000350437 PLEKHG5O94827 1062 aa14.11□□□□□ -0.15
DDX11-202ENST00000350437 DEKP35659 375 aaKnown RBP14.11□□□□□ -0.15
DDX11-202ENST00000350437 TRIM52Q96A61 297 aa14.09□□□□□ -0.15
DDX11-202ENST00000350437 MROH2BQ7Z745 1585 aa14.09□□□□□ -0.15
DDX11-202ENST00000350437 CCDC136Q96JN2 1154 aa14.08□□□□□ -0.16
DDX11-202ENST00000350437 NBR1Q14596 966 aa14.06□□□□□ -0.16
DDX11-202ENST00000350437 IRX6P78412 446 aaPredicted RBP14.05□□□□□ -0.16
DDX11-202ENST00000350437 BAZ1AQ9NRL2 1556 aaPredicted RBP14.03□□□□□ -0.16
DDX11-202ENST00000350437 PODXL2Q9NZ53 605 aa14.02□□□□□ -0.17
DDX11-202ENST00000350437 SALL2Q9Y467 1007 aaPredicted RBP14.01□□□□□ -0.17
DDX11-202ENST00000350437 WRNQ14191 1432 aaPredicted RBP eCLIP14□□□□□ -0.17
DDX11-202ENST00000350437 RTN4Q9NQC3 1192 aaKnown RBP14□□□□□ -0.17
DDX11-202ENST00000350437 UBE2Q2Q8WVN8 375 aa14□□□□□ -0.17
DDX11-202ENST00000350437 CDK11AQ9UQ88 783 aaPredicted RBP13.99□□□□□ -0.17
DDX11-202ENST00000350437 DDX10Q13206 875 aaKnown RBP13.99□□□□□ -0.17
DDX11-202ENST00000350437 SMARCA4P51532 1647 aa13.97□□□□□ -0.17
DDX11-202ENST00000350437 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.95□□□□□ -0.18
DDX11-202ENST00000350437 WIZO95785 1651 aa13.94□□□□□ -0.18
DDX11-202ENST00000350437 ATP1B4Q9UN42 357 aaPredicted RBP13.92□□□□□ -0.18
DDX11-202ENST00000350437 HIRIP3Q9BW71 556 aaPredicted RBP13.91□□□□□ -0.18
DDX11-202ENST00000350437 FANCIQ9NVI1 1328 aa13.89□□□□□ -0.19
DDX11-202ENST00000350437 TNIKQ9UKE5 1360 aa13.88□□□□□ -0.19
DDX11-202ENST00000350437 SOGA1O94964 1423 aa13.87□□□□□ -0.19
DDX11-202ENST00000350437 PKNOX2Q96KN3 472 aa13.87□□□□□ -0.19
DDX11-202ENST00000350437 MYT1LQ9UL68 1186 aa13.86□□□□□ -0.19
DDX11-202ENST00000350437 IL27Q8NEV9 243 aa13.84□□□□□ -0.19
DDX11-202ENST00000350437 DHX57Q6P158 1386 aaKnown RBP13.84□□□□□ -0.19
DDX11-202ENST00000350437 CCDC88BA6NC98 1476 aa13.83□□□□□ -0.2
DDX11-202ENST00000350437 EIF4G1Q04637 1599 aaKnown RBP13.83□□□□□ -0.2
DDX11-202ENST00000350437 RTL5Q5HYW3 569 aaPredicted RBP13.82□□□□□ -0.2
DDX11-202ENST00000350437 ABCC8Q09428 1581 aa13.81□□□□□ -0.2
DDX11-202ENST00000350437 ATAD2BQ9ULI0 1458 aa13.81□□□□□ -0.2
DDX11-202ENST00000350437 ANP32CO43423 234 aa13.78□□□□□ -0.2
DDX11-202ENST00000350437 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
DDX11-202ENST00000350437 NOP58Q9Y2X3 529 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 565.2 ms