RNA–Protein interactions for RNA: ENST00000349499.2

CLIC6-201, Transcript of chloride intracellular channel 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLIC6, Length 3,806 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC6-201ENST00000349499 SKAP1Q86WV1 359 aa23.06■■□□□ 1.28
CLIC6-201ENST00000349499 EXOC6Q8TAG9 804 aa23.06■■□□□ 1.28
CLIC6-201ENST00000349499 CCDC7Q96M83 1385 aa23.06■■□□□ 1.28
CLIC6-201ENST00000349499 PKD2Q13563 968 aa23.05■■□□□ 1.28
CLIC6-201ENST00000349499 KIF7Q2M1P5 1343 aa23.04■■□□□ 1.28
CLIC6-201ENST00000349499 FGD6Q6ZV73 1430 aa23.04■■□□□ 1.28
CLIC6-201ENST00000349499 NEUROD2Q15784 382 aa23.04■■□□□ 1.28
CLIC6-201ENST00000349499 AQRO60306 1485 aaKnown RBP eCLIP23.02■■□□□ 1.28
CLIC6-201ENST00000349499 NBPF8Q3BBV2 869 aa23.02■■□□□ 1.28
CLIC6-201ENST00000349499 PLIN1O60240 522 aa23.02■■□□□ 1.28
CLIC6-201ENST00000349499 PTPRKQ15262 1439 aa23.02■■□□□ 1.27
CLIC6-201ENST00000349499 BRPF3Q9ULD4 1205 aa23.01■■□□□ 1.27
CLIC6-201ENST00000349499 WDR43Q15061 677 aaKnown RBP eCLIP23■■□□□ 1.27
CLIC6-201ENST00000349499 FGD5Q6ZNL6 1462 aa23■■□□□ 1.27
CLIC6-201ENST00000349499 FMN1Q68DA7 1419 aa23■■□□□ 1.27
CLIC6-201ENST00000349499 PDE4AP27815 886 aa23■■□□□ 1.27
CLIC6-201ENST00000349499 CFTRP13569 1480 aa22.99■■□□□ 1.27
CLIC6-201ENST00000349499 ZNF644Q9H582 1327 aaPredicted RBP22.98■■□□□ 1.27
CLIC6-201ENST00000349499 PDS5BQ9NTI5 1447 aa22.97■■□□□ 1.27
CLIC6-201ENST00000349499 TNNT2P45379 298 aaPredicted RBP22.95■■□□□ 1.26
CLIC6-201ENST00000349499 PCF11O94913 1555 aaKnown RBP22.94■■□□□ 1.26
CLIC6-201ENST00000349499 BIVM-ERCC5R4GMW8 1640 aa22.93■■□□□ 1.26
CLIC6-201ENST00000349499 NAIPQ13075 1403 aa22.92■■□□□ 1.26
CLIC6-201ENST00000349499 PEG3Q9GZU2 1588 aa22.92■■□□□ 1.26
CLIC6-201ENST00000349499 HFM1A2PYH4 1435 aa22.91■■□□□ 1.26
CLIC6-201ENST00000349499 PPM1GO15355 546 aaPredicted RBP22.9■■□□□ 1.26
CLIC6-201ENST00000349499 RCAN3Q9UKA8 241 aa22.89■■□□□ 1.25
CLIC6-201ENST00000349499 ST20-MTHFSA0A0A6YYL1 179 aa22.88■■□□□ 1.25
CLIC6-201ENST00000349499 PLEKHD1A6NEE1 506 aa22.87■■□□□ 1.25
CLIC6-201ENST00000349499 HMGXB3Q12766 1538 aa22.87■■□□□ 1.25
CLIC6-201ENST00000349499 TCERG1O14776 1098 aaKnown RBP22.86■■□□□ 1.25
CLIC6-201ENST00000349499 RRP1P56182 461 aaKnown RBP22.85■■□□□ 1.25
CLIC6-201ENST00000349499 SMG6Q86US8 1419 aaKnown RBP22.84■■□□□ 1.25
CLIC6-201ENST00000349499 FRAT1Q92837 279 aaPredicted RBP22.83■■□□□ 1.25
CLIC6-201ENST00000349499 MAP3K1Q13233 1512 aa22.82■■□□□ 1.24
CLIC6-201ENST00000349499 SPRYD3Q8NCJ5 442 aa22.82■■□□□ 1.24
CLIC6-201ENST00000349499 CDCA7LQ96GN5 454 aa22.8■■□□□ 1.24
CLIC6-201ENST00000349499 GSE1Q14687 1217 aa22.79■■□□□ 1.24
CLIC6-201ENST00000349499 NCOA1Q15788 1441 aa22.78■■□□□ 1.24
CLIC6-201ENST00000349499 PNISRQ8TF01 805 aaKnown RBP22.78■■□□□ 1.24
CLIC6-201ENST00000349499 CASKIN1Q8WXD9 1431 aa22.78■■□□□ 1.24
CLIC6-201ENST00000349499 BACH2Q9BYV9 841 aa22.78■■□□□ 1.24
CLIC6-201ENST00000349499 KNSTRNQ9Y448 316 aa22.78■■□□□ 1.24
CLIC6-201ENST00000349499 NCOA2Q15596 1464 aa22.77■■□□□ 1.24
CLIC6-201ENST00000349499 PTPN23Q9H3S7 1636 aa22.77■■□□□ 1.24
CLIC6-201ENST00000349499 NFKBIBQ15653 356 aa22.76■■□□□ 1.23
CLIC6-201ENST00000349499 MYOM3Q5VTT5 1437 aa22.76■■□□□ 1.23
CLIC6-201ENST00000349499 USP35Q9P2H5 1018 aa22.75■■□□□ 1.23
CLIC6-201ENST00000349499 NUP155O75694 1391 aa22.75■■□□□ 1.23
CLIC6-201ENST00000349499 DDRGK1Q96HY6 314 aa22.74■■□□□ 1.23
CLIC6-201ENST00000349499 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.74■■□□□ 1.23
CLIC6-201ENST00000349499 HNRNPMP52272 730 aaKnown RBP eCLIP22.73■■□□□ 1.23
CLIC6-201ENST00000349499 CCDC146Q8IYE0 955 aa22.73■■□□□ 1.23
CLIC6-201ENST00000349499 FYCO1Q9BQS8 1478 aa22.73■■□□□ 1.23
CLIC6-201ENST00000349499 CRBNQ96SW2 442 aa22.72■■□□□ 1.23
CLIC6-201ENST00000349499 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.72■■□□□ 1.23
CLIC6-201ENST00000349499 USP47Q96K76 1375 aa22.7■■□□□ 1.22
CLIC6-201ENST00000349499 SLKQ9H2G2 1235 aaPredicted RBP22.69■■□□□ 1.22
CLIC6-201ENST00000349499 HSP90AA1P07900 732 aaKnown RBP22.67■■□□□ 1.22
CLIC6-201ENST00000349499 UPF2Q9HAU5 1272 aaKnown RBP22.67■■□□□ 1.22
CLIC6-201ENST00000349499 POLA1P09884 1462 aaPredicted RBP22.66■■□□□ 1.22
CLIC6-201ENST00000349499 SLC24A1O60721 1099 aa22.66■■□□□ 1.22
CLIC6-201ENST00000349499 TOPBP1Q92547 1522 aa22.65■■□□□ 1.22
CLIC6-201ENST00000349499 FRAT2O75474 233 aaPredicted RBP22.64■■□□□ 1.22
CLIC6-201ENST00000349499 ROCK2O75116 1388 aaKnown RBP22.63■■□□□ 1.21
CLIC6-201ENST00000349499 GAPVD1Q14C86 1478 aa22.62■■□□□ 1.21
CLIC6-201ENST00000349499 RNF123Q5XPI4 1314 aa22.6■■□□□ 1.21
CLIC6-201ENST00000349499 KDM5BQ9UGL1 1544 aa22.6■■□□□ 1.21
CLIC6-201ENST00000349499 CFAP43Q8NDM7 1665 aa22.59■■□□□ 1.21
CLIC6-201ENST00000349499 CLUAP1Q96AJ1 413 aa22.59■■□□□ 1.21
CLIC6-201ENST00000349499 PANK3Q9H999 370 aa22.59■■□□□ 1.21
CLIC6-201ENST00000349499 MS4A1P11836 297 aa22.59■■□□□ 1.21
CLIC6-201ENST00000349499 C20orf194Q5TEA3 1177 aa22.59■■□□□ 1.21
CLIC6-201ENST00000349499 GZF1Q9H116 711 aaPredicted RBP22.58■■□□□ 1.2
CLIC6-201ENST00000349499 SAFB2Q14151 953 aaKnown RBP eCLIP22.57■■□□□ 1.2
CLIC6-201ENST00000349499 KTN1Q86UP2 1357 aaKnown RBP22.57■■□□□ 1.2
CLIC6-201ENST00000349499 MYBBP1AQ9BQG0 1328 aaKnown RBP22.57■■□□□ 1.2
CLIC6-201ENST00000349499 NLRP13Q86W25 1043 aa22.57■■□□□ 1.2
CLIC6-201ENST00000349499 TMF1P82094 1093 aa22.55■■□□□ 1.2
CLIC6-201ENST00000349499 DHX29Q7Z478 1369 aaKnown RBP22.55■■□□□ 1.2
CLIC6-201ENST00000349499 BCL2L13Q9BXK5 485 aa22.55■■□□□ 1.2
CLIC6-201ENST00000349499 ARID4BQ4LE39 1312 aaPredicted RBP22.55■■□□□ 1.2
CLIC6-201ENST00000349499 ANKRD30BQ9BXX2 1392 aa22.55■■□□□ 1.2
CLIC6-201ENST00000349499 RRP7AQ9Y3A4 280 aaKnown RBP22.53■■□□□ 1.2
CLIC6-201ENST00000349499 WASHC2CQ9Y4E1 1318 aa22.52■■□□□ 1.2
CLIC6-201ENST00000349499 KIF15Q9NS87 1388 aa22.52■■□□□ 1.2
CLIC6-201ENST00000349499 RALBP1Q15311 655 aa22.51■■□□□ 1.19
CLIC6-201ENST00000349499 JPH4Q96JJ6 628 aa22.5■■□□□ 1.19
CLIC6-201ENST00000349499 NBPF1Q3BBV0 1214 aa22.49■■□□□ 1.19
CLIC6-201ENST00000349499 KDM6BO15054 1643 aa22.48■■□□□ 1.19
CLIC6-201ENST00000349499 TPRNQ4KMQ1 711 aa22.48■■□□□ 1.19
CLIC6-201ENST00000349499 DENND4BO75064 1496 aaPredicted RBP22.47■■□□□ 1.19
CLIC6-201ENST00000349499 URB2Q14146 1524 aaKnown RBP22.46■■□□□ 1.19
CLIC6-201ENST00000349499 PLPPR3Q6T4P5 718 aa22.46■■□□□ 1.19
CLIC6-201ENST00000349499 UBE2Q2Q8WVN8 375 aa22.45■■□□□ 1.18
CLIC6-201ENST00000349499 RPRD2Q5VT52 1461 aaKnown RBP22.44■■□□□ 1.18
CLIC6-201ENST00000349499 U2SURPO15042 1029 aaKnown RBP22.44■■□□□ 1.18
CLIC6-201ENST00000349499 FAM161AQ3B820 660 aa22.44■■□□□ 1.18
CLIC6-201ENST00000349499 BECN1Q14457 450 aa22.43■■□□□ 1.18
CLIC6-201ENST00000349499 NUTM2DQ5VT03 806 aaPredicted RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms