RNA–Protein interactions for RNA: ENST00000342784.6

SYDE1-201, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYDE1, Length 3,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-201ENST00000342784 PRKRIP1Q9H875 184 aaPredicted RBP18.32■□□□□ 0.52
SYDE1-201ENST00000342784 WASHC2CQ9Y4E1 1318 aa18.32■□□□□ 0.52
SYDE1-201ENST00000342784 EIF4G2P78344 907 aaKnown RBP eCLIP18.31■□□□□ 0.52
SYDE1-201ENST00000342784 BCL11BQ9C0K0 894 aaPredicted RBP18.31■□□□□ 0.52
SYDE1-201ENST00000342784 PHLDB1Q86UU1 1377 aa18.31■□□□□ 0.52
SYDE1-201ENST00000342784 AKNAQ7Z591 1439 aa18.3■□□□□ 0.52
SYDE1-201ENST00000342784 AAMPQ13685 434 aa18.3■□□□□ 0.52
SYDE1-201ENST00000342784 GSE1Q14687 1217 aa18.29■□□□□ 0.52
SYDE1-201ENST00000342784 GRIN2BQ13224 1484 aa18.29■□□□□ 0.52
SYDE1-201ENST00000342784 FHAD1B1AJZ9 1412 aa18.29■□□□□ 0.52
SYDE1-201ENST00000342784 POLR3GLQ9BT43 218 aa18.29■□□□□ 0.52
SYDE1-201ENST00000342784 ABCA5Q8WWZ7 1642 aa18.29■□□□□ 0.52
SYDE1-201ENST00000342784 ARHGAP35Q9NRY4 1499 aa18.28■□□□□ 0.52
SYDE1-201ENST00000342784 SNAPC4Q5SXM2 1469 aa18.28■□□□□ 0.52
SYDE1-201ENST00000342784 NUDCQ9Y266 331 aa18.27■□□□□ 0.52
SYDE1-201ENST00000342784 CNTLNQ9NXG0 1405 aa18.25■□□□□ 0.51
SYDE1-201ENST00000342784 EIF4G3O43432 1585 aaKnown RBP18.25■□□□□ 0.51
SYDE1-201ENST00000342784 CHIC2Q9UKJ5 165 aa18.25■□□□□ 0.51
SYDE1-201ENST00000342784 TCERG1O14776 1098 aaKnown RBP18.24■□□□□ 0.51
SYDE1-201ENST00000342784 PDE4AP27815 886 aa18.24■□□□□ 0.51
SYDE1-201ENST00000342784 RSPH6AQ9H0K4 717 aa18.23■□□□□ 0.51
SYDE1-201ENST00000342784 PBRM1Q86U86 1689 aa18.22■□□□□ 0.51
SYDE1-201ENST00000342784 LRRC9Q6ZRR7 1453 aa18.22■□□□□ 0.51
SYDE1-201ENST00000342784 SMG6Q86US8 1419 aaKnown RBP18.21■□□□□ 0.51
SYDE1-201ENST00000342784 CUL7Q14999 1698 aa18.21■□□□□ 0.51
SYDE1-201ENST00000342784 TIAM1Q13009 1591 aa18.21■□□□□ 0.51
SYDE1-201ENST00000342784 DDRGK1Q96HY6 314 aa18.2■□□□□ 0.5
SYDE1-201ENST00000342784 FHOD3Q2V2M9 1422 aa18.2■□□□□ 0.5
SYDE1-201ENST00000342784 KLHL34Q8N239 644 aa18.18■□□□□ 0.5
SYDE1-201ENST00000342784 FRAT1Q92837 279 aaPredicted RBP18.17■□□□□ 0.5
SYDE1-201ENST00000342784 NFKBIBQ15653 356 aa18.15■□□□□ 0.5
SYDE1-201ENST00000342784 CCDC18Q5T9S5 1454 aa18.15■□□□□ 0.5
SYDE1-201ENST00000342784 BACH2Q9BYV9 841 aa18.14■□□□□ 0.49
SYDE1-201ENST00000342784 CCDC7Q96M83 1385 aa18.13■□□□□ 0.49
SYDE1-201ENST00000342784 UACAQ9BZF9 1416 aa18.12■□□□□ 0.49
SYDE1-201ENST00000342784 MAP3K1Q13233 1512 aa18.12■□□□□ 0.49
SYDE1-201ENST00000342784 ADAMTS12P58397 1594 aa18.12■□□□□ 0.49
SYDE1-201ENST00000342784 RNF123Q5XPI4 1314 aa18.12■□□□□ 0.49
SYDE1-201ENST00000342784 FOXD1Q16676 465 aa18.11■□□□□ 0.49
SYDE1-201ENST00000342784 MS4A1P11836 297 aa18.1■□□□□ 0.49
SYDE1-201ENST00000342784 EXOC6Q8TAG9 804 aa18.1■□□□□ 0.49
SYDE1-201ENST00000342784 NCOA2Q15596 1464 aa18.09■□□□□ 0.49
SYDE1-201ENST00000342784 FAM43AQ8N2R8 423 aa18.09■□□□□ 0.49
SYDE1-201ENST00000342784 GRIN2AQ12879 1464 aa18.08■□□□□ 0.49
SYDE1-201ENST00000342784 ZNF326Q5BKZ1 582 aaKnown RBP18.08■□□□□ 0.48
SYDE1-201ENST00000342784 SLC4A3P48751 1232 aa18.08■□□□□ 0.48
SYDE1-201ENST00000342784 RRP7BPQ9NSQ0 103 aa18.06■□□□□ 0.48
SYDE1-201ENST00000342784 SYNJ2O15056 1496 aa18.05■□□□□ 0.48
SYDE1-201ENST00000342784 JPH4Q96JJ6 628 aa18.05■□□□□ 0.48
SYDE1-201ENST00000342784 MAGI1Q96QZ7 1491 aaPredicted RBP18.05■□□□□ 0.48
SYDE1-201ENST00000342784 TMC1Q8TDI8 760 aa18.05■□□□□ 0.48
SYDE1-201ENST00000342784 CTTNBP2Q8WZ74 1663 aa18.04■□□□□ 0.48
SYDE1-201ENST00000342784 RRP1P56182 461 aaKnown RBP18.04■□□□□ 0.48
SYDE1-201ENST00000342784 NCOA1Q15788 1441 aa18.02■□□□□ 0.47
SYDE1-201ENST00000342784 KIF7Q2M1P5 1343 aa18.01■□□□□ 0.47
SYDE1-201ENST00000342784 L3MBTL2Q969R5 705 aa18.01■□□□□ 0.47
SYDE1-201ENST00000342784 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18■□□□□ 0.47
SYDE1-201ENST00000342784 IQGAP2Q13576 1575 aa17.99■□□□□ 0.47
SYDE1-201ENST00000342784 HFM1A2PYH4 1435 aa17.99■□□□□ 0.47
SYDE1-201ENST00000342784 RCAN3Q9UKA8 241 aa17.99■□□□□ 0.47
SYDE1-201ENST00000342784 FMN1Q68DA7 1419 aa17.99■□□□□ 0.47
SYDE1-201ENST00000342784 FGD6Q6ZV73 1430 aa17.97■□□□□ 0.47
SYDE1-201ENST00000342784 FRAT2O75474 233 aaPredicted RBP17.96■□□□□ 0.47
SYDE1-201ENST00000342784 KIAA0586Q9BVV6 1533 aa17.95■□□□□ 0.46
SYDE1-201ENST00000342784 HSP90AA2PQ14568 343 aaPredicted RBP17.95■□□□□ 0.46
SYDE1-201ENST00000342784 MTUS2Q5JR59 1369 aa17.94■□□□□ 0.46
SYDE1-201ENST00000342784 CEP170Q5SW79 1584 aa17.94■□□□□ 0.46
SYDE1-201ENST00000342784 NAP1L5Q96NT1 182 aaPredicted RBP17.94■□□□□ 0.46
SYDE1-201ENST00000342784 KDM5BQ9UGL1 1544 aa17.93■□□□□ 0.46
SYDE1-201ENST00000342784 DCAF11Q8TEB1 546 aa17.92■□□□□ 0.46
SYDE1-201ENST00000342784 TAF7LQ5H9L4 462 aa17.92■□□□□ 0.46
SYDE1-201ENST00000342784 NAIPQ13075 1403 aa17.91■□□□□ 0.46
SYDE1-201ENST00000342784 SKAP1Q86WV1 359 aa17.91■□□□□ 0.46
SYDE1-201ENST00000342784 PNISRQ8TF01 805 aaKnown RBP17.9■□□□□ 0.46
SYDE1-201ENST00000342784 PTPN23Q9H3S7 1636 aa17.9■□□□□ 0.46
SYDE1-201ENST00000342784 PCF11O94913 1555 aaKnown RBP17.89■□□□□ 0.46
SYDE1-201ENST00000342784 PTPRKQ15262 1439 aa17.89■□□□□ 0.45
SYDE1-201ENST00000342784 EFCAB5A4FU69 1503 aa17.89■□□□□ 0.45
SYDE1-201ENST00000342784 CHD1O14646 1710 aa17.89■□□□□ 0.45
SYDE1-201ENST00000342784 ARXQ96QS3 562 aa17.87■□□□□ 0.45
SYDE1-201ENST00000342784 PRG4Q92954 1404 aaPredicted RBP17.86■□□□□ 0.45
SYDE1-201ENST00000342784 NBPF8Q3BBV2 869 aa17.86■□□□□ 0.45
SYDE1-201ENST00000342784 CARMIL2Q6F5E8 1435 aa17.86■□□□□ 0.45
SYDE1-201ENST00000342784 MPHOSPH9Q99550 1183 aa17.86■□□□□ 0.45
SYDE1-201ENST00000342784 HSP90AA1P07900 732 aaKnown RBP17.85■□□□□ 0.45
SYDE1-201ENST00000342784 CFAP43Q8NDM7 1665 aa17.85■□□□□ 0.45
SYDE1-201ENST00000342784 PNNQ9H307 717 aaKnown RBP17.85■□□□□ 0.45
SYDE1-201ENST00000342784 PLIN1O60240 522 aa17.84■□□□□ 0.45
SYDE1-201ENST00000342784 L1TD1Q5T7N2 865 aaKnown RBP17.84■□□□□ 0.45
SYDE1-201ENST00000342784 NUP160Q12769 1436 aa17.84■□□□□ 0.45
SYDE1-201ENST00000342784 PAXIP1Q6ZW49 1069 aaPredicted RBP17.83■□□□□ 0.45
SYDE1-201ENST00000342784 ZNF777Q9ULD5 760 aaPredicted RBP17.83■□□□□ 0.45
SYDE1-201ENST00000342784 RRAGDQ9NQL2 400 aaPredicted RBP17.83■□□□□ 0.44
SYDE1-201ENST00000342784 RRP9O43818 475 aaKnown RBP17.83■□□□□ 0.44
SYDE1-201ENST00000342784 CRBNQ96SW2 442 aa17.82■□□□□ 0.44
SYDE1-201ENST00000342784 CASKIN1Q8WXD9 1431 aa17.81■□□□□ 0.44
SYDE1-201ENST00000342784 DISP1Q96F81 1524 aa17.81■□□□□ 0.44
SYDE1-201ENST00000342784 FAM161AQ3B820 660 aa17.81■□□□□ 0.44
SYDE1-201ENST00000342784 SAMD9Q5K651 1589 aa17.8■□□□□ 0.44
SYDE1-201ENST00000342784 OSCARQ8IYS5 282 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms