RNA–Protein interactions for RNA: ENST00000342784.6

SYDE1-201, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYDE1, Length 3,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-201ENST00000342784 NISCHQ9Y2I1 1504 aa26.13■■□□□ 1.77
SYDE1-201ENST00000342784 PELP1Q8IZL8 1130 aaKnown RBP23.39■■□□□ 1.33
SYDE1-201ENST00000342784 HRCP23327 699 aa23.06■■□□□ 1.28
SYDE1-201ENST00000342784 MYT1Q01538 1121 aa22.84■■□□□ 1.25
SYDE1-201ENST00000342784 SHROOM4Q9ULL8 1493 aa22.8■■□□□ 1.24
SYDE1-201ENST00000342784 PCGF6Q9BYE7 350 aa22.58■■□□□ 1.21
SYDE1-201ENST00000342784 PPARGC1BQ86YN6 1023 aaKnown RBP22.58■■□□□ 1.2
SYDE1-201ENST00000342784 DCAF8L2P0C7V8 631 aa22.55■■□□□ 1.2
SYDE1-201ENST00000342784 CCDC180Q9P1Z9 1646 aa22.52■■□□□ 1.2
SYDE1-201ENST00000342784 SUPT5HO00267 1087 aaKnown RBP22.49■■□□□ 1.19
SYDE1-201ENST00000342784 ABCC9O60706 1549 aa22.04■■□□□ 1.12
SYDE1-201ENST00000342784 MYO15BQ96JP2 1530 aa22.01■■□□□ 1.11
SYDE1-201ENST00000342784 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
SYDE1-201ENST00000342784 SCAF1Q9H7N4 1312 aaKnown RBP21.91■■□□□ 1.1
SYDE1-201ENST00000342784 ZCCHC6Q5VYS8 1495 aaKnown RBP21.86■■□□□ 1.09
SYDE1-201ENST00000342784 TTBK1Q5TCY1 1321 aaPredicted RBP21.82■■□□□ 1.08
SYDE1-201ENST00000342784 TRIM26Q12899 539 aaPredicted RBP21.73■■□□□ 1.07
SYDE1-201ENST00000342784 ZEB1P37275 1124 aaPredicted RBP21.72■■□□□ 1.07
SYDE1-201ENST00000342784 DCAF1Q9Y4B6 1507 aa21.7■■□□□ 1.06
SYDE1-201ENST00000342784 PRKCSHP14314 528 aaPredicted RBP21.68■■□□□ 1.06
SYDE1-201ENST00000342784 EHMT2Q96KQ7 1210 aa21.68■■□□□ 1.06
SYDE1-201ENST00000342784 LOC105371045A0A1W2PR82 267 aa21.57■■□□□ 1.04
SYDE1-201ENST00000342784 BCL11AQ9H165 835 aa21.41■■□□□ 1.02
SYDE1-201ENST00000342784 ACIN1Q9UKV3 1341 aaKnown RBP21.38■■□□□ 1.01
SYDE1-201ENST00000342784 NEUROD1Q13562 356 aa21.28■■□□□ 1
SYDE1-201ENST00000342784 GTF3C3Q9Y5Q9 886 aa21.27■■□□□ 1
SYDE1-201ENST00000342784 CENPBP07199 599 aaPredicted RBP21.26■□□□□ 0.99
SYDE1-201ENST00000342784 FAM9AQ8IZU1 332 aaPredicted RBP21.22■□□□□ 0.99
SYDE1-201ENST00000342784 SCRIBQ14160 1630 aa21.22■□□□□ 0.99
SYDE1-201ENST00000342784 NACADO15069 1562 aa21.13■□□□□ 0.97
SYDE1-201ENST00000342784 RB1CC1Q8TDY2 1594 aa21.07■□□□□ 0.96
SYDE1-201ENST00000342784 PABPN1Q86U42 306 aaKnown RBP eCLIP21■□□□□ 0.95
SYDE1-201ENST00000342784 ERICH6Q7L0X2 663 aa20.97■□□□□ 0.95
SYDE1-201ENST00000342784 DIEXFQ68CQ4 756 aaKnown RBP20.95■□□□□ 0.94
SYDE1-201ENST00000342784 APLP2Q06481 763 aa20.9■□□□□ 0.94
SYDE1-201ENST00000342784 CCER1Q8TC90 406 aaPredicted RBP20.89■□□□□ 0.94
SYDE1-201ENST00000342784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.82■□□□□ 0.92
SYDE1-201ENST00000342784 YTHDC1Q96MU7 727 aaKnown RBP20.75■□□□□ 0.91
SYDE1-201ENST00000342784 TRIM41Q8WV44 630 aa20.71■□□□□ 0.91
SYDE1-201ENST00000342784 UNC13AQ9UPW8 1703 aa20.6■□□□□ 0.89
SYDE1-201ENST00000342784 CECR2Q9BXF3 1484 aa20.54■□□□□ 0.88
SYDE1-201ENST00000342784 ZNF316A6NFI3 1004 aaPredicted RBP20.45■□□□□ 0.86
SYDE1-201ENST00000342784 ANP32EQ9BTT0 268 aa20.43■□□□□ 0.86
SYDE1-201ENST00000342784 BICRAQ9NZM4 1560 aa20.4■□□□□ 0.86
SYDE1-201ENST00000342784 RSF1Q96T23 1441 aaPredicted RBP20.37■□□□□ 0.85
SYDE1-201ENST00000342784 CSRNP3Q8WYN3 585 aa20.34■□□□□ 0.85
SYDE1-201ENST00000342784 MROH2BQ7Z745 1585 aa20.32■□□□□ 0.84
SYDE1-201ENST00000342784 MIER1Q8N108 512 aa20.32■□□□□ 0.84
SYDE1-201ENST00000342784 SLC24A1O60721 1099 aa20.3■□□□□ 0.84
SYDE1-201ENST00000342784 RANGAP1P46060 587 aaPredicted RBP20.19■□□□□ 0.82
SYDE1-201ENST00000342784 WIZO95785 1651 aa20.17■□□□□ 0.82
SYDE1-201ENST00000342784 BAZ1AQ9NRL2 1556 aaPredicted RBP20.16■□□□□ 0.82
SYDE1-201ENST00000342784 CLSPNQ9HAW4 1339 aa20.13■□□□□ 0.81
SYDE1-201ENST00000342784 SUPT16HQ9Y5B9 1047 aaKnown RBP20.12■□□□□ 0.81
SYDE1-201ENST00000342784 SMARCA4P51532 1647 aa20.09■□□□□ 0.81
SYDE1-201ENST00000342784 TSHZ2Q9NRE2 1034 aa20.08■□□□□ 0.81
SYDE1-201ENST00000342784 ANO8Q9HCE9 1232 aaPredicted RBP20■□□□□ 0.79
SYDE1-201ENST00000342784 EIF4G1Q04637 1599 aaKnown RBP19.9■□□□□ 0.78
SYDE1-201ENST00000342784 HNRNPUL2Q1KMD3 747 aaKnown RBP19.88■□□□□ 0.77
SYDE1-201ENST00000342784 ATAD2BQ9ULI0 1458 aa19.85■□□□□ 0.77
SYDE1-201ENST00000342784 BAZ1BQ9UIG0 1483 aaKnown RBP19.83■□□□□ 0.77
SYDE1-201ENST00000342784 BCANQ96GW7 911 aa19.83■□□□□ 0.76
SYDE1-201ENST00000342784 EIF5BO60841 1220 aaKnown RBP19.81■□□□□ 0.76
SYDE1-201ENST00000342784 WRNQ14191 1432 aaPredicted RBP eCLIP19.77■□□□□ 0.76
SYDE1-201ENST00000342784 TOP2AP11388 1531 aaKnown RBP19.77■□□□□ 0.76
SYDE1-201ENST00000342784 CCDC88BA6NC98 1476 aa19.75■□□□□ 0.75
SYDE1-201ENST00000342784 SMARCA2P51531 1590 aa19.74■□□□□ 0.75
SYDE1-201ENST00000342784 CEP162Q5TB80 1403 aa19.72■□□□□ 0.75
SYDE1-201ENST00000342784 UBTFP17480 764 aaKnown RBP19.7■□□□□ 0.74
SYDE1-201ENST00000342784 CC2D2AQ9P2K1 1620 aa19.67■□□□□ 0.74
SYDE1-201ENST00000342784 UBE2Q2Q8WVN8 375 aa19.67■□□□□ 0.74
SYDE1-201ENST00000342784 FKBP8Q14318 412 aa19.65■□□□□ 0.74
SYDE1-201ENST00000342784 NEFLP07196 543 aa19.64■□□□□ 0.73
SYDE1-201ENST00000342784 RBM19Q9Y4C8 960 aaKnown RBP19.64■□□□□ 0.73
SYDE1-201ENST00000342784 DAXXQ9UER7 740 aaPredicted RBP19.62■□□□□ 0.73
SYDE1-201ENST00000342784 DNAJC5BQ9UF47 199 aa19.62■□□□□ 0.73
SYDE1-201ENST00000342784 PLEKHG5O94827 1062 aa19.6■□□□□ 0.73
SYDE1-201ENST00000342784 PEG3Q9GZU2 1588 aa19.59■□□□□ 0.73
SYDE1-201ENST00000342784 CCDC136Q96JN2 1154 aa19.57■□□□□ 0.72
SYDE1-201ENST00000342784 NCAPD3P42695 1498 aa19.57■□□□□ 0.72
SYDE1-201ENST00000342784 SALL2Q9Y467 1007 aaPredicted RBP19.57■□□□□ 0.72
SYDE1-201ENST00000342784 TNIKQ9UKE5 1360 aa19.54■□□□□ 0.72
SYDE1-201ENST00000342784 ABCC8Q09428 1581 aa19.47■□□□□ 0.71
SYDE1-201ENST00000342784 ITGAEP38570 1179 aa19.46■□□□□ 0.71
SYDE1-201ENST00000342784 HMGXB3Q12766 1538 aa19.44■□□□□ 0.7
SYDE1-201ENST00000342784 KCNH8Q96L42 1107 aa19.42■□□□□ 0.7
SYDE1-201ENST00000342784 MSH5O43196 834 aa19.37■□□□□ 0.69
SYDE1-201ENST00000342784 MYT1LQ9UL68 1186 aa19.35■□□□□ 0.69
SYDE1-201ENST00000342784 SOGA1O94964 1423 aa19.34■□□□□ 0.69
SYDE1-201ENST00000342784 PKNOX2Q96KN3 472 aa19.29■□□□□ 0.68
SYDE1-201ENST00000342784 CDK11AQ9UQ88 783 aaPredicted RBP19.29■□□□□ 0.68
SYDE1-201ENST00000342784 GOLGA3Q08378 1498 aa19.28■□□□□ 0.68
SYDE1-201ENST00000342784 NESP48681 1621 aa19.27■□□□□ 0.68
SYDE1-201ENST00000342784 DHX57Q6P158 1386 aaKnown RBP19.27■□□□□ 0.68
SYDE1-201ENST00000342784 DEKP35659 375 aaKnown RBP19.27■□□□□ 0.67
SYDE1-201ENST00000342784 EEA1Q15075 1411 aa19.26■□□□□ 0.67
SYDE1-201ENST00000342784 TRIM52Q96A61 297 aa19.26■□□□□ 0.67
SYDE1-201ENST00000342784 FANCIQ9NVI1 1328 aa19.25■□□□□ 0.67
SYDE1-201ENST00000342784 PODXL2Q9NZ53 605 aa19.25■□□□□ 0.67
SYDE1-201ENST00000342784 CADPSQ9ULU8 1353 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms