RNA–Protein interactions for RNA: ENST00000322147.8

LTBP3-202, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBP3, Length 4,046 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-202ENST00000322147 C14orf37Q86TY3 774 aa24.16■■□□□ 1.46
LTBP3-202ENST00000322147 ST20-MTHFSA0A0A6YYL1 179 aa24.16■■□□□ 1.46
LTBP3-202ENST00000322147 RTN4Q9NQC3 1192 aaKnown RBP24.16■■□□□ 1.46
LTBP3-202ENST00000322147 JPH4Q96JJ6 628 aa24.16■■□□□ 1.46
LTBP3-202ENST00000322147 STK26Q9P289 416 aa24.15■■□□□ 1.46
LTBP3-202ENST00000322147 PRKCSHP14314 528 aaPredicted RBP24.14■■□□□ 1.45
LTBP3-202ENST00000322147 ERICH3Q5RHP9 1530 aa24.13■■□□□ 1.45
LTBP3-202ENST00000322147 TMF1P82094 1093 aa24.12■■□□□ 1.45
LTBP3-202ENST00000322147 PDS5BQ9NTI5 1447 aa24.1■■□□□ 1.45
LTBP3-202ENST00000322147 DNAJC5BQ9UF47 199 aa24.08■■□□□ 1.45
LTBP3-202ENST00000322147 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.45
LTBP3-202ENST00000322147 ARID4BQ4LE39 1312 aaPredicted RBP24.07■■□□□ 1.44
LTBP3-202ENST00000322147 PAK3O75914 559 aaPredicted RBP24.07■■□□□ 1.44
LTBP3-202ENST00000322147 POGKQ9P215 609 aa24.06■■□□□ 1.44
LTBP3-202ENST00000322147 FGD5Q6ZNL6 1462 aa24.05■■□□□ 1.44
LTBP3-202ENST00000322147 PRKRIP1Q9H875 184 aaPredicted RBP24.04■■□□□ 1.44
LTBP3-202ENST00000322147 ROCK2O75116 1388 aaKnown RBP24.04■■□□□ 1.44
LTBP3-202ENST00000322147 CCDC146Q8IYE0 955 aa24.04■■□□□ 1.44
LTBP3-202ENST00000322147 CDCA8Q53HL2 280 aa24.03■■□□□ 1.44
LTBP3-202ENST00000322147 KIF3BO15066 747 aa24.02■■□□□ 1.44
LTBP3-202ENST00000322147 PLIN1O60240 522 aa24.02■■□□□ 1.44
LTBP3-202ENST00000322147 TOP2BQ02880 1626 aa24.01■■□□□ 1.43
LTBP3-202ENST00000322147 ANO8Q9HCE9 1232 aaPredicted RBP24■■□□□ 1.43
LTBP3-202ENST00000322147 FTSJ3Q8IY81 847 aaKnown RBP24■■□□□ 1.43
LTBP3-202ENST00000322147 TPRNQ4KMQ1 711 aa24■■□□□ 1.43
LTBP3-202ENST00000322147 CFAP53Q96M91 514 aa24■■□□□ 1.43
LTBP3-202ENST00000322147 RCAN3Q9UKA8 241 aa24■■□□□ 1.43
LTBP3-202ENST00000322147 CCDC184Q52MB2 194 aa23.99■■□□□ 1.43
LTBP3-202ENST00000322147 SRPK2P78362 688 aaKnown RBP23.99■■□□□ 1.43
LTBP3-202ENST00000322147 SPRYD3Q8NCJ5 442 aa23.97■■□□□ 1.43
LTBP3-202ENST00000322147 LRRC9Q6ZRR7 1453 aa23.97■■□□□ 1.43
LTBP3-202ENST00000322147 IPO9Q96P70 1041 aaKnown RBP23.95■■□□□ 1.43
LTBP3-202ENST00000322147 MORC1Q86VD1 984 aa23.94■■□□□ 1.42
LTBP3-202ENST00000322147 WASHC2AQ641Q2 1341 aa23.94■■□□□ 1.42
LTBP3-202ENST00000322147 ANKRD30AQ9BXX3 1397 aa23.94■■□□□ 1.42
LTBP3-202ENST00000322147 CLUAP1Q96AJ1 413 aa23.94■■□□□ 1.42
LTBP3-202ENST00000322147 CCDC18Q5T9S5 1454 aa23.93■■□□□ 1.42
LTBP3-202ENST00000322147 AQRO60306 1485 aaKnown RBP eCLIP23.9■■□□□ 1.422e-7■■■■□ 23.4
LTBP3-202ENST00000322147 A0A0G2JS52 829 aa23.9■■□□□ 1.42
LTBP3-202ENST00000322147 LMOD2Q6P5Q4 547 aa23.9■■□□□ 1.42
LTBP3-202ENST00000322147 MAPK8IP3Q9UPT6 1336 aa23.9■■□□□ 1.42
LTBP3-202ENST00000322147 TIAM1Q13009 1591 aa23.9■■□□□ 1.42
LTBP3-202ENST00000322147 EFCAB2Q5VUJ9 269 aa23.89■■□□□ 1.42
LTBP3-202ENST00000322147 PANK3Q9H999 370 aa23.89■■□□□ 1.42
LTBP3-202ENST00000322147 RRP7AQ9Y3A4 280 aaKnown RBP23.89■■□□□ 1.42
LTBP3-202ENST00000322147 KTN1Q86UP2 1357 aaKnown RBP23.89■■□□□ 1.41
LTBP3-202ENST00000322147 ZBED9Q6R2W3 1325 aa23.88■■□□□ 1.41
LTBP3-202ENST00000322147 CARMIL2Q6F5E8 1435 aa23.88■■□□□ 1.41
LTBP3-202ENST00000322147 TRAK1Q9UPV9 953 aa23.88■■□□□ 1.41
LTBP3-202ENST00000322147 NESP48681 1621 aa23.88■■□□□ 1.41
LTBP3-202ENST00000322147 NUDCQ9Y266 331 aa23.88■■□□□ 1.41
LTBP3-202ENST00000322147 U2AF1L5P0DN76 240 aaPredicted RBP23.86■■□□□ 1.41
LTBP3-202ENST00000322147 U2AF1Q01081 240 aaKnown RBP eCLIP23.86■■□□□ 1.41
LTBP3-202ENST00000322147 NUTM2FA1L443 756 aa23.85■■□□□ 1.41
LTBP3-202ENST00000322147 BCL2L13Q9BXK5 485 aa23.84■■□□□ 1.41
LTBP3-202ENST00000322147 FGD6Q6ZV73 1430 aa23.83■■□□□ 1.4
LTBP3-202ENST00000322147 MYH16Q9H6N6 1097 aa23.83■■□□□ 1.4
LTBP3-202ENST00000322147 APBB1O00213 710 aa23.82■■□□□ 1.4
LTBP3-202ENST00000322147 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.82■■□□□ 1.4
LTBP3-202ENST00000322147 IL27Q8NEV9 243 aa23.81■■□□□ 1.4
LTBP3-202ENST00000322147 EXOC6Q8TAG9 804 aa23.81■■□□□ 1.4
LTBP3-202ENST00000322147 NLRP13Q86W25 1043 aa23.81■■□□□ 1.4
LTBP3-202ENST00000322147 KIF7Q2M1P5 1343 aa23.8■■□□□ 1.4
LTBP3-202ENST00000322147 SLC4A3P48751 1232 aa23.8■■□□□ 1.4
LTBP3-202ENST00000322147 USP47Q96K76 1375 aa23.79■■□□□ 1.4
LTBP3-202ENST00000322147 GAPVD1Q14C86 1478 aa23.79■■□□□ 1.4
LTBP3-202ENST00000322147 NBPF8Q3BBV2 869 aa23.79■■□□□ 1.4
LTBP3-202ENST00000322147 SPAG9O60271 1321 aaKnown RBP23.77■■□□□ 1.4
LTBP3-202ENST00000322147 RALBP1Q15311 655 aa23.77■■□□□ 1.4
LTBP3-202ENST00000322147 DDRGK1Q96HY6 314 aa23.77■■□□□ 1.4
LTBP3-202ENST00000322147 UACAQ9BZF9 1416 aa23.75■■□□□ 1.39
LTBP3-202ENST00000322147 CUX1P39880 1505 aa23.75■■□□□ 1.39
LTBP3-202ENST00000322147 PEG3Q9GZU2 1588 aa23.75■■□□□ 1.39
LTBP3-202ENST00000322147 SLKQ9H2G2 1235 aaPredicted RBP23.75■■□□□ 1.39
LTBP3-202ENST00000322147 CNTLNQ9NXG0 1405 aa23.75■■□□□ 1.39
LTBP3-202ENST00000322147 NCAPD3P42695 1498 aa23.74■■□□□ 1.39
LTBP3-202ENST00000322147 NCLP19338 710 aaKnown RBP23.74■■□□□ 1.39
LTBP3-202ENST00000322147 BECN1Q14457 450 aa23.74■■□□□ 1.39
LTBP3-202ENST00000322147 AKNAQ7Z591 1439 aa23.72■■□□□ 1.39
LTBP3-202ENST00000322147 ANP32BQ92688 251 aaKnown RBP23.71■■□□□ 1.39
LTBP3-202ENST00000322147 CFTRP13569 1480 aa23.7■■□□□ 1.39
LTBP3-202ENST00000322147 KANK1Q14678 1352 aa23.7■■□□□ 1.38
LTBP3-202ENST00000322147 BIVM-ERCC5R4GMW8 1640 aa23.69■■□□□ 1.38
LTBP3-202ENST00000322147 ELL2O00472 640 aaPredicted RBP23.69■■□□□ 1.38
LTBP3-202ENST00000322147 NBPF1Q3BBV0 1214 aa23.68■■□□□ 1.38
LTBP3-202ENST00000322147 MAP3K1Q13233 1512 aa23.68■■□□□ 1.38
LTBP3-202ENST00000322147 C11orf95C9JLR9 678 aaPredicted RBP23.68■■□□□ 1.38
LTBP3-202ENST00000322147 GOLGA2Q08379 1002 aa23.68■■□□□ 1.38
LTBP3-202ENST00000322147 CCDC7Q96M83 1385 aa23.67■■□□□ 1.38
LTBP3-202ENST00000322147 APAF1O14727 1248 aa23.67■■□□□ 1.38
LTBP3-202ENST00000322147 MYOM3Q5VTT5 1437 aa23.67■■□□□ 1.38
LTBP3-202ENST00000322147 CDCA7LQ96GN5 454 aa23.67■■□□□ 1.38
LTBP3-202ENST00000322147 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.66■■□□□ 1.38
LTBP3-202ENST00000322147 TAOK2Q9UL54 1235 aa23.66■■□□□ 1.38
LTBP3-202ENST00000322147 PTPRGP23470 1445 aa23.65■■□□□ 1.38
LTBP3-202ENST00000322147 WASHC2CQ9Y4E1 1318 aa23.64■■□□□ 1.38
LTBP3-202ENST00000322147 AFAP1Q8N556 730 aa23.64■■□□□ 1.38
LTBP3-202ENST00000322147 NCOA2Q15596 1464 aa23.64■■□□□ 1.37
LTBP3-202ENST00000322147 CCDC144AA2RUR9 1427 aa23.63■■□□□ 1.37
LTBP3-202ENST00000322147 CRBNQ96SW2 442 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms