RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 JPH4Q96JJ6 628 aa20.11■□□□□ 0.81
SCAP-202ENST00000320017 TIAM1Q13009 1591 aa20.11■□□□□ 0.81
SCAP-202ENST00000320017 C11orf95C9JLR9 678 aaPredicted RBP20.11■□□□□ 0.81
SCAP-202ENST00000320017 CUL7Q14999 1698 aa20.09■□□□□ 0.81
SCAP-202ENST00000320017 CASKIN1Q8WXD9 1431 aa20.09■□□□□ 0.81
SCAP-202ENST00000320017 RSPH6AQ9H0K4 717 aa20.09■□□□□ 0.81
SCAP-202ENST00000320017 HSPA5P11021 654 aaKnown RBP20.08■□□□□ 0.8
SCAP-202ENST00000320017 DAXXQ9UER7 740 aaPredicted RBP20.07■□□□□ 0.8
SCAP-202ENST00000320017 WASHC2CQ9Y4E1 1318 aa20.06■□□□□ 0.8
SCAP-202ENST00000320017 ABCA5Q8WWZ7 1642 aa20.06■□□□□ 0.8
SCAP-202ENST00000320017 TARBP1Q13395 1621 aaKnown RBP20.06■□□□□ 0.8
SCAP-202ENST00000320017 PLEKHG5O94827 1062 aa20.05■□□□□ 0.8
SCAP-202ENST00000320017 FRAT1Q92837 279 aaPredicted RBP20.05■□□□□ 0.8
SCAP-202ENST00000320017 ZMYND15Q9H091 742 aa20.02■□□□□ 0.8
SCAP-202ENST00000320017 FYCO1Q9BQS8 1478 aa20.01■□□□□ 0.79
SCAP-202ENST00000320017 ZNF644Q9H582 1327 aaPredicted RBP20.01■□□□□ 0.79
SCAP-202ENST00000320017 SLC4A3P48751 1232 aa20■□□□□ 0.79
SCAP-202ENST00000320017 PODXL2Q9NZ53 605 aa20■□□□□ 0.79
SCAP-202ENST00000320017 EFCAB5A4FU69 1503 aa19.99■□□□□ 0.79
SCAP-202ENST00000320017 AKNAQ7Z591 1439 aa19.99■□□□□ 0.79
SCAP-202ENST00000320017 PTPRKQ15262 1439 aa19.98■□□□□ 0.79
SCAP-202ENST00000320017 CDK13Q14004 1512 aaKnown RBP19.98■□□□□ 0.79
SCAP-202ENST00000320017 ZBED9Q6R2W3 1325 aa19.96■□□□□ 0.79
SCAP-202ENST00000320017 NFKBIBQ15653 356 aa19.95■□□□□ 0.78
SCAP-202ENST00000320017 ARXQ96QS3 562 aa19.95■□□□□ 0.78
SCAP-202ENST00000320017 PDE4AP27815 886 aa19.95■□□□□ 0.78
SCAP-202ENST00000320017 L3MBTL2Q969R5 705 aa19.95■□□□□ 0.78
SCAP-202ENST00000320017 CCDC18Q5T9S5 1454 aa19.95■□□□□ 0.78
SCAP-202ENST00000320017 EIF4G2P78344 907 aaKnown RBP eCLIP19.94■□□□□ 0.78
SCAP-202ENST00000320017 FGD6Q6ZV73 1430 aa19.94■□□□□ 0.78
SCAP-202ENST00000320017 IQGAP2Q13576 1575 aa19.94■□□□□ 0.78
SCAP-202ENST00000320017 CFDP1Q9UEE9 299 aaPredicted RBP19.94■□□□□ 0.78
SCAP-202ENST00000320017 NCOA2Q15596 1464 aa19.94■□□□□ 0.78
SCAP-202ENST00000320017 WDR62O43379 1518 aa19.93■□□□□ 0.78
SCAP-202ENST00000320017 GRIN2AQ12879 1464 aa19.93■□□□□ 0.78
SCAP-202ENST00000320017 CTTNBP2Q8WZ74 1663 aa19.92■□□□□ 0.78
SCAP-202ENST00000320017 PLEKHD1A6NEE1 506 aa19.92■□□□□ 0.78
SCAP-202ENST00000320017 NAP1L5Q96NT1 182 aaPredicted RBP19.91■□□□□ 0.78
SCAP-202ENST00000320017 ADAMTS12P58397 1594 aa19.9■□□□□ 0.78
SCAP-202ENST00000320017 EIF4G3O43432 1585 aaKnown RBP19.89■□□□□ 0.78
SCAP-202ENST00000320017 PBRM1Q86U86 1689 aa19.88■□□□□ 0.77
SCAP-202ENST00000320017 KIAA0586Q9BVV6 1533 aa19.87■□□□□ 0.77
SCAP-202ENST00000320017 FAM43AQ8N2R8 423 aa19.87■□□□□ 0.77
SCAP-202ENST00000320017 MPHOSPH9Q99550 1183 aa19.87■□□□□ 0.77
SCAP-202ENST00000320017 PLB1Q6P1J6 1458 aa19.86■□□□□ 0.77
SCAP-202ENST00000320017 MYOM3Q5VTT5 1437 aa19.85■□□□□ 0.77
SCAP-202ENST00000320017 CARMIL2Q6F5E8 1435 aa19.85■□□□□ 0.77
SCAP-202ENST00000320017 SLC4A1APQ9BWU0 796 aaKnown RBP19.85■□□□□ 0.77
SCAP-202ENST00000320017 NUDCQ9Y266 331 aa19.85■□□□□ 0.77
SCAP-202ENST00000320017 TCERG1O14776 1098 aaKnown RBP19.84■□□□□ 0.77
SCAP-202ENST00000320017 DDRGK1Q96HY6 314 aa19.84■□□□□ 0.77
SCAP-202ENST00000320017 PRKRIP1Q9H875 184 aaPredicted RBP19.84■□□□□ 0.77
SCAP-202ENST00000320017 EPRSP07814 1512 aaKnown RBP19.84■□□□□ 0.77
SCAP-202ENST00000320017 PRG4Q92954 1404 aaPredicted RBP19.83■□□□□ 0.77
SCAP-202ENST00000320017 HSP90AA2PQ14568 343 aaPredicted RBP19.82■□□□□ 0.76
SCAP-202ENST00000320017 SYNJ2O15056 1496 aa19.82■□□□□ 0.76
SCAP-202ENST00000320017 NBPF8Q3BBV2 869 aa19.81■□□□□ 0.76
SCAP-202ENST00000320017 MAP3K1Q13233 1512 aa19.81■□□□□ 0.76
SCAP-202ENST00000320017 ARID4BQ4LE39 1312 aaPredicted RBP19.81■□□□□ 0.76
SCAP-202ENST00000320017 SKAP1Q86WV1 359 aa19.8■□□□□ 0.76
SCAP-202ENST00000320017 DCAF11Q8TEB1 546 aa19.8■□□□□ 0.76
SCAP-202ENST00000320017 KDM2AQ9Y2K7 1162 aa19.8■□□□□ 0.76
SCAP-202ENST00000320017 EXOC6Q8TAG9 804 aa19.79■□□□□ 0.76
SCAP-202ENST00000320017 BACH2Q9BYV9 841 aa19.79■□□□□ 0.76
SCAP-202ENST00000320017 NAIPQ13075 1403 aa19.79■□□□□ 0.76
SCAP-202ENST00000320017 FRAT2O75474 233 aaPredicted RBP19.79■□□□□ 0.76
SCAP-202ENST00000320017 UACAQ9BZF9 1416 aa19.78■□□□□ 0.76
SCAP-202ENST00000320017 MAGI1Q96QZ7 1491 aaPredicted RBP19.76■□□□□ 0.75
SCAP-202ENST00000320017 SAMD9Q5K651 1589 aa19.76■□□□□ 0.75
SCAP-202ENST00000320017 MAGI3Q5TCQ9 1506 aa19.76■□□□□ 0.75
SCAP-202ENST00000320017 PTPRGP23470 1445 aa19.75■□□□□ 0.75
SCAP-202ENST00000320017 DISP1Q96F81 1524 aa19.75■□□□□ 0.75
SCAP-202ENST00000320017 THOC2Q8NI27 1593 aaKnown RBP19.75■□□□□ 0.75
SCAP-202ENST00000320017 A0A0U1RQG5 324 aaPredicted RBP19.75■□□□□ 0.75
SCAP-202ENST00000320017 HSP90AA1P07900 732 aaKnown RBP19.75■□□□□ 0.75
SCAP-202ENST00000320017 HNRNPMP52272 730 aaKnown RBP eCLIP19.74■□□□□ 0.752e-7■■■■■ 28.9
SCAP-202ENST00000320017 HFM1A2PYH4 1435 aa19.72■□□□□ 0.75
SCAP-202ENST00000320017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.72■□□□□ 0.75
SCAP-202ENST00000320017 RRAGDQ9NQL2 400 aaPredicted RBP19.72■□□□□ 0.75
SCAP-202ENST00000320017 CFAP43Q8NDM7 1665 aa19.71■□□□□ 0.75
SCAP-202ENST00000320017 PNNQ9H307 717 aaKnown RBP19.71■□□□□ 0.75
SCAP-202ENST00000320017 NUP153P49790 1475 aaKnown RBP19.7■□□□□ 0.74
SCAP-202ENST00000320017 TSPY4P0CV99 314 aa19.7■□□□□ 0.74
SCAP-202ENST00000320017 TSPY10P0CW01 314 aa19.7■□□□□ 0.74
SCAP-202ENST00000320017 EHBP1L1Q8N3D4 1523 aa19.69■□□□□ 0.74
SCAP-202ENST00000320017 HECW1Q76N89 1606 aa19.69■□□□□ 0.74
SCAP-202ENST00000320017 CEP170Q5SW79 1584 aa19.69■□□□□ 0.74
SCAP-202ENST00000320017 SMG6Q86US8 1419 aaKnown RBP19.68■□□□□ 0.74
SCAP-202ENST00000320017 CNTLNQ9NXG0 1405 aa19.67■□□□□ 0.74
SCAP-202ENST00000320017 UGGT2Q9NYU1 1516 aa19.66■□□□□ 0.74
SCAP-202ENST00000320017 KIF7Q2M1P5 1343 aa19.66■□□□□ 0.74
SCAP-202ENST00000320017 KIAA0556O60303 1618 aa19.65■□□□□ 0.74
SCAP-202ENST00000320017 SUPT6HQ7KZ85 1726 aaKnown RBP19.65■□□□□ 0.74
SCAP-202ENST00000320017 PTPN23Q9H3S7 1636 aa19.63■□□□□ 0.73
SCAP-202ENST00000320017 MS4A1P11836 297 aa19.63■□□□□ 0.73
SCAP-202ENST00000320017 CCDC7Q96M83 1385 aa19.63■□□□□ 0.73
SCAP-202ENST00000320017 TMC1Q8TDI8 760 aa19.62■□□□□ 0.73
SCAP-202ENST00000320017 RRP1P56182 461 aaKnown RBP19.62■□□□□ 0.73
SCAP-202ENST00000320017 POGKQ9P215 609 aa19.61■□□□□ 0.73
SCAP-202ENST00000320017 NUP160Q12769 1436 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms