RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 GLIPR1L2Q4G1C9 344 aa17.06■□□□□ 0.32
TRIM35-201ENST00000305364 CC2D1BQ5T0F9 858 aaKnown RBP17.06■□□□□ 0.32
TRIM35-201ENST00000305364 MS4A1P11836 297 aa17.05■□□□□ 0.32
TRIM35-201ENST00000305364 MYOM3Q5VTT5 1437 aa17.05■□□□□ 0.32
TRIM35-201ENST00000305364 CASKIN1Q8WXD9 1431 aa17.05■□□□□ 0.32
TRIM35-201ENST00000305364 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.04■□□□□ 0.32
TRIM35-201ENST00000305364 WDR43Q15061 677 aaKnown RBP eCLIP17.04■□□□□ 0.32
TRIM35-201ENST00000305364 NFKBIBQ15653 356 aa17.04■□□□□ 0.32
TRIM35-201ENST00000305364 BACH2Q9BYV9 841 aa17.03■□□□□ 0.32
TRIM35-201ENST00000305364 PCF11O94913 1555 aaKnown RBP17.02■□□□□ 0.32
TRIM35-201ENST00000305364 FYCO1Q9BQS8 1478 aa17.02■□□□□ 0.31
TRIM35-201ENST00000305364 PEG3Q9GZU2 1588 aa17.02■□□□□ 0.31
TRIM35-201ENST00000305364 BIVM-ERCC5R4GMW8 1640 aa17.01■□□□□ 0.31
TRIM35-201ENST00000305364 PKD2Q13563 968 aa17.01■□□□□ 0.31
TRIM35-201ENST00000305364 RALBP1Q15311 655 aa17.01■□□□□ 0.31
TRIM35-201ENST00000305364 USP47Q96K76 1375 aa17.01■□□□□ 0.31
TRIM35-201ENST00000305364 UPF2Q9HAU5 1272 aaKnown RBP17.01■□□□□ 0.31
TRIM35-201ENST00000305364 NCOA2Q15596 1464 aa17.01■□□□□ 0.31
TRIM35-201ENST00000305364 FGD5Q6ZNL6 1462 aa17■□□□□ 0.31
TRIM35-201ENST00000305364 RGL3Q3MIN7 710 aa17■□□□□ 0.31
TRIM35-201ENST00000305364 PNISRQ8TF01 805 aaKnown RBP17■□□□□ 0.31
TRIM35-201ENST00000305364 CRBNQ96SW2 442 aa17■□□□□ 0.31
TRIM35-201ENST00000305364 DCAF11Q8TEB1 546 aa16.99■□□□□ 0.31
TRIM35-201ENST00000305364 FRAT1Q92837 279 aaPredicted RBP16.99■□□□□ 0.31
TRIM35-201ENST00000305364 BECN1Q14457 450 aa16.98■□□□□ 0.31
TRIM35-201ENST00000305364 MYBBP1AQ9BQG0 1328 aaKnown RBP16.98■□□□□ 0.31
TRIM35-201ENST00000305364 PDE3BQ13370 1112 aa16.98■□□□□ 0.31
TRIM35-201ENST00000305364 CFDP1Q9UEE9 299 aaPredicted RBP16.97■□□□□ 0.31
TRIM35-201ENST00000305364 PTPRKQ15262 1439 aa16.97■□□□□ 0.31
TRIM35-201ENST00000305364 NCOA1Q15788 1441 aa16.97■□□□□ 0.31
TRIM35-201ENST00000305364 NLRP13Q86W25 1043 aa16.97■□□□□ 0.31
TRIM35-201ENST00000305364 KIF15Q9NS87 1388 aa16.97■□□□□ 0.31
TRIM35-201ENST00000305364 ST20-MTHFSA0A0A6YYL1 179 aa16.97■□□□□ 0.31
TRIM35-201ENST00000305364 SKAP1Q86WV1 359 aa16.97■□□□□ 0.31
TRIM35-201ENST00000305364 CHMP7Q8WUX9 453 aaPredicted RBP16.97■□□□□ 0.31
TRIM35-201ENST00000305364 UNC13AQ9UPW8 1703 aa16.96■□□□□ 0.31
TRIM35-201ENST00000305364 NAP1L5Q96NT1 182 aaPredicted RBP16.95■□□□□ 0.3
TRIM35-201ENST00000305364 AQRO60306 1485 aaKnown RBP eCLIP16.95■□□□□ 0.32e-6■■■■■ 30.7
TRIM35-201ENST00000305364 KTN1Q86UP2 1357 aaKnown RBP16.95■□□□□ 0.3
TRIM35-201ENST00000305364 CDCA7LQ96GN5 454 aa16.95■□□□□ 0.3
TRIM35-201ENST00000305364 CFTRP13569 1480 aa16.95■□□□□ 0.3
TRIM35-201ENST00000305364 SLKQ9H2G2 1235 aaPredicted RBP16.94■□□□□ 0.3
TRIM35-201ENST00000305364 BICRAQ9NZM4 1560 aa16.94■□□□□ 0.3
TRIM35-201ENST00000305364 ROCK2O75116 1388 aaKnown RBP16.94■□□□□ 0.3
TRIM35-201ENST00000305364 CADPSQ9ULU8 1353 aa16.94■□□□□ 0.3
TRIM35-201ENST00000305364 TDRD9Q8NDG6 1382 aaKnown RBP16.92■□□□□ 0.3
TRIM35-201ENST00000305364 PTPN23Q9H3S7 1636 aa16.92■□□□□ 0.3
TRIM35-201ENST00000305364 TSPY4P0CV99 314 aa16.91■□□□□ 0.3
TRIM35-201ENST00000305364 TSPY10P0CW01 314 aa16.91■□□□□ 0.3
TRIM35-201ENST00000305364 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.91■□□□□ 0.3
TRIM35-201ENST00000305364 FAM161AQ3B820 660 aa16.91■□□□□ 0.3
TRIM35-201ENST00000305364 RSPH6AQ9H0K4 717 aa16.9■□□□□ 0.3
TRIM35-201ENST00000305364 FRAT2O75474 233 aaPredicted RBP16.9■□□□□ 0.3
TRIM35-201ENST00000305364 RAD54L2Q9Y4B4 1467 aa16.89■□□□□ 0.29
TRIM35-201ENST00000305364 CENPQQ7L2Z9 268 aaPredicted RBP16.86■□□□□ 0.29
TRIM35-201ENST00000305364 ZNF644Q9H582 1327 aaPredicted RBP16.86■□□□□ 0.29
TRIM35-201ENST00000305364 SPRYD3Q8NCJ5 442 aa16.86■□□□□ 0.29
TRIM35-201ENST00000305364 NCAPD3P42695 1498 aa16.86■□□□□ 0.29
TRIM35-201ENST00000305364 L1TD1Q5T7N2 865 aaKnown RBP16.85■□□□□ 0.29
TRIM35-201ENST00000305364 KNSTRNQ9Y448 316 aa16.85■□□□□ 0.29
TRIM35-201ENST00000305364 BRD4O60885 1362 aaPredicted RBP16.85■□□□□ 0.29
TRIM35-201ENST00000305364 GZF1Q9H116 711 aaPredicted RBP16.84■□□□□ 0.29
TRIM35-201ENST00000305364 NPM1P06748 294 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRIM35-201ENST00000305364 EFCAB5A4FU69 1503 aa16.83■□□□□ 0.28
TRIM35-201ENST00000305364 ARID4BQ4LE39 1312 aaPredicted RBP16.82■□□□□ 0.28
TRIM35-201ENST00000305364 NUP155O75694 1391 aa16.81■□□□□ 0.28
TRIM35-201ENST00000305364 PNNQ9H307 717 aaKnown RBP16.81■□□□□ 0.28
TRIM35-201ENST00000305364 ANKRD30BQ9BXX2 1392 aa16.8■□□□□ 0.28
TRIM35-201ENST00000305364 HSP90AA1P07900 732 aaKnown RBP16.8■□□□□ 0.28
TRIM35-201ENST00000305364 RNF123Q5XPI4 1314 aa16.8■□□□□ 0.28
TRIM35-201ENST00000305364 TRIM44Q96DX7 344 aaPredicted RBP16.79■□□□□ 0.28
TRIM35-201ENST00000305364 GOLGA2Q08379 1002 aa16.78■□□□□ 0.28
TRIM35-201ENST00000305364 NEUROD2Q15784 382 aa16.78■□□□□ 0.28
TRIM35-201ENST00000305364 WASHC2CQ9Y4E1 1318 aa16.78■□□□□ 0.28
TRIM35-201ENST00000305364 TMF1P82094 1093 aa16.77■□□□□ 0.28
TRIM35-201ENST00000305364 CFAP43Q8NDM7 1665 aa16.77■□□□□ 0.28
TRIM35-201ENST00000305364 UBE2Q2Q8WVN8 375 aa16.77■□□□□ 0.27
TRIM35-201ENST00000305364 PANK3Q9H999 370 aa16.76■□□□□ 0.27
TRIM35-201ENST00000305364 FANCD2Q9BXW9 1451 aa16.76■□□□□ 0.27
TRIM35-201ENST00000305364 FAM43AQ8N2R8 423 aa16.75■□□□□ 0.27
TRIM35-201ENST00000305364 MIA2Q96PC5 1412 aa16.75■□□□□ 0.27
TRIM35-201ENST00000305364 C20orf194Q5TEA3 1177 aa16.75■□□□□ 0.27
TRIM35-201ENST00000305364 ANP32BQ92688 251 aaKnown RBP16.75■□□□□ 0.27
TRIM35-201ENST00000305364 SUPT6HQ7KZ85 1726 aaKnown RBP16.75■□□□□ 0.27
TRIM35-201ENST00000305364 EHBP1L1Q8N3D4 1523 aa16.75■□□□□ 0.27
TRIM35-201ENST00000305364 RPRD2Q5VT52 1461 aaKnown RBP16.74■□□□□ 0.27
TRIM35-201ENST00000305364 GOLGA6L3A6NEY3 463 aa16.74■□□□□ 0.27
TRIM35-201ENST00000305364 PLPPR3Q6T4P5 718 aa16.74■□□□□ 0.27
TRIM35-201ENST00000305364 CCDC146Q8IYE0 955 aa16.74■□□□□ 0.27
TRIM35-201ENST00000305364 VSIG10Q8N0Z9 540 aa16.72■□□□□ 0.27
TRIM35-201ENST00000305364 ANKRD30AQ9BXX3 1397 aa16.72■□□□□ 0.27
TRIM35-201ENST00000305364 DHX29Q7Z478 1369 aaKnown RBP16.72■□□□□ 0.27
TRIM35-201ENST00000305364 ERCC6Q03468 1493 aa16.71■□□□□ 0.27
TRIM35-201ENST00000305364 PLEKHD1A6NEE1 506 aa16.71■□□□□ 0.27
TRIM35-201ENST00000305364 ADAMTS8Q9UP79 889 aa16.7■□□□□ 0.26
TRIM35-201ENST00000305364 HMGXB3Q12766 1538 aa16.69■□□□□ 0.26
TRIM35-201ENST00000305364 HSP90AA2PQ14568 343 aaPredicted RBP16.69■□□□□ 0.26
TRIM35-201ENST00000305364 POGKQ9P215 609 aa16.69■□□□□ 0.26
TRIM35-201ENST00000305364 COG6Q9Y2V7 657 aa16.65■□□□□ 0.26
TRIM35-201ENST00000305364 DAPK1P53355 1430 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms