RNA–Protein interactions for RNA: ENST00000282878.5

RAB3C-201, Transcript of RAB3C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3C, Length 8,896 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-201ENST00000282878 TAF7LQ5H9L4 462 aa5.11□□□□□ -1.59
RAB3C-201ENST00000282878 LRRC9Q6ZRR7 1453 aa5.11□□□□□ -1.59
RAB3C-201ENST00000282878 SUPT16HQ9Y5B9 1047 aaKnown RBP5.1□□□□□ -1.59
RAB3C-201ENST00000282878 TOP2BQ02880 1626 aa5.1□□□□□ -1.59
RAB3C-201ENST00000282878 ANP32CO43423 234 aa5.1□□□□□ -1.59
RAB3C-201ENST00000282878 PTMSP20962 102 aa5.1□□□□□ -1.59
RAB3C-201ENST00000282878 BRD2P25440 801 aaKnown RBP5.1□□□□□ -1.59
RAB3C-201ENST00000282878 CDK13Q14004 1512 aaKnown RBP5.1□□□□□ -1.59
RAB3C-201ENST00000282878 RRBP1Q9P2E9 1410 aaKnown RBP5.1□□□□□ -1.59
RAB3C-201ENST00000282878 CLSPNQ9HAW4 1339 aa5.09□□□□□ -1.59
RAB3C-201ENST00000282878 RTL5Q5HYW3 569 aaPredicted RBP5.09□□□□□ -1.59
RAB3C-201ENST00000282878 LAMC3Q9Y6N6 1575 aa5.09□□□□□ -1.59
RAB3C-201ENST00000282878 DCAF11Q8TEB1 546 aa5.09□□□□□ -1.6
RAB3C-201ENST00000282878 USP35Q9P2H5 1018 aa5.09□□□□□ -1.6
RAB3C-201ENST00000282878 ADRA2BP18089 450 aa5.08□□□□□ -1.6
RAB3C-201ENST00000282878 PLB1Q6P1J6 1458 aa5.08□□□□□ -1.6
RAB3C-201ENST00000282878 NBPF1Q3BBV0 1214 aa5.08□□□□□ -1.6
RAB3C-201ENST00000282878 NCOA2Q15596 1464 aa5.08□□□□□ -1.6
RAB3C-201ENST00000282878 FGD6Q6ZV73 1430 aa5.07□□□□□ -1.6
RAB3C-201ENST00000282878 AFAP1Q8N556 730 aa5.07□□□□□ -1.6
RAB3C-201ENST00000282878 PDE4CQ08493 712 aa5.07□□□□□ -1.6
RAB3C-201ENST00000282878 SNAPC4Q5SXM2 1469 aa5.07□□□□□ -1.6
RAB3C-201ENST00000282878 MRS2Q9HD23 443 aa5.07□□□□□ -1.6
RAB3C-201ENST00000282878 CC2D1BQ5T0F9 858 aaKnown RBP5.06□□□□□ -1.6
RAB3C-201ENST00000282878 SKAP1Q86WV1 359 aa5.06□□□□□ -1.6
RAB3C-201ENST00000282878 TSPY4P0CV99 314 aa5.06□□□□□ -1.6
RAB3C-201ENST00000282878 TSPY10P0CW01 314 aa5.06□□□□□ -1.6
RAB3C-201ENST00000282878 WASHC2AQ641Q2 1341 aa5.06□□□□□ -1.6
RAB3C-201ENST00000282878 SAFB2Q14151 953 aaKnown RBP eCLIP5.06□□□□□ -1.6
RAB3C-201ENST00000282878 EIF4G2P78344 907 aaKnown RBP eCLIP5.05□□□□□ -1.6
RAB3C-201ENST00000282878 CARD11Q9BXL7 1154 aa5.05□□□□□ -1.6
RAB3C-201ENST00000282878 ABCA10Q8WWZ4 1543 aa5.05□□□□□ -1.6
RAB3C-201ENST00000282878 PLEKHG5O94827 1062 aa5.05□□□□□ -1.6
RAB3C-201ENST00000282878 PPM1GO15355 546 aaPredicted RBP5.05□□□□□ -1.6
RAB3C-201ENST00000282878 MLECQ14165 292 aa5.05□□□□□ -1.6
RAB3C-201ENST00000282878 FHAD1B1AJZ9 1412 aa5.05□□□□□ -1.6
RAB3C-201ENST00000282878 CASKIN1Q8WXD9 1431 aa5.04□□□□□ -1.6
RAB3C-201ENST00000282878 TNNT2P45379 298 aaPredicted RBP5.04□□□□□ -1.6
RAB3C-201ENST00000282878 PSMD1Q99460 953 aa5.04□□□□□ -1.6
RAB3C-201ENST00000282878 NUP155O75694 1391 aa5.04□□□□□ -1.6
RAB3C-201ENST00000282878 GGT6Q6P531 493 aa5.04□□□□□ -1.6
RAB3C-201ENST00000282878 SPRYD3Q8NCJ5 442 aa5.03□□□□□ -1.6
RAB3C-201ENST00000282878 MAPKBP1O60336 1514 aa5.03□□□□□ -1.6
RAB3C-201ENST00000282878 ST20-MTHFSA0A0A6YYL1 179 aa5.03□□□□□ -1.6
RAB3C-201ENST00000282878 BIVM-ERCC5R4GMW8 1640 aa5.03□□□□□ -1.6
RAB3C-201ENST00000282878 FMN1Q68DA7 1419 aa5.03□□□□□ -1.6
RAB3C-201ENST00000282878 ZNF526Q8TF50 670 aaPredicted RBP5.03□□□□□ -1.6
RAB3C-201ENST00000282878 NAIPQ13075 1403 aa5.03□□□□□ -1.6
RAB3C-201ENST00000282878 MAGI3Q5TCQ9 1506 aa5.03□□□□□ -1.6
RAB3C-201ENST00000282878 MYOM3Q5VTT5 1437 aa5.02□□□□□ -1.61
RAB3C-201ENST00000282878 PCF11O94913 1555 aaKnown RBP5.02□□□□□ -1.61
RAB3C-201ENST00000282878 B4GALNT3Q6L9W6 998 aa5.02□□□□□ -1.61
RAB3C-201ENST00000282878 NAP1L5Q96NT1 182 aaPredicted RBP5.02□□□□□ -1.61
RAB3C-201ENST00000282878 PTPRGP23470 1445 aa5.02□□□□□ -1.61
RAB3C-201ENST00000282878 CCDC18Q5T9S5 1454 aa5.02□□□□□ -1.61
RAB3C-201ENST00000282878 CYB5RLQ6IPT4 315 aa5.02□□□□□ -1.61
RAB3C-201ENST00000282878 KIF7Q2M1P5 1343 aa5.02□□□□□ -1.61
RAB3C-201ENST00000282878 TSHZ2Q9NRE2 1034 aa5.02□□□□□ -1.61
RAB3C-201ENST00000282878 ERICH3Q5RHP9 1530 aa5.01□□□□□ -1.61
RAB3C-201ENST00000282878 FOXD4L1Q9NU39 408 aa5.01□□□□□ -1.61
RAB3C-201ENST00000282878 WDR97A6NE52 1622 aa5.01□□□□□ -1.61
RAB3C-201ENST00000282878 KIF3BO15066 747 aa5.01□□□□□ -1.61
RAB3C-201ENST00000282878 MRC2Q9UBG0 1479 aa5.01□□□□□ -1.61
RAB3C-201ENST00000282878 ABCC5O15440 1437 aa5.01□□□□□ -1.61
RAB3C-201ENST00000282878 DNMBPQ6XZF7 1577 aa5□□□□□ -1.61
RAB3C-201ENST00000282878 CLSTN1O94985 981 aa5□□□□□ -1.61
RAB3C-201ENST00000282878 A0A0U1RQG5 324 aaPredicted RBP5□□□□□ -1.61
RAB3C-201ENST00000282878 NEUROD2Q15784 382 aa5□□□□□ -1.61
RAB3C-201ENST00000282878 CHMP4AQ9BY43 222 aa5□□□□□ -1.61
RAB3C-201ENST00000282878 TIAM1Q13009 1591 aa4.99□□□□□ -1.61
RAB3C-201ENST00000282878 PKNOX2Q96KN3 472 aa4.99□□□□□ -1.61
RAB3C-201ENST00000282878 GRIN2BQ13224 1484 aa4.99□□□□□ -1.61
RAB3C-201ENST00000282878 RBM25P49756 843 aaKnown RBP4.99□□□□□ -1.61
RAB3C-201ENST00000282878 TMEM132EQ6IEE7 984 aa4.99□□□□□ -1.61
RAB3C-201ENST00000282878 PPP4R3CPQ6ZMV5 832 aa4.99□□□□□ -1.61
RAB3C-201ENST00000282878 PLIN1O60240 522 aa4.99□□□□□ -1.61
RAB3C-201ENST00000282878 AEBP1Q8IUX7 1158 aa4.99□□□□□ -1.61
RAB3C-201ENST00000282878 RAPGEF3O95398 923 aa4.99□□□□□ -1.61
RAB3C-201ENST00000282878 CCDC146Q8IYE0 955 aa4.98□□□□□ -1.61
RAB3C-201ENST00000282878 CDCA7LQ96GN5 454 aa4.98□□□□□ -1.61
RAB3C-201ENST00000282878 PRKRIP1Q9H875 184 aaPredicted RBP4.98□□□□□ -1.61
RAB3C-201ENST00000282878 STK26Q9P289 416 aa4.98□□□□□ -1.61
RAB3C-201ENST00000282878 HMGB1P1B2RPK0 211 aaPredicted RBP4.98□□□□□ -1.61
RAB3C-201ENST00000282878 UBE2Q2Q8WVN8 375 aa4.98□□□□□ -1.61
RAB3C-201ENST00000282878 EPRSP07814 1512 aaKnown RBP4.97□□□□□ -1.61
RAB3C-201ENST00000282878 ARHGEF11O15085 1522 aa4.97□□□□□ -1.61
RAB3C-201ENST00000282878 NUP153P49790 1475 aaKnown RBP4.97□□□□□ -1.61
RAB3C-201ENST00000282878 NUTM2FA1L443 756 aa4.97□□□□□ -1.61
RAB3C-201ENST00000282878 CFAP70Q5T0N1 1121 aa4.97□□□□□ -1.61
RAB3C-201ENST00000282878 BBXQ8WY36 941 aaPredicted RBP4.97□□□□□ -1.61
RAB3C-201ENST00000282878 LAS1LQ9Y4W2 734 aaKnown RBP4.97□□□□□ -1.61
RAB3C-201ENST00000282878 DENND4BO75064 1496 aaPredicted RBP4.96□□□□□ -1.61
RAB3C-201ENST00000282878 TRAK1Q9UPV9 953 aa4.96□□□□□ -1.61
RAB3C-201ENST00000282878 FBLN1P23142 703 aa4.96□□□□□ -1.62
RAB3C-201ENST00000282878 DAPK1P53355 1430 aa4.96□□□□□ -1.62
RAB3C-201ENST00000282878 UACAQ9BZF9 1416 aa4.96□□□□□ -1.62
RAB3C-201ENST00000282878 TMC1Q8TDI8 760 aa4.96□□□□□ -1.62
RAB3C-201ENST00000282878 DISP1Q96F81 1524 aa4.96□□□□□ -1.62
RAB3C-201ENST00000282878 WDR70Q9NW82 654 aa4.95□□□□□ -1.62
RAB3C-201ENST00000282878 HFM1A2PYH4 1435 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms