RNA–Protein interactions for RNA: ENST00000263228.3

UBE2R2-201, Transcript of ubiquitin conjugating enzyme E2 R2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2R2, Length 4,075 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2R2-201ENST00000263228 EXOC6Q8TAG9 804 aa22.02■■□□□ 1.12
UBE2R2-201ENST00000263228 FHAD1B1AJZ9 1412 aa22.01■■□□□ 1.11
UBE2R2-201ENST00000263228 KNSTRNQ9Y448 316 aa22.01■■□□□ 1.11
UBE2R2-201ENST00000263228 SLKQ9H2G2 1235 aaPredicted RBP22■■□□□ 1.11
UBE2R2-201ENST00000263228 PPM1GO15355 546 aaPredicted RBP22■■□□□ 1.11
UBE2R2-201ENST00000263228 TPRNQ4KMQ1 711 aa22■■□□□ 1.11
UBE2R2-201ENST00000263228 NUDCQ9Y266 331 aa22■■□□□ 1.11
UBE2R2-201ENST00000263228 WDR97A6NE52 1622 aa21.98■■□□□ 1.11
UBE2R2-201ENST00000263228 DDRGK1Q96HY6 314 aa21.97■■□□□ 1.11
UBE2R2-201ENST00000263228 PLEKHD1A6NEE1 506 aa21.97■■□□□ 1.11
UBE2R2-201ENST00000263228 WASHC2AQ641Q2 1341 aa21.96■■□□□ 1.11
UBE2R2-201ENST00000263228 TOPBP1Q92547 1522 aa21.94■■□□□ 1.1
UBE2R2-201ENST00000263228 GZF1Q9H116 711 aaPredicted RBP21.94■■□□□ 1.1
UBE2R2-201ENST00000263228 MAPKBP1O60336 1514 aa21.93■■□□□ 1.1
UBE2R2-201ENST00000263228 PLPPR3Q6T4P5 718 aa21.93■■□□□ 1.1
UBE2R2-201ENST00000263228 POLA1P09884 1462 aaPredicted RBP21.93■■□□□ 1.1
UBE2R2-201ENST00000263228 ST20-MTHFSA0A0A6YYL1 179 aa21.92■■□□□ 1.1
UBE2R2-201ENST00000263228 CCDC146Q8IYE0 955 aa21.89■■□□□ 1.1
UBE2R2-201ENST00000263228 FANCIQ9NVI1 1328 aa21.89■■□□□ 1.09
UBE2R2-201ENST00000263228 LRRC9Q6ZRR7 1453 aa21.89■■□□□ 1.09
UBE2R2-201ENST00000263228 SKAP1Q86WV1 359 aa21.88■■□□□ 1.09
UBE2R2-201ENST00000263228 PDE4AP27815 886 aa21.87■■□□□ 1.09
UBE2R2-201ENST00000263228 DNMBPQ6XZF7 1577 aa21.86■■□□□ 1.09
UBE2R2-201ENST00000263228 ZNF644Q9H582 1327 aaPredicted RBP21.86■■□□□ 1.09
UBE2R2-201ENST00000263228 PLEKHG5O94827 1062 aa21.85■■□□□ 1.09
UBE2R2-201ENST00000263228 IL27Q8NEV9 243 aa21.85■■□□□ 1.09
UBE2R2-201ENST00000263228 NAP1L5Q96NT1 182 aaPredicted RBP21.84■■□□□ 1.09
UBE2R2-201ENST00000263228 ANO8Q9HCE9 1232 aaPredicted RBP21.84■■□□□ 1.09
UBE2R2-201ENST00000263228 CLUAP1Q96AJ1 413 aa21.83■■□□□ 1.09
UBE2R2-201ENST00000263228 TIAM1Q13009 1591 aa21.83■■□□□ 1.08
UBE2R2-201ENST00000263228 GAPVD1Q14C86 1478 aa21.82■■□□□ 1.08
UBE2R2-201ENST00000263228 NCLP19338 710 aaKnown RBP21.82■■□□□ 1.08
UBE2R2-201ENST00000263228 BECN1Q14457 450 aa21.82■■□□□ 1.08
UBE2R2-201ENST00000263228 SAFB2Q14151 953 aaKnown RBP eCLIP21.81■■□□□ 1.08
UBE2R2-201ENST00000263228 ERICH6BQ5W0A0 696 aa21.81■■□□□ 1.08
UBE2R2-201ENST00000263228 FMN1Q68DA7 1419 aa21.81■■□□□ 1.08
UBE2R2-201ENST00000263228 ZBED9Q6R2W3 1325 aa21.8■■□□□ 1.08
UBE2R2-201ENST00000263228 ERCC6Q03468 1493 aa21.8■■□□□ 1.08
UBE2R2-201ENST00000263228 ANP32BQ92688 251 aaKnown RBP21.79■■□□□ 1.08
UBE2R2-201ENST00000263228 CDCA7LQ96GN5 454 aa21.79■■□□□ 1.08
UBE2R2-201ENST00000263228 KIF7Q2M1P5 1343 aa21.79■■□□□ 1.08
UBE2R2-201ENST00000263228 NUP155O75694 1391 aa21.78■■□□□ 1.08
UBE2R2-201ENST00000263228 ZBTB7CA1YPR0 619 aa21.78■■□□□ 1.08
UBE2R2-201ENST00000263228 TCERG1O14776 1098 aaKnown RBP21.78■■□□□ 1.08
UBE2R2-201ENST00000263228 CRBNQ96SW2 442 aa21.77■■□□□ 1.08
UBE2R2-201ENST00000263228 ABCA10Q8WWZ4 1543 aa21.77■■□□□ 1.08
UBE2R2-201ENST00000263228 AKNAQ7Z591 1439 aa21.76■■□□□ 1.07
UBE2R2-201ENST00000263228 C11orf95C9JLR9 678 aaPredicted RBP21.76■■□□□ 1.07
UBE2R2-201ENST00000263228 FTSJ3Q8IY81 847 aaKnown RBP21.76■■□□□ 1.07
UBE2R2-201ENST00000263228 BCL2L13Q9BXK5 485 aa21.76■■□□□ 1.07
UBE2R2-201ENST00000263228 CCDC18Q5T9S5 1454 aa21.75■■□□□ 1.07
UBE2R2-201ENST00000263228 LAMC3Q9Y6N6 1575 aa21.74■■□□□ 1.07
UBE2R2-201ENST00000263228 U2SURPO15042 1029 aaKnown RBP21.74■■□□□ 1.07
UBE2R2-201ENST00000263228 HNRNPMP52272 730 aaKnown RBP eCLIP21.74■■□□□ 1.07
UBE2R2-201ENST00000263228 NBPF8Q3BBV2 869 aa21.74■■□□□ 1.07
UBE2R2-201ENST00000263228 STAG3Q9UJ98 1225 aa21.72■■□□□ 1.07
UBE2R2-201ENST00000263228 URB2Q14146 1524 aaKnown RBP21.72■■□□□ 1.07
UBE2R2-201ENST00000263228 RRP1P56182 461 aaKnown RBP21.72■■□□□ 1.07
UBE2R2-201ENST00000263228 TRIM44Q96DX7 344 aaPredicted RBP21.72■■□□□ 1.07
UBE2R2-201ENST00000263228 RRP7AQ9Y3A4 280 aaKnown RBP21.72■■□□□ 1.07
UBE2R2-201ENST00000263228 TMF1P82094 1093 aa21.71■■□□□ 1.07
UBE2R2-201ENST00000263228 ARID3AQ99856 593 aa21.71■■□□□ 1.07
UBE2R2-201ENST00000263228 AQRO60306 1485 aaKnown RBP eCLIP21.7■■□□□ 1.06
UBE2R2-201ENST00000263228 ROCK2O75116 1388 aaKnown RBP21.7■■□□□ 1.06
UBE2R2-201ENST00000263228 KTN1Q86UP2 1357 aaKnown RBP21.68■■□□□ 1.06
UBE2R2-201ENST00000263228 PANK3Q9H999 370 aa21.67■■□□□ 1.06
UBE2R2-201ENST00000263228 PRDM2Q13029 1718 aa21.67■■□□□ 1.06
UBE2R2-201ENST00000263228 CCDC7Q96M83 1385 aa21.67■■□□□ 1.06
UBE2R2-201ENST00000263228 NLRP13Q86W25 1043 aa21.66■■□□□ 1.06
UBE2R2-201ENST00000263228 PCF11O94913 1555 aaKnown RBP21.66■■□□□ 1.06
UBE2R2-201ENST00000263228 FOXD4L1Q9NU39 408 aa21.66■■□□□ 1.06
UBE2R2-201ENST00000263228 BRPF3Q9ULD4 1205 aa21.66■■□□□ 1.06
UBE2R2-201ENST00000263228 APBB1O00213 710 aa21.63■■□□□ 1.05
UBE2R2-201ENST00000263228 USP47Q96K76 1375 aa21.63■■□□□ 1.05
UBE2R2-201ENST00000263228 FGD6Q6ZV73 1430 aa21.62■■□□□ 1.05
UBE2R2-201ENST00000263228 GLIPR1L2Q4G1C9 344 aa21.62■■□□□ 1.05
UBE2R2-201ENST00000263228 RALBP1Q15311 655 aa21.61■■□□□ 1.05
UBE2R2-201ENST00000263228 NUTM2DQ5VT03 806 aaPredicted RBP21.6■■□□□ 1.05
UBE2R2-201ENST00000263228 CASKIN1Q8WXD9 1431 aa21.58■■□□□ 1.05
UBE2R2-201ENST00000263228 MFAP1P55081 439 aaKnown RBP21.58■■□□□ 1.05
UBE2R2-201ENST00000263228 COG6Q9Y2V7 657 aa21.58■■□□□ 1.04
UBE2R2-201ENST00000263228 GOLGA2Q08379 1002 aa21.57■■□□□ 1.04
UBE2R2-201ENST00000263228 PTPRKQ15262 1439 aa21.57■■□□□ 1.04
UBE2R2-201ENST00000263228 GSE1Q14687 1217 aa21.57■■□□□ 1.04
UBE2R2-201ENST00000263228 APAF1O14727 1248 aa21.55■■□□□ 1.04
UBE2R2-201ENST00000263228 SOX12O15370 315 aa21.55■■□□□ 1.04
UBE2R2-201ENST00000263228 MYBBP1AQ9BQG0 1328 aaKnown RBP21.55■■□□□ 1.04
UBE2R2-201ENST00000263228 MORC1Q86VD1 984 aa21.54■■□□□ 1.04
UBE2R2-201ENST00000263228 HSP90AB1P08238 724 aaKnown RBP21.53■■□□□ 1.04
UBE2R2-201ENST00000263228 MRC2Q9UBG0 1479 aa21.53■■□□□ 1.04
UBE2R2-201ENST00000263228 EFCAB5A4FU69 1503 aa21.53■■□□□ 1.04
UBE2R2-201ENST00000263228 FYCO1Q9BQS8 1478 aa21.53■■□□□ 1.04
UBE2R2-201ENST00000263228 STK26Q9P289 416 aa21.52■■□□□ 1.04
UBE2R2-201ENST00000263228 MAP3K1Q13233 1512 aa21.52■■□□□ 1.04
UBE2R2-201ENST00000263228 CUL7Q14999 1698 aa21.52■■□□□ 1.04
UBE2R2-201ENST00000263228 U2AF1L5P0DN76 240 aaPredicted RBP21.52■■□□□ 1.04
UBE2R2-201ENST00000263228 U2AF1Q01081 240 aaKnown RBP eCLIP21.52■■□□□ 1.04
UBE2R2-201ENST00000263228 NFKBIBQ15653 356 aa21.52■■□□□ 1.04
UBE2R2-201ENST00000263228 PLCB2Q00722 1185 aa21.51■■□□□ 1.03
UBE2R2-201ENST00000263228 CFAP53Q96M91 514 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms