RNA–Protein interactions for RNA: ENST00000262659.12

CCM2L-201, Transcript of CCM2 like scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCM2L, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2L-201ENST00000262659 VSIG10Q8N0Z9 540 aa31.59■■■□□ 2.65
CCM2L-201ENST00000262659 SKAP1Q86WV1 359 aa31.59■■■□□ 2.65
CCM2L-201ENST00000262659 FRAT2O75474 233 aaPredicted RBP31.57■■■□□ 2.64
CCM2L-201ENST00000262659 L3MBTL2Q969R5 705 aa31.57■■■□□ 2.64
CCM2L-201ENST00000262659 FMN1Q68DA7 1419 aa31.54■■■□□ 2.64
CCM2L-201ENST00000262659 DAXXQ9UER7 740 aaPredicted RBP31.54■■■□□ 2.64
CCM2L-201ENST00000262659 ABCA5Q8WWZ7 1642 aa31.53■■■□□ 2.64
CCM2L-201ENST00000262659 DHX29Q7Z478 1369 aaKnown RBP31.51■■■□□ 2.64
CCM2L-201ENST00000262659 PNISRQ8TF01 805 aaKnown RBP31.51■■■□□ 2.63
CCM2L-201ENST00000262659 HMGXB3Q12766 1538 aa31.51■■■□□ 2.63
CCM2L-201ENST00000262659 RRAGDQ9NQL2 400 aaPredicted RBP31.5■■■□□ 2.63
CCM2L-201ENST00000262659 DENND4BO75064 1496 aaPredicted RBP31.49■■■□□ 2.63
CCM2L-201ENST00000262659 RCAN3Q9UKA8 241 aa31.47■■■□□ 2.63
CCM2L-201ENST00000262659 NBPF8Q3BBV2 869 aa31.46■■■□□ 2.63
CCM2L-201ENST00000262659 IGF1RP08069 1367 aa31.46■■■□□ 2.63
CCM2L-201ENST00000262659 CFTRP13569 1480 aa31.46■■■□□ 2.63
CCM2L-201ENST00000262659 SPATA31E1Q6ZUB1 1445 aa31.44■■■□□ 2.62
CCM2L-201ENST00000262659 POLR1AO95602 1720 aaPredicted RBP31.43■■■□□ 2.62
CCM2L-201ENST00000262659 TMC1Q8TDI8 760 aa31.39■■■□□ 2.62
CCM2L-201ENST00000262659 FYCO1Q9BQS8 1478 aa31.39■■■□□ 2.62
CCM2L-201ENST00000262659 FHOD3Q2V2M9 1422 aa31.38■■■□□ 2.61
CCM2L-201ENST00000262659 RRP7BPQ9NSQ0 103 aa31.37■■■□□ 2.61
CCM2L-201ENST00000262659 POLR3GLQ9BT43 218 aa31.35■■■□□ 2.61
CCM2L-201ENST00000262659 CARMIL1Q5VZK9 1371 aa31.35■■■□□ 2.61
CCM2L-201ENST00000262659 FOXD1Q16676 465 aa31.34■■■□□ 2.61
CCM2L-201ENST00000262659 CASKIN1Q8WXD9 1431 aa31.32■■■□□ 2.6
CCM2L-201ENST00000262659 HECW1Q76N89 1606 aa31.31■■■□□ 2.6
CCM2L-201ENST00000262659 HSP90AA2PQ14568 343 aaPredicted RBP31.31■■■□□ 2.6
CCM2L-201ENST00000262659 POGKQ9P215 609 aa31.3■■■□□ 2.6
CCM2L-201ENST00000262659 PLIN1O60240 522 aa31.29■■■□□ 2.6
CCM2L-201ENST00000262659 MPHOSPH9Q99550 1183 aa31.28■■■□□ 2.6
CCM2L-201ENST00000262659 LRPPRCP42704 1394 aaKnown RBP31.28■■■□□ 2.6
CCM2L-201ENST00000262659 NAP1L5Q96NT1 182 aaPredicted RBP31.28■■■□□ 2.6
CCM2L-201ENST00000262659 CHIC2Q9UKJ5 165 aa31.27■■■□□ 2.6
CCM2L-201ENST00000262659 MTUS2Q5JR59 1369 aa31.25■■■□□ 2.59
CCM2L-201ENST00000262659 CRBNQ96SW2 442 aa31.24■■■□□ 2.59
CCM2L-201ENST00000262659 FGD5Q6ZNL6 1462 aa31.23■■■□□ 2.59
CCM2L-201ENST00000262659 RRP9O43818 475 aaKnown RBP31.23■■■□□ 2.59
CCM2L-201ENST00000262659 C8orf34Q49A92 452 aa31.21■■■□□ 2.59
CCM2L-201ENST00000262659 MYOM3Q5VTT5 1437 aa31.2■■■□□ 2.59
CCM2L-201ENST00000262659 KDM6BO15054 1643 aa31.2■■■□□ 2.58
CCM2L-201ENST00000262659 HSP90AA1P07900 732 aaKnown RBP31.2■■■□□ 2.58
CCM2L-201ENST00000262659 FAM161AQ3B820 660 aa31.19■■■□□ 2.58
CCM2L-201ENST00000262659 TEX14Q8IWB6 1497 aa31.18■■■□□ 2.58
CCM2L-201ENST00000262659 CDCA7LQ96GN5 454 aa31.16■■■□□ 2.58
CCM2L-201ENST00000262659 PNNQ9H307 717 aaKnown RBP31.16■■■□□ 2.58
CCM2L-201ENST00000262659 PODXL2Q9NZ53 605 aa31.16■■■□□ 2.58
CCM2L-201ENST00000262659 BCORL1Q5H9F3 1711 aa31.15■■■□□ 2.58
CCM2L-201ENST00000262659 MIA2Q96PC5 1412 aa31.15■■■□□ 2.58
CCM2L-201ENST00000262659 PLEKHG5O94827 1062 aa31.14■■■□□ 2.58
CCM2L-201ENST00000262659 L1TD1Q5T7N2 865 aaKnown RBP31.14■■■□□ 2.58
CCM2L-201ENST00000262659 RPRD2Q5VT52 1461 aaKnown RBP31.14■■■□□ 2.58
CCM2L-201ENST00000262659 PRDM2Q13029 1718 aa31.13■■■□□ 2.57
CCM2L-201ENST00000262659 KDM2BQ8NHM5 1336 aa31.13■■■□□ 2.57
CCM2L-201ENST00000262659 GCC2Q8IWJ2 1684 aa31.12■■■□□ 2.57
CCM2L-201ENST00000262659 PDE3BQ13370 1112 aa31.11■■■□□ 2.57
CCM2L-201ENST00000262659 KTN1Q86UP2 1357 aaKnown RBP31.09■■■□□ 2.57
CCM2L-201ENST00000262659 ANKRD30BQ9BXX2 1392 aa31.09■■■□□ 2.57
CCM2L-201ENST00000262659 BRD4O60885 1362 aaPredicted RBP31.09■■■□□ 2.57
CCM2L-201ENST00000262659 CLCN1P35523 988 aa31.07■■■□□ 2.57
CCM2L-201ENST00000262659 ARXQ96QS3 562 aa31.05■■■□□ 2.56
CCM2L-201ENST00000262659 C20orf194Q5TEA3 1177 aa31.05■■■□□ 2.56
CCM2L-201ENST00000262659 MYBBP1AQ9BQG0 1328 aaKnown RBP31.05■■■□□ 2.56
CCM2L-201ENST00000262659 USP47Q96K76 1375 aa31.05■■■□□ 2.56
CCM2L-201ENST00000262659 EFCAB5A4FU69 1503 aa31.03■■■□□ 2.56
CCM2L-201ENST00000262659 CENPQQ7L2Z9 268 aaPredicted RBP31.02■■■□□ 2.56
CCM2L-201ENST00000262659 SNAPC4Q5SXM2 1469 aa31.02■■■□□ 2.56
CCM2L-201ENST00000262659 KIF15Q9NS87 1388 aa31.02■■■□□ 2.56
CCM2L-201ENST00000262659 CADPSQ9ULU8 1353 aa31.01■■■□□ 2.55
CCM2L-201ENST00000262659 XRCC6P12956 609 aaKnown RBP eCLIP31■■■□□ 2.55
CCM2L-201ENST00000262659 ARID4BQ4LE39 1312 aaPredicted RBP30.98■■■□□ 2.55
CCM2L-201ENST00000262659 RGS3P49796 1198 aa30.96■■■□□ 2.55
CCM2L-201ENST00000262659 SUPT6HQ7KZ85 1726 aaKnown RBP30.94■■■□□ 2.54
CCM2L-201ENST00000262659 PANK2Q9BZ23 570 aa30.94■■■□□ 2.54
CCM2L-201ENST00000262659 RALBP1Q15311 655 aa30.94■■■□□ 2.54
CCM2L-201ENST00000262659 ROCK2O75116 1388 aaKnown RBP30.94■■■□□ 2.54
CCM2L-201ENST00000262659 ZNF326Q5BKZ1 582 aaKnown RBP30.93■■■□□ 2.54
CCM2L-201ENST00000262659 SLKQ9H2G2 1235 aaPredicted RBP30.93■■■□□ 2.54
CCM2L-201ENST00000262659 LRRIQ1Q96JM4 1722 aa30.93■■■□□ 2.54
CCM2L-201ENST00000262659 GOLGA6L3A6NEY3 463 aa30.89■■■□□ 2.54
CCM2L-201ENST00000262659 USP19O94966 1318 aa30.87■■■□□ 2.53
CCM2L-201ENST00000262659 UGGT2Q9NYU1 1516 aa30.87■■■□□ 2.53
CCM2L-201ENST00000262659 FSD2A1L4K1 749 aa30.86■■■□□ 2.53
CCM2L-201ENST00000262659 TCOF1Q13428 1488 aaKnown RBP30.86■■■□□ 2.53
CCM2L-201ENST00000262659 KDM5CP41229 1560 aa30.85■■■□□ 2.53
CCM2L-201ENST00000262659 SLC4A1APQ9BWU0 796 aaKnown RBP30.83■■■□□ 2.53
CCM2L-201ENST00000262659 NLRP13Q86W25 1043 aa30.83■■■□□ 2.53
CCM2L-201ENST00000262659 EHBP1L1Q8N3D4 1523 aa30.82■■■□□ 2.52
CCM2L-201ENST00000262659 RAD54L2Q9Y4B4 1467 aa30.8■■■□□ 2.52
CCM2L-201ENST00000262659 MBD5Q9P267 1494 aa30.8■■■□□ 2.52
CCM2L-201ENST00000262659 ANTXR1Q9H6X2 564 aa30.8■■■□□ 2.52
CCM2L-201ENST00000262659 ARHGEF11O15085 1522 aa30.79■■■□□ 2.52
CCM2L-201ENST00000262659 BECN1Q14457 450 aa30.79■■■□□ 2.52
CCM2L-201ENST00000262659 GZF1Q9H116 711 aaPredicted RBP30.79■■■□□ 2.52
CCM2L-201ENST00000262659 THOC2Q8NI27 1593 aaKnown RBP30.76■■■□□ 2.52
CCM2L-201ENST00000262659 SEC24BO95487 1268 aa30.75■■■□□ 2.51
CCM2L-201ENST00000262659 GRIN2BQ13224 1484 aa30.74■■■□□ 2.51
CCM2L-201ENST00000262659 MAGI3Q5TCQ9 1506 aa30.73■■■□□ 2.51
CCM2L-201ENST00000262659 FANCD2Q9BXW9 1451 aa30.73■■■□□ 2.51
CCM2L-201ENST00000262659 ERBB4Q15303 1308 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms