RNA–Protein interactions for RNA: ENST00000257566.7

TBX3-201, Transcript of T-box 3, humanhuman

TSL 1 (best) BASIC

Gene TBX3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBX3-201ENST00000257566 GZF1Q9H116 711 aaPredicted RBP16.4■□□□□ 0.22
TBX3-201ENST00000257566 RBM10P98175 930 aaKnown RBP16.39■□□□□ 0.21
TBX3-201ENST00000257566 PHLDB1Q86UU1 1377 aa16.38■□□□□ 0.21
TBX3-201ENST00000257566 MSNP26038 577 aaKnown RBP16.37■□□□□ 0.21
TBX3-201ENST00000257566 RRP9O43818 475 aaKnown RBP16.36■□□□□ 0.21
TBX3-201ENST00000257566 FAM13BQ9NYF5 915 aa16.34■□□□□ 0.21
TBX3-201ENST00000257566 FAM43AQ8N2R8 423 aa16.33■□□□□ 0.2
TBX3-201ENST00000257566 FMN1Q68DA7 1419 aa16.32■□□□□ 0.2
TBX3-201ENST00000257566 FOXD1Q16676 465 aa16.31■□□□□ 0.2
TBX3-201ENST00000257566 FRAT1Q92837 279 aaPredicted RBP16.31■□□□□ 0.2
TBX3-201ENST00000257566 POLA1P09884 1462 aaPredicted RBP16.31■□□□□ 0.2
TBX3-201ENST00000257566 TNNT3P45378 269 aaPredicted RBP16.31■□□□□ 0.2
TBX3-201ENST00000257566 SLC4A3P48751 1232 aa16.31■□□□□ 0.2
TBX3-201ENST00000257566 BIVM-ERCC5R4GMW8 1640 aa16.31■□□□□ 0.2
TBX3-201ENST00000257566 PTMAP06454 111 aaKnown RBP16.3■□□□□ 0.2
TBX3-201ENST00000257566 ZBTB7CA1YPR0 619 aa16.3■□□□□ 0.2
TBX3-201ENST00000257566 GOLGA6L3A6NEY3 463 aa16.29■□□□□ 0.2
TBX3-201ENST00000257566 TOPBP1Q92547 1522 aa16.29■□□□□ 0.2
TBX3-201ENST00000257566 LRRC9Q6ZRR7 1453 aa16.28■□□□□ 0.2
TBX3-201ENST00000257566 GAPVD1Q14C86 1478 aa16.27■□□□□ 0.2
TBX3-201ENST00000257566 MYH16Q9H6N6 1097 aa16.27■□□□□ 0.2
TBX3-201ENST00000257566 ERCC6Q03468 1493 aa16.27■□□□□ 0.2
TBX3-201ENST00000257566 BBXQ8WY36 941 aaPredicted RBP16.27■□□□□ 0.2
TBX3-201ENST00000257566 RRBP1Q9P2E9 1410 aaKnown RBP16.27■□□□□ 0.2
TBX3-201ENST00000257566 BCL11BQ9C0K0 894 aaPredicted RBP16.26■□□□□ 0.19
TBX3-201ENST00000257566 SENP3Q9H4L4 574 aaPredicted RBP16.26■□□□□ 0.19
TBX3-201ENST00000257566 SLKQ9H2G2 1235 aaPredicted RBP16.25■□□□□ 0.19
TBX3-201ENST00000257566 CFDP1Q9UEE9 299 aaPredicted RBP16.25■□□□□ 0.19
TBX3-201ENST00000257566 AQRO60306 1485 aaKnown RBP eCLIP16.25■□□□□ 0.192e-7■■■□□ 18.6
TBX3-201ENST00000257566 RGS3P49796 1198 aa16.23■□□□□ 0.19
TBX3-201ENST00000257566 NFKBIBQ15653 356 aa16.22■□□□□ 0.19
TBX3-201ENST00000257566 MAPK8IP2Q13387 824 aaPredicted RBP16.22■□□□□ 0.19
TBX3-201ENST00000257566 PPP1R15AO75807 674 aaPredicted RBP16.21■□□□□ 0.19
TBX3-201ENST00000257566 APPP05067 770 aa16.21■□□□□ 0.19
TBX3-201ENST00000257566 CCER2I3L3R5 266 aa16.21■□□□□ 0.19
TBX3-201ENST00000257566 TMC1Q8TDI8 760 aa16.2■□□□□ 0.18
TBX3-201ENST00000257566 KDM2AQ9Y2K7 1162 aa16.2■□□□□ 0.18
TBX3-201ENST00000257566 SPRYD3Q8NCJ5 442 aa16.19■□□□□ 0.18
TBX3-201ENST00000257566 PLEKHD1A6NEE1 506 aa16.18■□□□□ 0.18
TBX3-201ENST00000257566 TCERG1O14776 1098 aaKnown RBP16.18■□□□□ 0.18
TBX3-201ENST00000257566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.182e-7■□□□□ 9
TBX3-201ENST00000257566 EIF4G2P78344 907 aaKnown RBP eCLIP16.18■□□□□ 0.18
TBX3-201ENST00000257566 GOLGA6L22H0YM25 854 aa16.16■□□□□ 0.18
TBX3-201ENST00000257566 TSPY4P0CV99 314 aa16.16■□□□□ 0.18
TBX3-201ENST00000257566 TSPY10P0CW01 314 aa16.16■□□□□ 0.18
TBX3-201ENST00000257566 TIAM1Q13009 1591 aa16.16■□□□□ 0.18
TBX3-201ENST00000257566 DNMBPQ6XZF7 1577 aa16.15■□□□□ 0.18
TBX3-201ENST00000257566 CASKIN1Q8WXD9 1431 aa16.14■□□□□ 0.17
TBX3-201ENST00000257566 PAXIP1Q6ZW49 1069 aaPredicted RBP16.14■□□□□ 0.17
TBX3-201ENST00000257566 FGD6Q6ZV73 1430 aa16.14■□□□□ 0.17
TBX3-201ENST00000257566 ABCA10Q8WWZ4 1543 aa16.13■□□□□ 0.17
TBX3-201ENST00000257566 PDE4AP27815 886 aa16.13■□□□□ 0.17
TBX3-201ENST00000257566 MPHOSPH9Q99550 1183 aa16.12■□□□□ 0.17
TBX3-201ENST00000257566 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.12■□□□□ 0.17
TBX3-201ENST00000257566 ZNF644Q9H582 1327 aaPredicted RBP16.11■□□□□ 0.17
TBX3-201ENST00000257566 ZHX1Q9UKY1 873 aaPredicted RBP16.11■□□□□ 0.17
TBX3-201ENST00000257566 URB2Q14146 1524 aaKnown RBP16.1■□□□□ 0.17
TBX3-201ENST00000257566 ZNF771Q7L3S4 317 aaPredicted RBP16.1■□□□□ 0.17
TBX3-201ENST00000257566 TAF7LQ5H9L4 462 aa16.09■□□□□ 0.17
TBX3-201ENST00000257566 HSPA5P11021 654 aaKnown RBP16.09■□□□□ 0.17
TBX3-201ENST00000257566 CCDC18Q5T9S5 1454 aa16.08■□□□□ 0.17
TBX3-201ENST00000257566 PCF11O94913 1555 aaKnown RBP16.08■□□□□ 0.17
TBX3-201ENST00000257566 FGD1P98174 961 aa16.08■□□□□ 0.16
TBX3-201ENST00000257566 PTMSP20962 102 aa16.08■□□□□ 0.16
TBX3-201ENST00000257566 FYCO1Q9BQS8 1478 aa16.07■□□□□ 0.16
TBX3-201ENST00000257566 L3MBTL2Q969R5 705 aa16.07■□□□□ 0.16
TBX3-201ENST00000257566 PLCD3Q8N3E9 789 aa16.07■□□□□ 0.16
TBX3-201ENST00000257566 JPH4Q96JJ6 628 aa16.07■□□□□ 0.16
TBX3-201ENST00000257566 MAP7D2Q96T17 732 aa16.07■□□□□ 0.16
TBX3-201ENST00000257566 RGL3Q3MIN7 710 aa16.06■□□□□ 0.16
TBX3-201ENST00000257566 NCOA2Q15596 1464 aa16.06■□□□□ 0.16
TBX3-201ENST00000257566 TPM2P07951 284 aa16.06■□□□□ 0.16
TBX3-201ENST00000257566 MYOM3Q5VTT5 1437 aa16.04■□□□□ 0.16
TBX3-201ENST00000257566 FRAT2O75474 233 aaPredicted RBP16.04■□□□□ 0.16
TBX3-201ENST00000257566 CHMP4BQ9H444 224 aaKnown RBP16.04■□□□□ 0.16
TBX3-201ENST00000257566 PRDM10Q9NQV6 1147 aa16.04■□□□□ 0.16
TBX3-201ENST00000257566 PLCB2Q00722 1185 aa16.04■□□□□ 0.16
TBX3-201ENST00000257566 NAP1L2Q9ULW6 460 aaPredicted RBP16.03■□□□□ 0.16
TBX3-201ENST00000257566 CHAF1AQ13111 956 aaPredicted RBP16.03■□□□□ 0.16
TBX3-201ENST00000257566 PDCL3Q9H2J4 239 aa16.02■□□□□ 0.15
TBX3-201ENST00000257566 PKD2Q13563 968 aa16.01■□□□□ 0.15
TBX3-201ENST00000257566 R3HCC1Q9Y3T6 440 aaKnown RBP16.01■□□□□ 0.15
TBX3-201ENST00000257566 EFCAB5A4FU69 1503 aa16■□□□□ 0.15
TBX3-201ENST00000257566 AAMPQ13685 434 aa15.98■□□□□ 0.15
TBX3-201ENST00000257566 AEBP1Q8IUX7 1158 aa15.98■□□□□ 0.15
TBX3-201ENST00000257566 LAMC3Q9Y6N6 1575 aa15.97■□□□□ 0.15
TBX3-201ENST00000257566 HNRNPMP52272 730 aaKnown RBP eCLIP15.97■□□□□ 0.15
TBX3-201ENST00000257566 HAP1P54257 671 aaPredicted RBP15.97■□□□□ 0.15
TBX3-201ENST00000257566 KIAA1211Q6ZU35 1233 aa15.96■□□□□ 0.15
TBX3-201ENST00000257566 GRIN2BQ13224 1484 aa15.96■□□□□ 0.14
TBX3-201ENST00000257566 TPRNQ4KMQ1 711 aa15.95■□□□□ 0.14
TBX3-201ENST00000257566 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.95■□□□□ 0.14
TBX3-201ENST00000257566 C11orf95C9JLR9 678 aaPredicted RBP15.95■□□□□ 0.14
TBX3-201ENST00000257566 WDR97A6NE52 1622 aa15.95■□□□□ 0.14
TBX3-201ENST00000257566 CARMIL2Q6F5E8 1435 aa15.95■□□□□ 0.14
TBX3-201ENST00000257566 UACAQ9BZF9 1416 aa15.95■□□□□ 0.14
TBX3-201ENST00000257566 CARD11Q9BXL7 1154 aa15.94■□□□□ 0.14
TBX3-201ENST00000257566 MTERF4Q7Z6M4 381 aaKnown RBP15.93■□□□□ 0.14
TBX3-201ENST00000257566 CDK13Q14004 1512 aaKnown RBP15.93■□□□□ 0.14
TBX3-201ENST00000257566 DCAF11Q8TEB1 546 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms