RNA–Protein interactions for RNA: ENST00000257566.7

TBX3-201, Transcript of T-box 3, humanhuman

TSL 1 (best) BASIC

Gene TBX3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBX3-201ENST00000257566 NISCHQ9Y2I1 1504 aa22.89■■□□□ 1.25
TBX3-201ENST00000257566 PELP1Q8IZL8 1130 aaKnown RBP21.47■■□□□ 1.03
TBX3-201ENST00000257566 MYT1Q01538 1121 aa21.18■□□□□ 0.98
TBX3-201ENST00000257566 DCAF8L2P0C7V8 631 aa20.82■□□□□ 0.92
TBX3-201ENST00000257566 SHROOM4Q9ULL8 1493 aa20.62■□□□□ 0.89
TBX3-201ENST00000257566 SUPT5HO00267 1087 aaKnown RBP20.39■□□□□ 0.85
TBX3-201ENST00000257566 PCGF6Q9BYE7 350 aa20.09■□□□□ 0.81
TBX3-201ENST00000257566 HRCP23327 699 aa19.97■□□□□ 0.79
TBX3-201ENST00000257566 CENPBP07199 599 aaPredicted RBP19.81■□□□□ 0.76
TBX3-201ENST00000257566 PPARGC1BQ86YN6 1023 aaKnown RBP19.75■□□□□ 0.75
TBX3-201ENST00000257566 EHMT2Q96KQ7 1210 aa19.66■□□□□ 0.74
TBX3-201ENST00000257566 TTBK1Q5TCY1 1321 aaPredicted RBP19.63■□□□□ 0.73
TBX3-201ENST00000257566 ERICH6Q7L0X2 663 aa19.41■□□□□ 0.7
TBX3-201ENST00000257566 ZEB1P37275 1124 aaPredicted RBP19.34■□□□□ 0.69
TBX3-201ENST00000257566 YTHDC1Q96MU7 727 aaKnown RBP19.3■□□□□ 0.68
TBX3-201ENST00000257566 GTF3C3Q9Y5Q9 886 aa19.24■□□□□ 0.67
TBX3-201ENST00000257566 SCAF1Q9H7N4 1312 aaKnown RBP19.18■□□□□ 0.66
TBX3-201ENST00000257566 ZCCHC6Q5VYS8 1495 aaKnown RBP19.18■□□□□ 0.66
TBX3-201ENST00000257566 CHIC1Q5VXU3 224 aa19.09■□□□□ 0.65
TBX3-201ENST00000257566 FAM9AQ8IZU1 332 aaPredicted RBP19.09■□□□□ 0.65
TBX3-201ENST00000257566 CCDC180Q9P1Z9 1646 aa19.02■□□□□ 0.63
TBX3-201ENST00000257566 BCL11AQ9H165 835 aa19■□□□□ 0.63
TBX3-201ENST00000257566 ACIN1Q9UKV3 1341 aaKnown RBP18.95■□□□□ 0.62
TBX3-201ENST00000257566 CCER1Q8TC90 406 aaPredicted RBP18.95■□□□□ 0.62
TBX3-201ENST00000257566 ABCC9O60706 1549 aa18.86■□□□□ 0.61
TBX3-201ENST00000257566 LOC105371045A0A1W2PR82 267 aa18.86■□□□□ 0.61
TBX3-201ENST00000257566 TRIM41Q8WV44 630 aa18.82■□□□□ 0.6
TBX3-201ENST00000257566 TRIM26Q12899 539 aaPredicted RBP18.76■□□□□ 0.59
TBX3-201ENST00000257566 NEUROD1Q13562 356 aa18.7■□□□□ 0.58
TBX3-201ENST00000257566 DIEXFQ68CQ4 756 aaKnown RBP18.64■□□□□ 0.58
TBX3-201ENST00000257566 NEFLP07196 543 aa18.63■□□□□ 0.57
TBX3-201ENST00000257566 SCRIBQ14160 1630 aa18.56■□□□□ 0.56
TBX3-201ENST00000257566 PRKCSHP14314 528 aaPredicted RBP18.54■□□□□ 0.56
TBX3-201ENST00000257566 MYO15BQ96JP2 1530 aa18.51■□□□□ 0.55
TBX3-201ENST00000257566 EIF5BO60841 1220 aaKnown RBP18.49■□□□□ 0.55
TBX3-201ENST00000257566 RANGAP1P46060 587 aaPredicted RBP18.49■□□□□ 0.55
TBX3-201ENST00000257566 ANP32EQ9BTT0 268 aa18.49■□□□□ 0.55
TBX3-201ENST00000257566 PABPN1Q86U42 306 aaKnown RBP eCLIP18.4■□□□□ 0.54
TBX3-201ENST00000257566 BCANQ96GW7 911 aa18.37■□□□□ 0.53
TBX3-201ENST00000257566 RTL5Q5HYW3 569 aaPredicted RBP18.37■□□□□ 0.53
TBX3-201ENST00000257566 DCAF1Q9Y4B6 1507 aa18.33■□□□□ 0.53
TBX3-201ENST00000257566 RSF1Q96T23 1441 aaPredicted RBP18.26■□□□□ 0.51
TBX3-201ENST00000257566 APLP2Q06481 763 aa18.23■□□□□ 0.51
TBX3-201ENST00000257566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.22■□□□□ 0.51
TBX3-201ENST00000257566 UBTFP17480 764 aaKnown RBP18.19■□□□□ 0.5
TBX3-201ENST00000257566 CSRNP3Q8WYN3 585 aa18.16■□□□□ 0.5
TBX3-201ENST00000257566 CECR2Q9BXF3 1484 aa18.1■□□□□ 0.49
TBX3-201ENST00000257566 GLIPR1L2Q4G1C9 344 aa18.06■□□□□ 0.48
TBX3-201ENST00000257566 NACADO15069 1562 aa17.99■□□□□ 0.47
TBX3-201ENST00000257566 MYT1LQ9UL68 1186 aa17.98■□□□□ 0.47
TBX3-201ENST00000257566 RTN4Q9NQC3 1192 aaKnown RBP17.93■□□□□ 0.46
TBX3-201ENST00000257566 RB1CC1Q8TDY2 1594 aa17.92■□□□□ 0.46
TBX3-201ENST00000257566 NBR1Q14596 966 aa17.92■□□□□ 0.46
TBX3-201ENST00000257566 CDK11AQ9UQ88 783 aaPredicted RBP17.91■□□□□ 0.46
TBX3-201ENST00000257566 MROH2BQ7Z745 1585 aa17.88■□□□□ 0.45
TBX3-201ENST00000257566 ZNF316A6NFI3 1004 aaPredicted RBP17.87■□□□□ 0.45
TBX3-201ENST00000257566 DAXXQ9UER7 740 aaPredicted RBP17.87■□□□□ 0.45
TBX3-201ENST00000257566 CCDC136Q96JN2 1154 aa17.85■□□□□ 0.45
TBX3-201ENST00000257566 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.81■□□□□ 0.44
TBX3-201ENST00000257566 FKBP8Q14318 412 aa17.8■□□□□ 0.44
TBX3-201ENST00000257566 CLSPNQ9HAW4 1339 aa17.78■□□□□ 0.44
TBX3-201ENST00000257566 ATP1B4Q9UN42 357 aaPredicted RBP17.73■□□□□ 0.43
TBX3-201ENST00000257566 ANO8Q9HCE9 1232 aaPredicted RBP17.72■□□□□ 0.43
TBX3-201ENST00000257566 DEKP35659 375 aaKnown RBP17.71■□□□□ 0.43
TBX3-201ENST00000257566 SLC24A1O60721 1099 aa17.71■□□□□ 0.42
TBX3-201ENST00000257566 HNRNPUL2Q1KMD3 747 aaKnown RBP17.7■□□□□ 0.42
TBX3-201ENST00000257566 WIZO95785 1651 aa17.7■□□□□ 0.42
TBX3-201ENST00000257566 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
TBX3-201ENST00000257566 MIER1Q8N108 512 aa17.65■□□□□ 0.42
TBX3-201ENST00000257566 ITGAEP38570 1179 aa17.64■□□□□ 0.42
TBX3-201ENST00000257566 TSHZ2Q9NRE2 1034 aa17.61■□□□□ 0.41
TBX3-201ENST00000257566 SUPT16HQ9Y5B9 1047 aaKnown RBP17.59■□□□□ 0.41
TBX3-201ENST00000257566 ANP32AP39687 249 aaKnown RBP17.58■□□□□ 0.4
TBX3-201ENST00000257566 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
TBX3-201ENST00000257566 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
TBX3-201ENST00000257566 RBM19Q9Y4C8 960 aaKnown RBP17.49■□□□□ 0.39
TBX3-201ENST00000257566 SOGA1O94964 1423 aa17.49■□□□□ 0.39
TBX3-201ENST00000257566 NPM2Q86SE8 214 aaKnown RBP17.46■□□□□ 0.39
TBX3-201ENST00000257566 PODXL2Q9NZ53 605 aa17.45■□□□□ 0.38
TBX3-201ENST00000257566 PKNOX2Q96KN3 472 aa17.44■□□□□ 0.38
TBX3-201ENST00000257566 ZBTB47Q9UFB7 747 aaPredicted RBP17.43■□□□□ 0.38
TBX3-201ENST00000257566 WRNQ14191 1432 aaPredicted RBP eCLIP17.41■□□□□ 0.38
TBX3-201ENST00000257566 CEP162Q5TB80 1403 aa17.4■□□□□ 0.38
TBX3-201ENST00000257566 SALL2Q9Y467 1007 aaPredicted RBP17.4■□□□□ 0.38
TBX3-201ENST00000257566 BAZ1BQ9UIG0 1483 aaKnown RBP17.38■□□□□ 0.37
TBX3-201ENST00000257566 ERICH6BQ5W0A0 696 aa17.36■□□□□ 0.37
TBX3-201ENST00000257566 TOP2AP11388 1531 aaKnown RBP17.36■□□□□ 0.37
TBX3-201ENST00000257566 SMARCA4P51532 1647 aa17.36■□□□□ 0.37
TBX3-201ENST00000257566 VSIG10Q8N0Z9 540 aa17.33■□□□□ 0.37
TBX3-201ENST00000257566 NEFMP07197 916 aa17.31■□□□□ 0.36
TBX3-201ENST00000257566 RUSC2Q8N2Y8 1516 aa17.29■□□□□ 0.36
TBX3-201ENST00000257566 P3H3Q8IVL6 736 aa17.28■□□□□ 0.36
TBX3-201ENST00000257566 TNIKQ9UKE5 1360 aa17.27■□□□□ 0.35
TBX3-201ENST00000257566 A0A0U1RQG5 324 aaPredicted RBP17.26■□□□□ 0.35
TBX3-201ENST00000257566 IRX6P78412 446 aaPredicted RBP17.26■□□□□ 0.35
TBX3-201ENST00000257566 CNGB1Q14028 1251 aaPredicted RBP17.25■□□□□ 0.35
TBX3-201ENST00000257566 CLIP1P30622 1438 aa17.24■□□□□ 0.35
TBX3-201ENST00000257566 GOLGA3Q08378 1498 aa17.24■□□□□ 0.35
TBX3-201ENST00000257566 TRIM52Q96A61 297 aa17.23■□□□□ 0.35
TBX3-201ENST00000257566 EEA1Q15075 1411 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms