RNA–Protein interactions for RNA: ENST00000226328.8

RUFY3-201, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 4,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-201ENST00000226328 CHGAP10645 457 aaKnown RBP7.79□□□□□ -1.16
RUFY3-201ENST00000226328 HDGFP51858 240 aaKnown RBP7.79□□□□□ -1.16
RUFY3-201ENST00000226328 DENND4BO75064 1496 aaPredicted RBP7.78□□□□□ -1.16
RUFY3-201ENST00000226328 PLEKHH2Q8IVE3 1493 aa7.78□□□□□ -1.16
RUFY3-201ENST00000226328 CHIC2Q9UKJ5 165 aa7.78□□□□□ -1.16
RUFY3-201ENST00000226328 ARHGAP5Q13017 1502 aa7.78□□□□□ -1.16
RUFY3-201ENST00000226328 ATP10BO94823 1461 aa7.78□□□□□ -1.16
RUFY3-201ENST00000226328 EPRSP07814 1512 aaKnown RBP7.78□□□□□ -1.16
RUFY3-201ENST00000226328 HNRNPMP52272 730 aaKnown RBP eCLIP7.77□□□□□ -1.16
RUFY3-201ENST00000226328 AKNAQ7Z591 1439 aa7.77□□□□□ -1.17
RUFY3-201ENST00000226328 SCAPERQ9BY12 1400 aa7.77□□□□□ -1.17
RUFY3-201ENST00000226328 PPP1R15AO75807 674 aaPredicted RBP7.77□□□□□ -1.17
RUFY3-201ENST00000226328 CFAP43Q8NDM7 1665 aa7.76□□□□□ -1.17
RUFY3-201ENST00000226328 FYCO1Q9BQS8 1478 aa7.76□□□□□ -1.17
RUFY3-201ENST00000226328 PCF11O94913 1555 aaKnown RBP7.76□□□□□ -1.17
RUFY3-201ENST00000226328 ABCA9Q8IUA7 1624 aa7.76□□□□□ -1.17
RUFY3-201ENST00000226328 KIF3BO15066 747 aa7.76□□□□□ -1.17
RUFY3-201ENST00000226328 WASHC2CQ9Y4E1 1318 aa7.75□□□□□ -1.17
RUFY3-201ENST00000226328 FANCAO15360 1455 aa7.74□□□□□ -1.17
RUFY3-201ENST00000226328 ADGRL1O94910 1474 aa7.74□□□□□ -1.17
RUFY3-201ENST00000226328 AFAP1Q8N556 730 aa7.73□□□□□ -1.17
RUFY3-201ENST00000226328 ANKRD30AQ9BXX3 1397 aa7.73□□□□□ -1.17
RUFY3-201ENST00000226328 MAGI3Q5TCQ9 1506 aa7.72□□□□□ -1.17
RUFY3-201ENST00000226328 DMRT2Q9Y5R5 561 aa7.72□□□□□ -1.17
RUFY3-201ENST00000226328 KIF14Q15058 1648 aa7.71□□□□□ -1.17
RUFY3-201ENST00000226328 NEO1Q92859 1461 aa7.71□□□□□ -1.17
RUFY3-201ENST00000226328 RRP7BPQ9NSQ0 103 aa7.71□□□□□ -1.17
RUFY3-201ENST00000226328 EID1Q9Y6B2 187 aa7.71□□□□□ -1.17
RUFY3-201ENST00000226328 CDK13Q14004 1512 aaKnown RBP7.71□□□□□ -1.18
RUFY3-201ENST00000226328 KDM6BO15054 1643 aa7.7□□□□□ -1.18
RUFY3-201ENST00000226328 PLCH2O75038 1416 aa7.7□□□□□ -1.18
RUFY3-201ENST00000226328 C14orf37Q86TY3 774 aa7.7□□□□□ -1.18
RUFY3-201ENST00000226328 TTC37Q6PGP7 1564 aa7.7□□□□□ -1.18
RUFY3-201ENST00000226328 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.7□□□□□ -1.18
RUFY3-201ENST00000226328 ZNF326Q5BKZ1 582 aaKnown RBP7.69□□□□□ -1.18
RUFY3-201ENST00000226328 PPP6R1Q9UPN7 881 aa7.69□□□□□ -1.18
RUFY3-201ENST00000226328 ARAP3Q8WWN8 1544 aa7.69□□□□□ -1.18
RUFY3-201ENST00000226328 MYOM3Q5VTT5 1437 aa7.68□□□□□ -1.18
RUFY3-201ENST00000226328 EHBP1L1Q8N3D4 1523 aa7.68□□□□□ -1.18
RUFY3-201ENST00000226328 MAP3K1Q13233 1512 aa7.67□□□□□ -1.18
RUFY3-201ENST00000226328 CFAP74Q9C0B2 1584 aa7.67□□□□□ -1.18
RUFY3-201ENST00000226328 TSPOAP1O95153 1857 aa7.66□□□□□ -1.18
RUFY3-201ENST00000226328 ZNF518AQ6AHZ1 1483 aa7.66□□□□□ -1.18
RUFY3-201ENST00000226328 FRMPD1Q5SYB0 1578 aa7.66□□□□□ -1.18
RUFY3-201ENST00000226328 SCAF1Q9H7N4 1312 aaKnown RBP7.66□□□□□ -1.18
RUFY3-201ENST00000226328 KANK4Q5T7N3 995 aaPredicted RBP7.65□□□□□ -1.18
RUFY3-201ENST00000226328 MYO5CQ9NQX4 1742 aa7.65□□□□□ -1.18
RUFY3-201ENST00000226328 PREX2Q70Z35 1606 aa7.65□□□□□ -1.18
RUFY3-201ENST00000226328 THEMISQ8N1K5 641 aaPredicted RBP7.65□□□□□ -1.19
RUFY3-201ENST00000226328 SLC4A1APQ9BWU0 796 aaKnown RBP7.65□□□□□ -1.19
RUFY3-201ENST00000226328 PRKCSHP14314 528 aaPredicted RBP7.64□□□□□ -1.19
RUFY3-201ENST00000226328 NCOA2Q15596 1464 aa7.64□□□□□ -1.19
RUFY3-201ENST00000226328 CDC42BPBQ9Y5S2 1711 aa7.64□□□□□ -1.19
RUFY3-201ENST00000226328 TIAM1Q13009 1591 aa7.64□□□□□ -1.19
RUFY3-201ENST00000226328 CDC42BPAQ5VT25 1732 aa7.64□□□□□ -1.19
RUFY3-201ENST00000226328 RICTORQ6R327 1708 aa7.64□□□□□ -1.19
RUFY3-201ENST00000226328 MIA2Q96PC5 1412 aa7.63□□□□□ -1.19
RUFY3-201ENST00000226328 COL17A1Q9UMD9 1497 aaPredicted RBP7.63□□□□□ -1.19
RUFY3-201ENST00000226328 MAGI2Q86UL8 1455 aa7.62□□□□□ -1.19
RUFY3-201ENST00000226328 LRRC9Q6ZRR7 1453 aa7.62□□□□□ -1.19
RUFY3-201ENST00000226328 ZMYM4Q5VZL5 1548 aa7.62□□□□□ -1.19
RUFY3-201ENST00000226328 CNTLNQ9NXG0 1405 aa7.61□□□□□ -1.19
RUFY3-201ENST00000226328 ZNF644Q9H582 1327 aaPredicted RBP7.61□□□□□ -1.19
RUFY3-201ENST00000226328 ATP10AO60312 1499 aa7.61□□□□□ -1.19
RUFY3-201ENST00000226328 KIF15Q9NS87 1388 aa7.61□□□□□ -1.19
RUFY3-201ENST00000226328 C9orf84Q5VXU9 1444 aa7.61□□□□□ -1.19
RUFY3-201ENST00000226328 ANKLE2Q86XL3 938 aa7.61□□□□□ -1.19
RUFY3-201ENST00000226328 CCDC141Q6ZP82 1450 aa7.61□□□□□ -1.19
RUFY3-201ENST00000226328 KIAA1107Q9UPP5 1409 aa7.61□□□□□ -1.19
RUFY3-201ENST00000226328 PCGF6Q9BYE7 350 aa7.6□□□□□ -1.19
RUFY3-201ENST00000226328 ITSN2Q9NZM3 1697 aa7.6□□□□□ -1.19
RUFY3-201ENST00000226328 TRIM26Q12899 539 aaPredicted RBP7.6□□□□□ -1.19
RUFY3-201ENST00000226328 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.6□□□□□ -1.19
RUFY3-201ENST00000226328 KDM5CP41229 1560 aa7.6□□□□□ -1.19
RUFY3-201ENST00000226328 NUP155O75694 1391 aa7.59□□□□□ -1.19
RUFY3-201ENST00000226328 SUPT6HQ7KZ85 1726 aaKnown RBP7.59□□□□□ -1.19
RUFY3-201ENST00000226328 ABCC1P33527 1531 aa7.59□□□□□ -1.19
RUFY3-201ENST00000226328 ZFYVE16Q7Z3T8 1539 aa7.59□□□□□ -1.19
RUFY3-201ENST00000226328 SAMD9LQ8IVG5 1584 aa7.58□□□□□ -1.2
RUFY3-201ENST00000226328 FGD6Q6ZV73 1430 aa7.58□□□□□ -1.2
RUFY3-201ENST00000226328 CCER1Q8TC90 406 aaPredicted RBP7.58□□□□□ -1.2
RUFY3-201ENST00000226328 GPATCH8Q9UKJ3 1502 aaKnown RBP7.57□□□□□ -1.2
RUFY3-201ENST00000226328 DHX29Q7Z478 1369 aaKnown RBP7.57□□□□□ -1.2
RUFY3-201ENST00000226328 UHRF1BP1Q6BDS2 1440 aa7.57□□□□□ -1.2
RUFY3-201ENST00000226328 ARHGEF40Q8TER5 1519 aa7.57□□□□□ -1.2
RUFY3-201ENST00000226328 CEBPAP49715 358 aaPredicted RBP7.57□□□□□ -1.2
RUFY3-201ENST00000226328 A2MP01023 1474 aa7.56□□□□□ -1.2
RUFY3-201ENST00000226328 SLC52A1Q9NWF4 448 aa7.56□□□□□ -1.2
RUFY3-201ENST00000226328 SIGLEC1Q9BZZ2 1709 aa7.56□□□□□ -1.2
RUFY3-201ENST00000226328 DAXXQ9UER7 740 aaPredicted RBP7.56□□□□□ -1.2
RUFY3-201ENST00000226328 ARHGEF12Q9NZN5 1544 aa7.55□□□□□ -1.2
RUFY3-201ENST00000226328 REREQ9P2R6 1566 aa7.55□□□□□ -1.2
RUFY3-201ENST00000226328 TXNDC2Q86VQ3 553 aa7.55□□□□□ -1.2
RUFY3-201ENST00000226328 RTEL1-TNFRSF6BF6WH68 1400 aa7.54□□□□□ -1.2
RUFY3-201ENST00000226328 INO80Q9ULG1 1556 aaPredicted RBP7.54□□□□□ -1.2
RUFY3-201ENST00000226328 CAMSAP2Q08AD1 1489 aa7.54□□□□□ -1.2
RUFY3-201ENST00000226328 ANKRD50Q9ULJ7 1429 aa7.54□□□□□ -1.2
RUFY3-201ENST00000226328 TRAPPC8Q9Y2L5 1435 aa7.54□□□□□ -1.2
RUFY3-201ENST00000226328 PKD2Q13563 968 aa7.54□□□□□ -1.2
RUFY3-201ENST00000226328 HAP1P54257 671 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms