RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 FYCO1Q9BQS8 1478 aa13.17□□□□□ -0.3
TUBB1-201ENST00000217133 PRKRIP1Q9H875 184 aaPredicted RBP13.17□□□□□ -0.3
TUBB1-201ENST00000217133 ANP32AP39687 249 aaKnown RBP13.16□□□□□ -0.3
TUBB1-201ENST00000217133 CNGB1Q14028 1251 aaPredicted RBP13.16□□□□□ -0.3
TUBB1-201ENST00000217133 CHIC2Q9UKJ5 165 aa13.16□□□□□ -0.3
TUBB1-201ENST00000217133 CASKIN1Q8WXD9 1431 aa13.16□□□□□ -0.3
TUBB1-201ENST00000217133 ZBED9Q6R2W3 1325 aa13.16□□□□□ -0.3
TUBB1-201ENST00000217133 ERCC6L2Q5T890 1561 aa13.16□□□□□ -0.3
TUBB1-201ENST00000217133 FMN1Q68DA7 1419 aa13.15□□□□□ -0.3
TUBB1-201ENST00000217133 CNTLNQ9NXG0 1405 aa13.15□□□□□ -0.3
TUBB1-201ENST00000217133 CCDC136Q96JN2 1154 aa13.14□□□□□ -0.31
TUBB1-201ENST00000217133 PTPRKQ15262 1439 aa13.14□□□□□ -0.31
TUBB1-201ENST00000217133 PLB1Q6P1J6 1458 aa13.13□□□□□ -0.31
TUBB1-201ENST00000217133 PAK3O75914 559 aaPredicted RBP13.13□□□□□ -0.31
TUBB1-201ENST00000217133 NAIPQ13075 1403 aa13.13□□□□□ -0.31
TUBB1-201ENST00000217133 CARMIL2Q6F5E8 1435 aa13.13□□□□□ -0.31
TUBB1-201ENST00000217133 UGGT2Q9NYU1 1516 aa13.12□□□□□ -0.31
TUBB1-201ENST00000217133 PTPRGP23470 1445 aa13.11□□□□□ -0.31
TUBB1-201ENST00000217133 PTPN23Q9H3S7 1636 aa13.11□□□□□ -0.31
TUBB1-201ENST00000217133 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
TUBB1-201ENST00000217133 EFCAB5A4FU69 1503 aa13.11□□□□□ -0.31
TUBB1-201ENST00000217133 POLR3GLQ9BT43 218 aa13.11□□□□□ -0.31
TUBB1-201ENST00000217133 L3MBTL2Q969R5 705 aa13.1□□□□□ -0.31
TUBB1-201ENST00000217133 SAMD9Q5K651 1589 aa13.1□□□□□ -0.31
TUBB1-201ENST00000217133 CCDC7Q96M83 1385 aa13.1□□□□□ -0.31
TUBB1-201ENST00000217133 KIAA0556O60303 1618 aa13.09□□□□□ -0.31
TUBB1-201ENST00000217133 C11orf95C9JLR9 678 aaPredicted RBP13.09□□□□□ -0.31
TUBB1-201ENST00000217133 MYOM3Q5VTT5 1437 aa13.08□□□□□ -0.32
TUBB1-201ENST00000217133 CYB5RLQ6IPT4 315 aa13.07□□□□□ -0.32
TUBB1-201ENST00000217133 IPO9Q96P70 1041 aaKnown RBP13.07□□□□□ -0.32
TUBB1-201ENST00000217133 FOXD1Q16676 465 aa13.07□□□□□ -0.32
TUBB1-201ENST00000217133 NCOA2Q15596 1464 aa13.06□□□□□ -0.32
TUBB1-201ENST00000217133 MPHOSPH9Q99550 1183 aa13.06□□□□□ -0.32
TUBB1-201ENST00000217133 CDK13Q14004 1512 aaKnown RBP13.06□□□□□ -0.32
TUBB1-201ENST00000217133 SENP3-EIF4A1A0A087X0R7 540 aa13.04□□□□□ -0.32
TUBB1-201ENST00000217133 NUDCQ9Y266 331 aa13.04□□□□□ -0.32
TUBB1-201ENST00000217133 KDM5BQ9UGL1 1544 aa13.04□□□□□ -0.32
TUBB1-201ENST00000217133 CLASP1Q7Z460 1538 aa13.04□□□□□ -0.32
TUBB1-201ENST00000217133 AKNAQ7Z591 1439 aa13.04□□□□□ -0.32
TUBB1-201ENST00000217133 NCOA1Q15788 1441 aa13.03□□□□□ -0.32
TUBB1-201ENST00000217133 NPM2Q86SE8 214 aaKnown RBP13.03□□□□□ -0.32
TUBB1-201ENST00000217133 KIF7Q2M1P5 1343 aa13.02□□□□□ -0.32
TUBB1-201ENST00000217133 NUP153P49790 1475 aaKnown RBP13.01□□□□□ -0.33
TUBB1-201ENST00000217133 SMG6Q86US8 1419 aaKnown RBP13□□□□□ -0.33
TUBB1-201ENST00000217133 NBPF8Q3BBV2 869 aa13□□□□□ -0.33
TUBB1-201ENST00000217133 EPRSP07814 1512 aaKnown RBP12.99□□□□□ -0.33
TUBB1-201ENST00000217133 ZNF326Q5BKZ1 582 aaKnown RBP12.99□□□□□ -0.33
TUBB1-201ENST00000217133 PLEKHD1A6NEE1 506 aa12.97□□□□□ -0.33
TUBB1-201ENST00000217133 TMC1Q8TDI8 760 aa12.97□□□□□ -0.33
TUBB1-201ENST00000217133 PRKCSHP14314 528 aaPredicted RBP12.97□□□□□ -0.33
TUBB1-201ENST00000217133 SLC4A1APQ9BWU0 796 aaKnown RBP12.97□□□□□ -0.33
TUBB1-201ENST00000217133 MAGI3Q5TCQ9 1506 aa12.96□□□□□ -0.34
TUBB1-201ENST00000217133 ZNF777Q9ULD5 760 aaPredicted RBP12.96□□□□□ -0.34
TUBB1-201ENST00000217133 ATP10BO94823 1461 aa12.95□□□□□ -0.34
TUBB1-201ENST00000217133 SHROOM2Q13796 1616 aa12.95□□□□□ -0.34
TUBB1-201ENST00000217133 SUPT6HQ7KZ85 1726 aaKnown RBP12.95□□□□□ -0.34
TUBB1-201ENST00000217133 EHBP1L1Q8N3D4 1523 aa12.95□□□□□ -0.34
TUBB1-201ENST00000217133 LAS1LQ9Y4W2 734 aaKnown RBP12.94□□□□□ -0.34
TUBB1-201ENST00000217133 ANO8Q9HCE9 1232 aaPredicted RBP12.94□□□□□ -0.34
TUBB1-201ENST00000217133 RTN4Q9NQC3 1192 aaKnown RBP12.94□□□□□ -0.34
TUBB1-201ENST00000217133 RAPGEF6Q8TEU7 1601 aa12.93□□□□□ -0.34
TUBB1-201ENST00000217133 LRRIQ1Q96JM4 1722 aa12.93□□□□□ -0.34
TUBB1-201ENST00000217133 NEFMP07197 916 aa12.93□□□□□ -0.34
TUBB1-201ENST00000217133 RNF123Q5XPI4 1314 aa12.92□□□□□ -0.34
TUBB1-201ENST00000217133 ZNF644Q9H582 1327 aaPredicted RBP12.92□□□□□ -0.34
TUBB1-201ENST00000217133 DENND4BO75064 1496 aaPredicted RBP12.92□□□□□ -0.34
TUBB1-201ENST00000217133 HECW1Q76N89 1606 aa12.91□□□□□ -0.34
TUBB1-201ENST00000217133 ARHGEF11O15085 1522 aa12.91□□□□□ -0.34
TUBB1-201ENST00000217133 ANKRD30BQ9BXX2 1392 aa12.9□□□□□ -0.34
TUBB1-201ENST00000217133 IL27Q8NEV9 243 aa12.9□□□□□ -0.34
TUBB1-201ENST00000217133 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
TUBB1-201ENST00000217133 TCERG1O14776 1098 aaKnown RBP12.9□□□□□ -0.34
TUBB1-201ENST00000217133 ABCA8O94911 1581 aa12.89□□□□□ -0.35
TUBB1-201ENST00000217133 NPM1P06748 294 aaKnown RBP eCLIP12.89□□□□□ -0.35
TUBB1-201ENST00000217133 RPRD2Q5VT52 1461 aaKnown RBP12.89□□□□□ -0.35
TUBB1-201ENST00000217133 EXOC6Q8TAG9 804 aa12.88□□□□□ -0.35
TUBB1-201ENST00000217133 PNISRQ8TF01 805 aaKnown RBP12.88□□□□□ -0.35
TUBB1-201ENST00000217133 PDE4AP27815 886 aa12.87□□□□□ -0.35
TUBB1-201ENST00000217133 SPATA31E1Q6ZUB1 1445 aa12.87□□□□□ -0.35
TUBB1-201ENST00000217133 RRP1P56182 461 aaKnown RBP12.87□□□□□ -0.35
TUBB1-201ENST00000217133 PPM1GO15355 546 aaPredicted RBP12.87□□□□□ -0.35
TUBB1-201ENST00000217133 USP47Q96K76 1375 aa12.87□□□□□ -0.35
TUBB1-201ENST00000217133 TCOF1Q13428 1488 aaKnown RBP12.87□□□□□ -0.35
TUBB1-201ENST00000217133 KDM6BO15054 1643 aa12.87□□□□□ -0.35
TUBB1-201ENST00000217133 DHX29Q7Z478 1369 aaKnown RBP12.86□□□□□ -0.35
TUBB1-201ENST00000217133 USP35Q9P2H5 1018 aa12.86□□□□□ -0.35
TUBB1-201ENST00000217133 CFDP1Q9UEE9 299 aaPredicted RBP12.86□□□□□ -0.35
TUBB1-201ENST00000217133 GCC2Q8IWJ2 1684 aa12.85□□□□□ -0.35
TUBB1-201ENST00000217133 RCAN3Q9UKA8 241 aa12.85□□□□□ -0.35
TUBB1-201ENST00000217133 TEX14Q8IWB6 1497 aa12.84□□□□□ -0.35
TUBB1-201ENST00000217133 ABCC2Q92887 1545 aa12.84□□□□□ -0.35
TUBB1-201ENST00000217133 TROQ12816 1431 aaPredicted RBP12.84□□□□□ -0.35
TUBB1-201ENST00000217133 MIA2Q96PC5 1412 aa12.84□□□□□ -0.35
TUBB1-201ENST00000217133 DAXXQ9UER7 740 aaPredicted RBP12.83□□□□□ -0.36
TUBB1-201ENST00000217133 CARD11Q9BXL7 1154 aa12.82□□□□□ -0.36
TUBB1-201ENST00000217133 BACH2Q9BYV9 841 aa12.82□□□□□ -0.36
TUBB1-201ENST00000217133 ROCK2O75116 1388 aaKnown RBP12.81□□□□□ -0.36
TUBB1-201ENST00000217133 ARID4BQ4LE39 1312 aaPredicted RBP12.81□□□□□ -0.36
TUBB1-201ENST00000217133 MS4A1P11836 297 aa12.81□□□□□ -0.36
TUBB1-201ENST00000217133 ADCY10Q96PN6 1610 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms