RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 4933416C03RikQ3V063 378 aa17.67■□□□□ 0.42
Pdgfra-205ENSMUST00000201711 Nup155Q99P88 1391 aaKnown RBP17.67■□□□□ 0.42
Pdgfra-205ENSMUST00000201711 Trim26Q99PN3 545 aa17.67■□□□□ 0.42
Pdgfra-205ENSMUST00000201711 Hdac5Q9Z2V6 1113 aa17.67■□□□□ 0.42
Pdgfra-205ENSMUST00000201711 UacaQ8CGB3 1411 aa17.67■□□□□ 0.42
Pdgfra-205ENSMUST00000201711 Ecm2Q5FW85 670 aa17.67■□□□□ 0.42
Pdgfra-205ENSMUST00000201711 Amer1Q7TS75 1132 aa17.66■□□□□ 0.42
Pdgfra-205ENSMUST00000201711 Cux1P53564 1515 aa17.66■□□□□ 0.42
Pdgfra-205ENSMUST00000201711 Srpk2O54781 681 aaKnown RBP17.65■□□□□ 0.42
Pdgfra-205ENSMUST00000201711 Neurod2Q62414 383 aa17.64■□□□□ 0.41
Pdgfra-205ENSMUST00000201711 Safb2Q80YR5 991 aaKnown RBP17.63■□□□□ 0.41
Pdgfra-205ENSMUST00000201711 Bcl11aQ9QYE3 773 aa17.63■□□□□ 0.41
Pdgfra-205ENSMUST00000201711 CadpsQ80TJ1 1355 aa17.63■□□□□ 0.41
Pdgfra-205ENSMUST00000201711 Cc2d2bA0A286YDU8 1405 aa17.63■□□□□ 0.41
Pdgfra-205ENSMUST00000201711 Gm7298A0A0N4SVU1 1476 aa17.62■□□□□ 0.41
Pdgfra-205ENSMUST00000201711 Plb1Q3TTY0 1478 aa17.62■□□□□ 0.41
Pdgfra-205ENSMUST00000201711 Ppp1r18Q8BQ30 594 aa17.62■□□□□ 0.41
Pdgfra-205ENSMUST00000201711 EprsQ8CGC7 1512 aaKnown RBP17.61■□□□□ 0.41
Pdgfra-205ENSMUST00000201711 Jph4Q80WT0 628 aa17.61■□□□□ 0.41
Pdgfra-205ENSMUST00000201711 Pcf11G3X9Z4 1553 aa17.61■□□□□ 0.41
Pdgfra-205ENSMUST00000201711 Kif3bQ61771 747 aa17.59■□□□□ 0.41
Pdgfra-205ENSMUST00000201711 Smg6P61406 1418 aaKnown RBP17.58■□□□□ 0.4
Pdgfra-205ENSMUST00000201711 Vps8Q0P5W1 1427 aa17.58■□□□□ 0.4
Pdgfra-205ENSMUST00000201711 Mrc2Q64449 1479 aa17.57■□□□□ 0.4
Pdgfra-205ENSMUST00000201711 Arhgap31A6X8Z5 1425 aa17.54■□□□□ 0.4
Pdgfra-205ENSMUST00000201711 Dhx57Q6P5D3 1388 aaKnown RBP17.54■□□□□ 0.4
Pdgfra-205ENSMUST00000201711 Polr1aO35134 1717 aaKnown RBP17.52■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 Ankrd36D3Z4K0 1415 aa17.52■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 Lemd3Q9WU40 921 aa17.52■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 Slx4Q6P1D7 1565 aa17.51■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 DaxxO35613 739 aa17.51■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 Ankrd26Q811D2 1581 aa17.5■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 Pabpn1Q8CCS6 302 aaKnown RBP17.5■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 Upf2A2AT37 1269 aaKnown RBP17.5■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 Stag3O70576 1240 aa17.5■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 3425401B19RikD3Z1D3 1412 aa17.49■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 Dhx9O70133 1380 aaKnown RBP17.49■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 Stk26Q99JT2 416 aa17.48■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 Znf710Q3U288 666 aa17.48■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 Exosc9Q9JHI7 438 aaKnown RBP17.48■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 Ift140E9PY46 1464 aa17.48■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 Dapk1Q80YE7 1442 aa17.47■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 SynmQ70IV5 1561 aa17.47■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 Slc4a1apE9PX68 744 aa17.47■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 Dbr1Q923B1 550 aa17.47■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 A2mQ6GQT1 1474 aa17.46■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 Ttll5Q8CHB8 1328 aa17.46■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 Srcin1Q9QWI6 1250 aa17.46■□□□□ 0.39
Pdgfra-205ENSMUST00000201711 Zscan21Q07231 555 aa17.46■□□□□ 0.38
Pdgfra-205ENSMUST00000201711 Fan1Q69ZT1 1020 aa17.45■□□□□ 0.38
Pdgfra-205ENSMUST00000201711 Soga1E1U8D0 1418 aa17.45■□□□□ 0.38
Pdgfra-205ENSMUST00000201711 Naip2Q9QUK4 1447 aa17.44■□□□□ 0.38
Pdgfra-205ENSMUST00000201711 IqubQ8CDK3 788 aa17.44■□□□□ 0.38
Pdgfra-205ENSMUST00000201711 B4galnt3Q6L8S8 986 aa17.43■□□□□ 0.38
Pdgfra-205ENSMUST00000201711 TnnQ80Z71 1560 aa17.43■□□□□ 0.38
Pdgfra-205ENSMUST00000201711 Inpp5dQ9ES52 1191 aa17.43■□□□□ 0.38
Pdgfra-205ENSMUST00000201711 Spag9Q58A65 1321 aaKnown RBP17.43■□□□□ 0.38
Pdgfra-205ENSMUST00000201711 Crocc2F6XLV1 1638 aa17.43■□□□□ 0.38
Pdgfra-205ENSMUST00000201711 Nolc1E9Q5C9 702 aaKnown RBP17.42■□□□□ 0.38
Pdgfra-205ENSMUST00000201711 Pank3Q8R2W9 370 aa17.42■□□□□ 0.38
Pdgfra-205ENSMUST00000201711 Rock2P70336 1388 aa17.42■□□□□ 0.38
Pdgfra-205ENSMUST00000201711 Dcaf11Q91VU6 549 aa17.42■□□□□ 0.38
Pdgfra-205ENSMUST00000201711 Gtf2e1Q9D0D5 440 aa17.41■□□□□ 0.38
Pdgfra-205ENSMUST00000201711 Grin2aP35436 1464 aa17.4■□□□□ 0.38
Pdgfra-205ENSMUST00000201711 CrbnQ8C7D2 445 aa17.4■□□□□ 0.38
Pdgfra-205ENSMUST00000201711 Map3k5O35099 1380 aa17.4■□□□□ 0.38
Pdgfra-205ENSMUST00000201711 NexmifQ5DTT1 1515 aa17.4■□□□□ 0.38
Pdgfra-205ENSMUST00000201711 MyclP10166 368 aa17.39■□□□□ 0.37
Pdgfra-205ENSMUST00000201711 Supt16hQ920B9 1047 aa17.39■□□□□ 0.37
Pdgfra-205ENSMUST00000201711 Tmf1B9EKI3 1091 aa17.38■□□□□ 0.37
Pdgfra-205ENSMUST00000201711 Slc4a2P13808 1237 aaKnown RBP17.38■□□□□ 0.37
Pdgfra-205ENSMUST00000201711 Armcx1Q9CX83 456 aa17.37■□□□□ 0.37
Pdgfra-205ENSMUST00000201711 Speer4f1Q9D5Q6 258 aa17.37■□□□□ 0.37
Pdgfra-205ENSMUST00000201711 Mak16Q8BGS0 296 aaKnown RBP17.36■□□□□ 0.37
Pdgfra-205ENSMUST00000201711 Abcc5Q9R1X5 1436 aa17.35■□□□□ 0.37
Pdgfra-205ENSMUST00000201711 Mug1P28665 1476 aa17.35■□□□□ 0.37
Pdgfra-205ENSMUST00000201711 Gm1043A0A140LJC2 1431 aa17.35■□□□□ 0.37
Pdgfra-205ENSMUST00000201711 Trim30dE9PWL0 497 aa17.35■□□□□ 0.37
Pdgfra-205ENSMUST00000201711 NgefQ8CHT1 710 aa17.35■□□□□ 0.37
Pdgfra-205ENSMUST00000201711 Senp3Q9EP97 568 aaKnown RBP17.34■□□□□ 0.37
Pdgfra-205ENSMUST00000201711 Gpatch8A2A6A1 1505 aa17.33■□□□□ 0.37
Pdgfra-205ENSMUST00000201711 TchhA0A0B4J1F9 1599 aa17.33■□□□□ 0.37
Pdgfra-205ENSMUST00000201711 Ncoa2Q61026 1462 aa17.33■□□□□ 0.36
Pdgfra-205ENSMUST00000201711 Rpgrip1lQ8CG73 1264 aa17.32■□□□□ 0.36
Pdgfra-205ENSMUST00000201711 Samd9lQ69Z37 1561 aa17.32■□□□□ 0.36
Pdgfra-205ENSMUST00000201711 Pde4cQ3UEI1 686 aa17.32■□□□□ 0.36
Pdgfra-205ENSMUST00000201711 Esx1O88933 382 aa17.31■□□□□ 0.36
Pdgfra-205ENSMUST00000201711 Plin1Q8CGN5 517 aa17.31■□□□□ 0.36
Pdgfra-205ENSMUST00000201711 Znf316Q6PGE4 1016 aa17.3■□□□□ 0.36
Pdgfra-205ENSMUST00000201711 Q7TT23 1179 aa17.29■□□□□ 0.36
Pdgfra-205ENSMUST00000201711 CanxP35564 591 aaKnown RBP17.29■□□□□ 0.36
Pdgfra-205ENSMUST00000201711 Irx6Q9ER75 438 aa17.29■□□□□ 0.36
Pdgfra-205ENSMUST00000201711 Fam163aQ8CAA5 168 aa17.28■□□□□ 0.36
Pdgfra-205ENSMUST00000201711 Ccdc9Q8VC31 543 aaKnown RBP17.28■□□□□ 0.36
Pdgfra-205ENSMUST00000201711 Ccdc27Q3V036 639 aa17.27■□□□□ 0.36
Pdgfra-205ENSMUST00000201711 Thoc2B1AZI6 1594 aaKnown RBP17.27■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 Neo1P97798 1493 aa17.26■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 PxdnQ3UQ28 1475 aa17.26■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 Ncoa3O09000 1398 aa17.26■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 4930567H17RikQ3V0K5 233 aa17.26■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms