RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Rhox8Q6VSS7 320 aa24.27■■□□□ 1.48
Pdgfra-205ENSMUST00000201711 NischQ80TM9 1593 aa23.24■■□□□ 1.31
Pdgfra-205ENSMUST00000201711 Ccdc136Q3TVA9 1136 aa22.16■■□□□ 1.14
Pdgfra-205ENSMUST00000201711 Ehmt2Q9Z148 1263 aaKnown RBP22.03■■□□□ 1.12
Pdgfra-205ENSMUST00000201711 Abcc9P70170 1546 aa22.02■■□□□ 1.12
Pdgfra-205ENSMUST00000201711 Rpgrip1Q9EPQ2 1331 aa21.64■■□□□ 1.05
Pdgfra-205ENSMUST00000201711 Abcc8B2RUS7 1588 aa21.63■■□□□ 1.05
Pdgfra-205ENSMUST00000201711 Cngb1E1AZ71 1325 aa21.39■■□□□ 1.01
Pdgfra-205ENSMUST00000201711 Trim41Q5NCC3 630 aa21.33■■□□□ 1.01
Pdgfra-205ENSMUST00000201711 Gab3Q8BSM5 595 aa21.29■■□□□ 1
Pdgfra-205ENSMUST00000201711 Esf1Q3V1V3 845 aaKnown RBP21.23■□□□□ 0.99
Pdgfra-205ENSMUST00000201711 Gm35339A0A140LHH9 1649 aa21.21■□□□□ 0.99
Pdgfra-205ENSMUST00000201711 Ccdc180J3QNE4 1664 aa20.96■□□□□ 0.95
Pdgfra-205ENSMUST00000201711 Zcchc6Q5BLK4 1491 aaKnown RBP20.89■□□□□ 0.93
Pdgfra-205ENSMUST00000201711 Rtl1Q7M732 1744 aa20.83■□□□□ 0.93
Pdgfra-205ENSMUST00000201711 HrcG5E8J6 738 aa20.73■□□□□ 0.91
Pdgfra-205ENSMUST00000201711 Myt1lP97500 1187 aa20.68■□□□□ 0.9
Pdgfra-205ENSMUST00000201711 Acin1Q9JIX8 1338 aaKnown RBP20.67■□□□□ 0.9
Pdgfra-205ENSMUST00000201711 Zeb1Q64318 1117 aa20.63■□□□□ 0.89
Pdgfra-205ENSMUST00000201711 Npm2Q80W85 207 aa20.57■□□□□ 0.88
Pdgfra-205ENSMUST00000201711 Rb1cc1Q9ESK9 1588 aa20.38■□□□□ 0.85
Pdgfra-205ENSMUST00000201711 UbtfP25976 765 aaKnown RBP20.36■□□□□ 0.85
Pdgfra-205ENSMUST00000201711 Wdr66E9Q743 1299 aa20.34■□□□□ 0.85
Pdgfra-205ENSMUST00000201711 Il27Q8K3I6 234 aa20.29■□□□□ 0.84
Pdgfra-205ENSMUST00000201711 Dcaf1Q80TR8 1506 aa20.22■□□□□ 0.83
Pdgfra-205ENSMUST00000201711 Chic1Q8CBW7 227 aa20.17■□□□□ 0.82
Pdgfra-205ENSMUST00000201711 Las1lA2BE28 776 aaKnown RBP20.14■□□□□ 0.81
Pdgfra-205ENSMUST00000201711 Pcgf6Q99NA9 353 aa20.13■□□□□ 0.81
Pdgfra-205ENSMUST00000201711 Ube2uB1AUC4 352 aa19.99■□□□□ 0.79
Pdgfra-205ENSMUST00000201711 NacadQ5SWP3 1504 aa19.99■□□□□ 0.79
Pdgfra-205ENSMUST00000201711 Kdm5dQ62240 1548 aa19.99■□□□□ 0.79
Pdgfra-205ENSMUST00000201711 Ap3b1Q9Z1T1 1105 aa19.95■□□□□ 0.78
Pdgfra-205ENSMUST00000201711 Baz1aO88379 1555 aa19.94■□□□□ 0.78
Pdgfra-205ENSMUST00000201711 NefmP08553 848 aa19.91■□□□□ 0.78
Pdgfra-205ENSMUST00000201711 Ppargc1bQ8VHJ7 1014 aa19.91■□□□□ 0.78
Pdgfra-205ENSMUST00000201711 Supt5hO55201 1082 aaKnown RBP19.86■□□□□ 0.77
Pdgfra-205ENSMUST00000201711 Mier1Q5UAK0 511 aa19.84■□□□□ 0.77
Pdgfra-205ENSMUST00000201711 Brd4Q9ESU6 1400 aaKnown RBP19.83■□□□□ 0.76
Pdgfra-205ENSMUST00000201711 Cep164Q5DU05 1446 aa19.8■□□□□ 0.76
Pdgfra-205ENSMUST00000201711 ScribQ80U72 1612 aa19.77■□□□□ 0.76
Pdgfra-205ENSMUST00000201711 Plekhg3Q4VAC9 1341 aa19.71■□□□□ 0.75
Pdgfra-205ENSMUST00000201711 Fam50aQ9WV03 339 aaKnown RBP19.6■□□□□ 0.73
Pdgfra-205ENSMUST00000201711 Rsf1E9PWW9 1441 aaKnown RBP19.55■□□□□ 0.72
Pdgfra-205ENSMUST00000201711 Lmod2Q3UHZ5 550 aa19.5■□□□□ 0.71
Pdgfra-205ENSMUST00000201711 Golga3P55937 1487 aa19.44■□□□□ 0.7
Pdgfra-205ENSMUST00000201711 Npm1Q61937 292 aaKnown RBP19.41■□□□□ 0.7
Pdgfra-205ENSMUST00000201711 Eid3Q3V124 375 aa19.39■□□□□ 0.69
Pdgfra-205ENSMUST00000201711 Ccdc88bQ4QRL3 1481 aa19.39■□□□□ 0.69
Pdgfra-205ENSMUST00000201711 Cecr2E9Q2Z1 1453 aa19.35■□□□□ 0.69
Pdgfra-205ENSMUST00000201711 Sycp2Q9CUU3 1500 aa19.34■□□□□ 0.69
Pdgfra-205ENSMUST00000201711 TonslQ6NZL6 1363 aa19.33■□□□□ 0.69
Pdgfra-205ENSMUST00000201711 Slc24a1Q91WD8 1130 aa19.33■□□□□ 0.68
Pdgfra-205ENSMUST00000201711 Clip1Q922J3 1391 aa19.32■□□□□ 0.68
Pdgfra-205ENSMUST00000201711 Sall2Q9QX96 1004 aa19.3■□□□□ 0.68
Pdgfra-205ENSMUST00000201711 Neurod1Q60867 357 aa19.28■□□□□ 0.68
Pdgfra-205ENSMUST00000201711 Cdk11bP24788 784 aaKnown RBP19.27■□□□□ 0.68
Pdgfra-205ENSMUST00000201711 Nop58Q6DFW4 536 aaKnown RBP19.25■□□□□ 0.67
Pdgfra-205ENSMUST00000201711 NclP09405 707 aaKnown RBP19.24■□□□□ 0.67
Pdgfra-205ENSMUST00000201711 Ubl4bQ9CQ84 188 aa19.2■□□□□ 0.66
Pdgfra-205ENSMUST00000201711 Mapk8ip2Q9ERE9 830 aa19.2■□□□□ 0.66
Pdgfra-205ENSMUST00000201711 Smarca2Q6DIC0 1577 aa19.2■□□□□ 0.66
Pdgfra-205ENSMUST00000201711 CenpbP27790 599 aa19.09■□□□□ 0.65
Pdgfra-205ENSMUST00000201711 Crybg2B7ZCC2 1516 aa19.09■□□□□ 0.65
Pdgfra-205ENSMUST00000201711 Kif15Q6P9L6 1387 aa19.06■□□□□ 0.64
Pdgfra-205ENSMUST00000201711 CftrP26361 1476 aa19.05■□□□□ 0.64
Pdgfra-205ENSMUST00000201711 Aebp2Q9Z248 504 aaKnown RBP19.01■□□□□ 0.63
Pdgfra-205ENSMUST00000201711 Synj1Q8CHC4 1574 aa19.01■□□□□ 0.63
Pdgfra-205ENSMUST00000201711 Zbtb7cQ8VCZ7 619 aa19■□□□□ 0.63
Pdgfra-205ENSMUST00000201711 ClspnQ80YR7 1315 aa18.99■□□□□ 0.63
Pdgfra-205ENSMUST00000201711 Setd5Q5XJV7 1441 aa18.95■□□□□ 0.62
Pdgfra-205ENSMUST00000201711 Myt1Q8CFC2 1127 aa18.92■□□□□ 0.62
Pdgfra-205ENSMUST00000201711 BlmO88700 1416 aa18.92■□□□□ 0.62
Pdgfra-205ENSMUST00000201711 Anks4bQ8K3X6 423 aa18.9■□□□□ 0.62
Pdgfra-205ENSMUST00000201711 Fkbp15Q6P9Q6 1216 aaKnown RBP18.89■□□□□ 0.61
Pdgfra-205ENSMUST00000201711 Chic2Q9D9G3 165 aa18.88■□□□□ 0.61
Pdgfra-205ENSMUST00000201711 Cep162Q6ZQ06 1403 aa18.82■□□□□ 0.6
Pdgfra-205ENSMUST00000201711 Gm38655A0A286YDK6 273 aa18.81■□□□□ 0.6
Pdgfra-205ENSMUST00000201711 Ifnlr1Q8CGK5 535 aa18.79■□□□□ 0.6
Pdgfra-205ENSMUST00000201711 Fmn1Q05860 1466 aa18.78■□□□□ 0.6
Pdgfra-205ENSMUST00000201711 Stra8P70278 393 aa18.78■□□□□ 0.6
Pdgfra-205ENSMUST00000201711 Eif5bQ05D44 1216 aaKnown RBP18.78■□□□□ 0.6
Pdgfra-205ENSMUST00000201711 Zbtb4Q5F293 982 aa18.76■□□□□ 0.59
Pdgfra-205ENSMUST00000201711 Csrnp3P59055 597 aa18.74■□□□□ 0.59
Pdgfra-205ENSMUST00000201711 Eea1Q8BL66 1411 aa18.73■□□□□ 0.59
Pdgfra-205ENSMUST00000201711 Ercc6F8VPZ5 1481 aa18.72■□□□□ 0.59
Pdgfra-205ENSMUST00000201711 Rapgef2Q8CHG7 1496 aa18.72■□□□□ 0.59
Pdgfra-205ENSMUST00000201711 Pds5bQ4VA53 1446 aaKnown RBP18.71■□□□□ 0.59
Pdgfra-205ENSMUST00000201711 Hnrnpul2Q00PI9 745 aaKnown RBP18.67■□□□□ 0.58
Pdgfra-205ENSMUST00000201711 NrdcQ8BHG1 1161 aa18.65■□□□□ 0.58
Pdgfra-205ENSMUST00000201711 Smarca4Q3TKT4 1613 aaKnown RBP18.65■□□□□ 0.58
Pdgfra-205ENSMUST00000201711 Ccdc18Q640L5 1455 aa18.65■□□□□ 0.58
Pdgfra-205ENSMUST00000201711 1700123L14RikQ3V2K7 440 aa18.64■□□□□ 0.57
Pdgfra-205ENSMUST00000201711 Aplp2Q06335 707 aa18.61■□□□□ 0.57
Pdgfra-205ENSMUST00000201711 Atad2bE9Q166 1460 aaKnown RBP18.58■□□□□ 0.56
Pdgfra-205ENSMUST00000201711 Tnnt3Q9QZ47 272 aa18.57■□□□□ 0.56
Pdgfra-205ENSMUST00000201711 Cttnbp2B9EJA2 1648 aa18.57■□□□□ 0.56
Pdgfra-205ENSMUST00000201711 Os9Q8K2C7 672 aa18.56■□□□□ 0.56
Pdgfra-205ENSMUST00000201711 BicraF8VPZ9 1578 aa18.55■□□□□ 0.56
Pdgfra-205ENSMUST00000201711 Pelp1Q9DBD5 1123 aaKnown RBP18.54■□□□□ 0.56
Pdgfra-205ENSMUST00000201711 Iqgap2Q3UQ44 1575 aa18.48■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms