RNA–Protein interactions for RNA: ENSMUST00000199571.4

Csde1-216, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Csde1, Length 3,123 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-216ENSMUST00000199571 Neo1P97798 1493 aa11.12□□□□□ -0.63
Csde1-216ENSMUST00000199571 Brwd3A2AHJ4 1799 aa11.12□□□□□ -0.63
Csde1-216ENSMUST00000199571 Grin2bQ01097 1482 aa11.11□□□□□ -0.63
Csde1-216ENSMUST00000199571 Gm14025A2AP89 1413 aa11.1□□□□□ -0.63
Csde1-216ENSMUST00000199571 Arhgap27A2AB59 869 aa11.09□□□□□ -0.63
Csde1-216ENSMUST00000199571 Upf2A2AT37 1269 aaKnown RBP11.09□□□□□ -0.63
Csde1-216ENSMUST00000199571 Efcab5A0JP43 1406 aa11.09□□□□□ -0.63
Csde1-216ENSMUST00000199571 DaxxO35613 739 aa11.09□□□□□ -0.63
Csde1-216ENSMUST00000199571 NrdcQ8BHG1 1161 aa11.09□□□□□ -0.63
Csde1-216ENSMUST00000199571 Egfem1Q8C088 590 aa11.08□□□□□ -0.64
Csde1-216ENSMUST00000199571 Ccer2J3QPU5 274 aa11.07□□□□□ -0.64
Csde1-216ENSMUST00000199571 ChgaP26339 463 aaKnown RBP11.07□□□□□ -0.64
Csde1-216ENSMUST00000199571 Dnajc5gQ8C632 165 aa11.07□□□□□ -0.64
Csde1-216ENSMUST00000199571 Zbtb4Q5F293 982 aa11.06□□□□□ -0.64
Csde1-216ENSMUST00000199571 Gtf3c3Q3TMP1 882 aa11.05□□□□□ -0.64
Csde1-216ENSMUST00000199571 Dnmt1P13864 1620 aaKnown RBP11.05□□□□□ -0.64
Csde1-216ENSMUST00000199571 Arap1Q4LDD4 1452 aa11.05□□□□□ -0.64
Csde1-216ENSMUST00000199571 Arid3cA6PWV5 409 aa11.05□□□□□ -0.64
Csde1-216ENSMUST00000199571 Fndc1E9Q043 1732 aa11.05□□□□□ -0.64
Csde1-216ENSMUST00000199571 Gm13697A2AK42 830 aa11.04□□□□□ -0.64
Csde1-216ENSMUST00000199571 Zbtb7cQ8VCZ7 619 aa11.04□□□□□ -0.64
Csde1-216ENSMUST00000199571 Depdc5P61460 1591 aa11.04□□□□□ -0.64
Csde1-216ENSMUST00000199571 Ccdc27Q3V036 639 aa11.04□□□□□ -0.64
Csde1-216ENSMUST00000199571 Exoc6Q8R313 802 aa11.04□□□□□ -0.64
Csde1-216ENSMUST00000199571 Slc4a2P13808 1237 aaKnown RBP11.04□□□□□ -0.64
Csde1-216ENSMUST00000199571 Eea1Q8BL66 1411 aa11.03□□□□□ -0.64
Csde1-216ENSMUST00000199571 Washc2Q6PGL7 1334 aa11.03□□□□□ -0.64
Csde1-216ENSMUST00000199571 Smg6P61406 1418 aaKnown RBP11.02□□□□□ -0.64
Csde1-216ENSMUST00000199571 GapdhsQ64467 440 aa11.02□□□□□ -0.64
Csde1-216ENSMUST00000199571 Zfyve16Q80U44 1528 aa11.02□□□□□ -0.65
Csde1-216ENSMUST00000199571 Arhgef12Q8R4H2 1543 aaKnown RBP11□□□□□ -0.65
Csde1-216ENSMUST00000199571 Fmn1Q05860 1466 aa10.99□□□□□ -0.65
Csde1-216ENSMUST00000199571 Pla2r1Q62028 1487 aa10.98□□□□□ -0.65
Csde1-216ENSMUST00000199571 NrkQ9R0G8 1455 aa10.98□□□□□ -0.65
Csde1-216ENSMUST00000199571 ArxO35085 564 aa10.98□□□□□ -0.65
Csde1-216ENSMUST00000199571 BC005561E9Q5E2 1589 aa10.98□□□□□ -0.65
Csde1-216ENSMUST00000199571 Kdm6bQ5NCY0 1641 aa10.97□□□□□ -0.65
Csde1-216ENSMUST00000199571 Hsp90aa1P07901 733 aaKnown RBP10.97□□□□□ -0.65
Csde1-216ENSMUST00000199571 Kdm5bQ80Y84 1544 aa10.96□□□□□ -0.65
Csde1-216ENSMUST00000199571 Map3k4O08648 1597 aa10.96□□□□□ -0.65
Csde1-216ENSMUST00000199571 Ecm2Q5FW85 670 aa10.96□□□□□ -0.66
Csde1-216ENSMUST00000199571 Gpatch8A2A6A1 1505 aa10.96□□□□□ -0.66
Csde1-216ENSMUST00000199571 Irx3P81067 507 aa10.95□□□□□ -0.66
Csde1-216ENSMUST00000199571 Rad21Q61550 635 aaKnown RBP10.95□□□□□ -0.66
Csde1-216ENSMUST00000199571 Ofd1Q80Z25 1017 aa10.95□□□□□ -0.66
Csde1-216ENSMUST00000199571 Abcc2Q8VI47 1543 aa10.94□□□□□ -0.66
Csde1-216ENSMUST00000199571 Arhgap35Q91YM2 1499 aa10.93□□□□□ -0.66
Csde1-216ENSMUST00000199571 B4galnt3Q6L8S8 986 aa10.93□□□□□ -0.66
Csde1-216ENSMUST00000199571 Dbr1Q923B1 550 aa10.93□□□□□ -0.66
Csde1-216ENSMUST00000199571 Fkbp15Q6P9Q6 1216 aaKnown RBP10.92□□□□□ -0.66
Csde1-216ENSMUST00000199571 Ipo9Q91YE6 1041 aa10.92□□□□□ -0.66
Csde1-216ENSMUST00000199571 Znf692Q3U381 531 aa10.92□□□□□ -0.66
Csde1-216ENSMUST00000199571 Jph4Q80WT0 628 aa10.92□□□□□ -0.66
Csde1-216ENSMUST00000199571 Igf1rQ60751 1373 aa10.91□□□□□ -0.66
Csde1-216ENSMUST00000199571 L3mbtl2P59178 703 aa10.9□□□□□ -0.66
Csde1-216ENSMUST00000199571 Lrrc9Q8CDN9 1456 aa10.89□□□□□ -0.67
Csde1-216ENSMUST00000199571 Naip2Q9QUK4 1447 aa10.88□□□□□ -0.67
Csde1-216ENSMUST00000199571 PxdnQ3UQ28 1475 aa10.88□□□□□ -0.67
Csde1-216ENSMUST00000199571 TchhA0A0B4J1F9 1599 aa10.88□□□□□ -0.67
Csde1-216ENSMUST00000199571 Fgd1P52734 960 aa10.87□□□□□ -0.67
Csde1-216ENSMUST00000199571 Abca16E9PWJ7 1678 aa10.87□□□□□ -0.67
Csde1-216ENSMUST00000199571 SynmQ70IV5 1561 aa10.87□□□□□ -0.67
Csde1-216ENSMUST00000199571 Iqcf3Q9D498 203 aa10.87□□□□□ -0.67
Csde1-216ENSMUST00000199571 Rnf17Q99MV7 1640 aa10.86□□□□□ -0.67
Csde1-216ENSMUST00000199571 Naip1Q9QWK5 1403 aa10.86□□□□□ -0.67
Csde1-216ENSMUST00000199571 Slx4Q6P1D7 1565 aa10.85□□□□□ -0.67
Csde1-216ENSMUST00000199571 Pknox2Q8BG99 474 aa10.85□□□□□ -0.67
Csde1-216ENSMUST00000199571 Tcerg1Q8CGF7 1100 aaKnown RBP10.85□□□□□ -0.67
Csde1-216ENSMUST00000199571 CanxP35564 591 aaKnown RBP10.84□□□□□ -0.67
Csde1-216ENSMUST00000199571 PtprmP28828 1452 aa10.84□□□□□ -0.67
Csde1-216ENSMUST00000199571 Zfp644E9QA22 1323 aa10.84□□□□□ -0.67
Csde1-216ENSMUST00000199571 Spryd3E9Q9B3 442 aa10.83□□□□□ -0.68
Csde1-216ENSMUST00000199571 Apbb1Q9QXJ1 710 aa10.83□□□□□ -0.68
Csde1-216ENSMUST00000199571 3425401B19RikD3Z1D3 1412 aa10.83□□□□□ -0.68
Csde1-216ENSMUST00000199571 WizO88286 1684 aaKnown RBP10.83□□□□□ -0.68
Csde1-216ENSMUST00000199571 Znf608Q56A10 1511 aa10.83□□□□□ -0.68
Csde1-216ENSMUST00000199571 Rgl3Q3UYI5 709 aa10.82□□□□□ -0.68
Csde1-216ENSMUST00000199571 Taok2Q6ZQ29 1240 aa10.82□□□□□ -0.68
Csde1-216ENSMUST00000199571 AglF8VPN4 1532 aa10.82□□□□□ -0.68
Csde1-216ENSMUST00000199571 Eif4g1Q6NZJ6 1600 aaKnown RBP10.81□□□□□ -0.68
Csde1-216ENSMUST00000199571 Wdr7Q920I9 1489 aa10.8□□□□□ -0.68
Csde1-216ENSMUST00000199571 Grwd1Q810D6 446 aaKnown RBP10.8□□□□□ -0.68
Csde1-216ENSMUST00000199571 UacaQ8CGB3 1411 aa10.79□□□□□ -0.68
Csde1-216ENSMUST00000199571 NeflP08551 543 aa10.79□□□□□ -0.68
Csde1-216ENSMUST00000199571 MyclP10166 368 aa10.79□□□□□ -0.68
Csde1-216ENSMUST00000199571 Rtn4Q99P72 1162 aaKnown RBP10.79□□□□□ -0.68
Csde1-216ENSMUST00000199571 Sart3Q9JLI8 962 aaKnown RBP10.79□□□□□ -0.68
Csde1-216ENSMUST00000199571 Mphosph9A6H5Y1 991 aa10.78□□□□□ -0.68
Csde1-216ENSMUST00000199571 Adamts12Q811B3 1600 aa10.78□□□□□ -0.68
Csde1-216ENSMUST00000199571 Gm13695A2AK44 830 aa10.78□□□□□ -0.68
Csde1-216ENSMUST00000199571 PnisrA2AJT4 805 aaKnown RBP10.76□□□□□ -0.69
Csde1-216ENSMUST00000199571 Pkd2O35245 966 aa10.75□□□□□ -0.69
Csde1-216ENSMUST00000199571 Tiam1Q60610 1591 aa10.75□□□□□ -0.69
Csde1-216ENSMUST00000199571 Prdm10Q3UTQ7 1184 aa10.74□□□□□ -0.69
Csde1-216ENSMUST00000199571 4930567H17RikQ3V0K5 233 aa10.73□□□□□ -0.69
Csde1-216ENSMUST00000199571 Naip5Q9R016 1403 aa10.73□□□□□ -0.69
Csde1-216ENSMUST00000199571 Erbb3Q61526 1339 aa10.73□□□□□ -0.69
Csde1-216ENSMUST00000199571 Ttll13A4Q9F6 804 aa10.72□□□□□ -0.69
Csde1-216ENSMUST00000199571 Aebp1Q640N1 1128 aa10.72□□□□□ -0.69
Csde1-216ENSMUST00000199571 Shroom4Q1W617 1475 aa10.72□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms