RNA–Protein interactions for RNA: ENSMUST00000199571.4

Csde1-216, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Csde1, Length 3,123 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-216ENSMUST00000199571 Gm35339A0A140LHH9 1649 aa14.95□□□□□ -0.02
Csde1-216ENSMUST00000199571 Abcc9P70170 1546 aa14.76□□□□□ -0.05
Csde1-216ENSMUST00000199571 NischQ80TM9 1593 aa14.52□□□□□ -0.08
Csde1-216ENSMUST00000199571 Abcc8B2RUS7 1588 aa14.23□□□□□ -0.13
Csde1-216ENSMUST00000199571 ScribQ80U72 1612 aa14.11□□□□□ -0.15
Csde1-216ENSMUST00000199571 Rhox8Q6VSS7 320 aa14.04□□□□□ -0.16
Csde1-216ENSMUST00000199571 Dnajc5bQ9CQ94 199 aa14.02□□□□□ -0.17
Csde1-216ENSMUST00000199571 Ehmt2Q9Z148 1263 aaKnown RBP13.89□□□□□ -0.19
Csde1-216ENSMUST00000199571 NacadQ5SWP3 1504 aa13.62□□□□□ -0.23
Csde1-216ENSMUST00000199571 Kdm5dQ62240 1548 aa13.5□□□□□ -0.25
Csde1-216ENSMUST00000199571 Rpgrip1Q9EPQ2 1331 aa13.49□□□□□ -0.25
Csde1-216ENSMUST00000199571 Mapk8ip2Q9ERE9 830 aa13.46□□□□□ -0.26
Csde1-216ENSMUST00000199571 Dnajc5P60904 198 aa13.41□□□□□ -0.26
Csde1-216ENSMUST00000199571 Sycp2Q9CUU3 1500 aa13.38□□□□□ -0.27
Csde1-216ENSMUST00000199571 Acin1Q9JIX8 1338 aaKnown RBP13.36□□□□□ -0.27
Csde1-216ENSMUST00000199571 Pcgf6Q99NA9 353 aa13.35□□□□□ -0.27
Csde1-216ENSMUST00000199571 Chic1Q8CBW7 227 aa13.3□□□□□ -0.28
Csde1-216ENSMUST00000199571 BicraF8VPZ9 1578 aa13.28□□□□□ -0.28
Csde1-216ENSMUST00000199571 Thoc2B1AZI6 1594 aaKnown RBP13.21□□□□□ -0.3
Csde1-216ENSMUST00000199571 Pds5bQ4VA53 1446 aaKnown RBP13.11□□□□□ -0.31
Csde1-216ENSMUST00000199571 Supt5hO55201 1082 aaKnown RBP13.1□□□□□ -0.31
Csde1-216ENSMUST00000199571 Ccdc136Q3TVA9 1136 aa13.01□□□□□ -0.33
Csde1-216ENSMUST00000199571 Ccdc180J3QNE4 1664 aa13□□□□□ -0.33
Csde1-216ENSMUST00000199571 Cc2d2aQ8CFW7 1633 aa12.99□□□□□ -0.33
Csde1-216ENSMUST00000199571 Trim41Q5NCC3 630 aa12.96□□□□□ -0.33
Csde1-216ENSMUST00000199571 Dcaf1Q80TR8 1506 aa12.95□□□□□ -0.34
Csde1-216ENSMUST00000199571 Neurod1Q60867 357 aa12.94□□□□□ -0.34
Csde1-216ENSMUST00000199571 Zeb1Q64318 1117 aa12.92□□□□□ -0.34
Csde1-216ENSMUST00000199571 Rtl1Q7M732 1744 aa12.83□□□□□ -0.36
Csde1-216ENSMUST00000199571 Atad2bE9Q166 1460 aaKnown RBP12.83□□□□□ -0.36
Csde1-216ENSMUST00000199571 Ercc6F8VPZ5 1481 aa12.81□□□□□ -0.36
Csde1-216ENSMUST00000199571 Fam135aQ6NS59 1506 aa12.78□□□□□ -0.36
Csde1-216ENSMUST00000199571 Ppargc1bQ8VHJ7 1014 aa12.66□□□□□ -0.38
Csde1-216ENSMUST00000199571 Zcchc6Q5BLK4 1491 aaKnown RBP12.66□□□□□ -0.38
Csde1-216ENSMUST00000199571 Cngb1E1AZ71 1325 aa12.65□□□□□ -0.38
Csde1-216ENSMUST00000199571 Rb1cc1Q9ESK9 1588 aa12.64□□□□□ -0.39
Csde1-216ENSMUST00000199571 HrcG5E8J6 738 aa12.63□□□□□ -0.39
Csde1-216ENSMUST00000199571 Baz1bQ9Z277 1479 aa12.63□□□□□ -0.39
Csde1-216ENSMUST00000199571 Gab3Q8BSM5 595 aa12.61□□□□□ -0.39
Csde1-216ENSMUST00000199571 Gm38655A0A286YDK6 273 aa12.6□□□□□ -0.39
Csde1-216ENSMUST00000199571 Csrnp3P59055 597 aa12.6□□□□□ -0.39
Csde1-216ENSMUST00000199571 Phldb1Q6PDH0 1371 aaKnown RBP12.59□□□□□ -0.39
Csde1-216ENSMUST00000199571 Smarca2Q6DIC0 1577 aa12.58□□□□□ -0.4
Csde1-216ENSMUST00000199571 1700123L14RikQ3V2K7 440 aa12.57□□□□□ -0.4
Csde1-216ENSMUST00000199571 Sall2Q9QX96 1004 aa12.56□□□□□ -0.4
Csde1-216ENSMUST00000199571 Ubl4bQ9CQ84 188 aa12.55□□□□□ -0.4
Csde1-216ENSMUST00000199571 Mrc2Q64449 1479 aa12.51□□□□□ -0.41
Csde1-216ENSMUST00000199571 Las1lA2BE28 776 aaKnown RBP12.48□□□□□ -0.41
Csde1-216ENSMUST00000199571 Wdr66E9Q743 1299 aa12.47□□□□□ -0.41
Csde1-216ENSMUST00000199571 Iqgap2Q3UQ44 1575 aa12.46□□□□□ -0.41
Csde1-216ENSMUST00000199571 Frmpd1A2AKB4 1549 aa12.46□□□□□ -0.41
Csde1-216ENSMUST00000199571 Wdr62Q3U3T8 1523 aa12.46□□□□□ -0.41
Csde1-216ENSMUST00000199571 Smarca4Q3TKT4 1613 aaKnown RBP12.43□□□□□ -0.42
Csde1-216ENSMUST00000199571 Crybg2B7ZCC2 1516 aa12.42□□□□□ -0.42
Csde1-216ENSMUST00000199571 Mier1Q5UAK0 511 aa12.41□□□□□ -0.42
Csde1-216ENSMUST00000199571 Baz1aO88379 1555 aa12.36□□□□□ -0.43
Csde1-216ENSMUST00000199571 Shroom2A2ALU4 1481 aa12.35□□□□□ -0.43
Csde1-216ENSMUST00000199571 Col17a1Q07563 1470 aa12.33□□□□□ -0.44
Csde1-216ENSMUST00000199571 Aebp2Q9Z248 504 aaKnown RBP12.3□□□□□ -0.44
Csde1-216ENSMUST00000199571 Rsf1E9PWW9 1441 aaKnown RBP12.28□□□□□ -0.44
Csde1-216ENSMUST00000199571 Anks4bQ8K3X6 423 aa12.27□□□□□ -0.44
Csde1-216ENSMUST00000199571 UbtfP25976 765 aaKnown RBP12.25□□□□□ -0.45
Csde1-216ENSMUST00000199571 Lrriq1Q0P5X1 1673 aa12.25□□□□□ -0.45
Csde1-216ENSMUST00000199571 NefmP08553 848 aa12.22□□□□□ -0.45
Csde1-216ENSMUST00000199571 Cecr2E9Q2Z1 1453 aa12.21□□□□□ -0.46
Csde1-216ENSMUST00000199571 CenpbP27790 599 aa12.2□□□□□ -0.46
Csde1-216ENSMUST00000199571 Cdk11bP24788 784 aaKnown RBP12.2□□□□□ -0.46
Csde1-216ENSMUST00000199571 Nop58Q6DFW4 536 aaKnown RBP12.2□□□□□ -0.46
Csde1-216ENSMUST00000199571 Unc13aQ4KUS2 1712 aa12.19□□□□□ -0.46
Csde1-216ENSMUST00000199571 Pabpn1Q8CCS6 302 aaKnown RBP12.17□□□□□ -0.46
Csde1-216ENSMUST00000199571 Pcdh10E9PXQ7 1057 aa12.12□□□□□ -0.47
Csde1-216ENSMUST00000199571 Top2bQ64511 1612 aa12.09□□□□□ -0.47
Csde1-216ENSMUST00000199571 Eif4g3Q80XI3 1579 aaKnown RBP12.07□□□□□ -0.48
Csde1-216ENSMUST00000199571 Cep164Q5DU05 1446 aa12.06□□□□□ -0.48
Csde1-216ENSMUST00000199571 SafbD3YXK2 937 aaKnown RBP12.06□□□□□ -0.48
Csde1-216ENSMUST00000199571 Aplp2Q06335 707 aa12.03□□□□□ -0.48
Csde1-216ENSMUST00000199571 Pelp1Q9DBD5 1123 aaKnown RBP12.02□□□□□ -0.48
Csde1-216ENSMUST00000199571 DiexfQ8BTT6 772 aaKnown RBP12.01□□□□□ -0.49
Csde1-216ENSMUST00000199571 Ap3b1Q9Z1T1 1105 aa12.01□□□□□ -0.49
Csde1-216ENSMUST00000199571 Myt1lP97500 1187 aa12□□□□□ -0.49
Csde1-216ENSMUST00000199571 Zcchc11B2RX14 1644 aaKnown RBP12□□□□□ -0.49
Csde1-216ENSMUST00000199571 Fam71e1A1L3C1 212 aa11.98□□□□□ -0.49
Csde1-216ENSMUST00000199571 Kif21aQ9QXL2 1672 aa11.98□□□□□ -0.49
Csde1-216ENSMUST00000199571 Cux2P70298 1426 aa11.97□□□□□ -0.49
Csde1-216ENSMUST00000199571 ClspnQ80YR7 1315 aa11.94□□□□□ -0.5
Csde1-216ENSMUST00000199571 Arhgef5E9Q7D5 1581 aa11.93□□□□□ -0.5
Csde1-216ENSMUST00000199571 Hnrnpul2Q00PI9 745 aaKnown RBP11.92□□□□□ -0.5
Csde1-216ENSMUST00000199571 Ifnlr1Q8CGK5 535 aa11.91□□□□□ -0.5
Csde1-216ENSMUST00000199571 Bcl11aQ9QYE3 773 aa11.91□□□□□ -0.5
Csde1-216ENSMUST00000199571 Ttbk1Q6PCN3 1308 aa11.89□□□□□ -0.51
Csde1-216ENSMUST00000199571 Esf1Q3V1V3 845 aaKnown RBP11.87□□□□□ -0.51
Csde1-216ENSMUST00000199571 Eid3Q3V124 375 aa11.87□□□□□ -0.51
Csde1-216ENSMUST00000199571 Npm1Q61937 292 aaKnown RBP11.84□□□□□ -0.51
Csde1-216ENSMUST00000199571 TonslQ6NZL6 1363 aa11.84□□□□□ -0.51
Csde1-216ENSMUST00000199571 Plb1Q3TTY0 1478 aa11.84□□□□□ -0.51
Csde1-216ENSMUST00000199571 Ccdc88bQ4QRL3 1481 aa11.84□□□□□ -0.51
Csde1-216ENSMUST00000199571 Kif15Q6P9L6 1387 aa11.83□□□□□ -0.51
Csde1-216ENSMUST00000199571 Urb2E9Q7L1 1524 aaKnown RBP11.82□□□□□ -0.52
Csde1-216ENSMUST00000199571 Myt1Q8CFC2 1127 aa11.82□□□□□ -0.52
Csde1-216ENSMUST00000199571 Plekhg3Q4VAC9 1341 aa11.81□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 60.9 ms