RNA–Protein interactions for RNA: ENSMUST00000145482.7

Prpf40b-212, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,308 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-212ENSMUST00000145482 Gm1043A0A140LJC2 1431 aa22.28■■□□□ 1.16
Prpf40b-212ENSMUST00000145482 Gtf3c3Q3TMP1 882 aa22.28■■□□□ 1.16
Prpf40b-212ENSMUST00000145482 Eif4g3Q80XI3 1579 aaKnown RBP22.28■■□□□ 1.16
Prpf40b-212ENSMUST00000145482 Mrs2Q5NCE8 434 aa22.27■■□□□ 1.16
Prpf40b-212ENSMUST00000145482 Fgd6Q69ZL1 1399 aa22.27■■□□□ 1.16
Prpf40b-212ENSMUST00000145482 Ccnb3Q810T2 1396 aa22.26■■□□□ 1.15
Prpf40b-212ENSMUST00000145482 Abcc2Q8VI47 1543 aa22.26■■□□□ 1.15
Prpf40b-212ENSMUST00000145482 Shroom2A2ALU4 1481 aa22.25■■□□□ 1.15
Prpf40b-212ENSMUST00000145482 DaxxO35613 739 aa22.24■■□□□ 1.15
Prpf40b-212ENSMUST00000145482 Ccdc27Q3V036 639 aa22.24■■□□□ 1.15
Prpf40b-212ENSMUST00000145482 Abca5Q8K448 1642 aa22.24■■□□□ 1.15
Prpf40b-212ENSMUST00000145482 Arhgap31A6X8Z5 1425 aa22.24■■□□□ 1.15
Prpf40b-212ENSMUST00000145482 Pbrm1Q8BSQ9 1634 aaKnown RBP22.21■■□□□ 1.15
Prpf40b-212ENSMUST00000145482 Wwc2Q6NXJ0 1187 aa22.21■■□□□ 1.15
Prpf40b-212ENSMUST00000145482 Gm13697A2AK42 830 aa22.18■■□□□ 1.14
Prpf40b-212ENSMUST00000145482 3425401B19RikD3Z1D3 1412 aa22.16■■□□□ 1.14
Prpf40b-212ENSMUST00000145482 Ncoa3O09000 1398 aa22.16■■□□□ 1.14
Prpf40b-212ENSMUST00000145482 NrdcQ8BHG1 1161 aa22.14■■□□□ 1.14
Prpf40b-212ENSMUST00000145482 Kdm5bQ80Y84 1544 aa22.14■■□□□ 1.13
Prpf40b-212ENSMUST00000145482 Irx3P81067 507 aa22.14■■□□□ 1.13
Prpf40b-212ENSMUST00000145482 BC005561E9Q5E2 1589 aa22.13■■□□□ 1.13
Prpf40b-212ENSMUST00000145482 Hsp90aa1P07901 733 aaKnown RBP22.09■■□□□ 1.13
Prpf40b-212ENSMUST00000145482 Zbtb7cQ8VCZ7 619 aa22.09■■□□□ 1.13
Prpf40b-212ENSMUST00000145482 NexmifQ5DTT1 1515 aa22.08■■□□□ 1.13
Prpf40b-212ENSMUST00000145482 Mug1P28665 1476 aa22.08■■□□□ 1.13
Prpf40b-212ENSMUST00000145482 Cabp1Q9JLK7 227 aa22.08■■□□□ 1.13
Prpf40b-212ENSMUST00000145482 Smg6P61406 1418 aaKnown RBP22.08■■□□□ 1.12
Prpf40b-212ENSMUST00000145482 Pabpn1Q8CCS6 302 aaKnown RBP22.07■■□□□ 1.12
Prpf40b-212ENSMUST00000145482 Pknox2Q8BG99 474 aa22.07■■□□□ 1.12
Prpf40b-212ENSMUST00000145482 Arid3cA6PWV5 409 aa22.06■■□□□ 1.12
Prpf40b-212ENSMUST00000145482 Gm14025A2AP89 1413 aa22.05■■□□□ 1.12
Prpf40b-212ENSMUST00000145482 Ccer2J3QPU5 274 aa22.05■■□□□ 1.12
Prpf40b-212ENSMUST00000145482 Liat1Q810M6 228 aa22.05■■□□□ 1.12
Prpf40b-212ENSMUST00000145482 Kcnh8P59111 1102 aa22.04■■□□□ 1.12
Prpf40b-212ENSMUST00000145482 Fgd1P52734 960 aa22.01■■□□□ 1.11
Prpf40b-212ENSMUST00000145482 Dnmt1P13864 1620 aaKnown RBP22■■□□□ 1.11
Prpf40b-212ENSMUST00000145482 Ccdc141E9Q8Q6 1531 aa21.99■■□□□ 1.11
Prpf40b-212ENSMUST00000145482 Exoc6Q8R313 802 aa21.99■■□□□ 1.11
Prpf40b-212ENSMUST00000145482 Rapgef6Q5NCJ1 1609 aa21.99■■□□□ 1.11
Prpf40b-212ENSMUST00000145482 Map3k4O08648 1597 aa21.97■■□□□ 1.11
Prpf40b-212ENSMUST00000145482 Abcc1O35379 1528 aa21.97■■□□□ 1.11
Prpf40b-212ENSMUST00000145482 Tdrd9Q14BI7 1383 aa21.96■■□□□ 1.11
Prpf40b-212ENSMUST00000145482 A2mQ6GQT1 1474 aa21.96■■□□□ 1.11
Prpf40b-212ENSMUST00000145482 Peg3Q3URU2 1571 aa21.96■■□□□ 1.11
Prpf40b-212ENSMUST00000145482 Arhgef12Q8R4H2 1543 aaKnown RBP21.96■■□□□ 1.11
Prpf40b-212ENSMUST00000145482 ChgaP26339 463 aaKnown RBP21.96■■□□□ 1.11
Prpf40b-212ENSMUST00000145482 Slc4a2P13808 1237 aaKnown RBP21.95■■□□□ 1.1
Prpf40b-212ENSMUST00000145482 Washc2Q6PGL7 1334 aa21.95■■□□□ 1.1
Prpf40b-212ENSMUST00000145482 Magi1Q6RHR9 1471 aa21.95■■□□□ 1.1
Prpf40b-212ENSMUST00000145482 Egfem1Q8C088 590 aa21.94■■□□□ 1.1
Prpf40b-212ENSMUST00000145482 Ythdc2B2RR83 1445 aaKnown RBP21.92■■□□□ 1.1
Prpf40b-212ENSMUST00000145482 Zbtb4Q5F293 982 aa21.92■■□□□ 1.1
Prpf40b-212ENSMUST00000145482 Ncoa2Q61026 1462 aa21.92■■□□□ 1.1
Prpf40b-212ENSMUST00000145482 Prex2Q3LAC4 1598 aa21.91■■□□□ 1.1
Prpf40b-212ENSMUST00000145482 Zfp644E9QA22 1323 aa21.9■■□□□ 1.1
Prpf40b-212ENSMUST00000145482 Fam163aQ8CAA5 168 aa21.9■■□□□ 1.1
Prpf40b-212ENSMUST00000145482 Arhgef40Q3UPH7 1517 aa21.88■■□□□ 1.09
Prpf40b-212ENSMUST00000145482 Arhgef11Q68FM7 1552 aa21.87■■□□□ 1.09
Prpf40b-212ENSMUST00000145482 Lmtk2Q3TYD6 1471 aa21.87■■□□□ 1.09
Prpf40b-212ENSMUST00000145482 Ipo9Q91YE6 1041 aa21.86■■□□□ 1.09
Prpf40b-212ENSMUST00000145482 Mtus2Q3UHD3 1353 aa21.86■■□□□ 1.09
Prpf40b-212ENSMUST00000145482 Naip2Q9QUK4 1447 aa21.85■■□□□ 1.09
Prpf40b-212ENSMUST00000145482 Mroh2aD3Z750 1679 aa21.85■■□□□ 1.09
Prpf40b-212ENSMUST00000145482 Dhx57Q6P5D3 1388 aaKnown RBP21.84■■□□□ 1.09
Prpf40b-212ENSMUST00000145482 Ofd1Q80Z25 1017 aa21.83■■□□□ 1.09
Prpf40b-212ENSMUST00000145482 UacaQ8CGB3 1411 aa21.83■■□□□ 1.09
Prpf40b-212ENSMUST00000145482 Zcchc11B2RX14 1644 aaKnown RBP21.83■■□□□ 1.08
Prpf40b-212ENSMUST00000145482 Abcc5Q9R1X5 1436 aa21.82■■□□□ 1.08
Prpf40b-212ENSMUST00000145482 Mia2Q91ZV0 1396 aa21.81■■□□□ 1.08
Prpf40b-212ENSMUST00000145482 Rrp7aQ9D1C9 280 aaKnown RBP21.79■■□□□ 1.08
Prpf40b-212ENSMUST00000145482 Plekhh2Q8C115 1491 aa21.78■■□□□ 1.08
Prpf40b-212ENSMUST00000145482 Znf608Q56A10 1511 aa21.77■■□□□ 1.08
Prpf40b-212ENSMUST00000145482 Gapvd1Q6PAR5 1458 aa21.76■■□□□ 1.07
Prpf40b-212ENSMUST00000145482 PtprtQ99M80 1454 aa21.76■■□□□ 1.07
Prpf40b-212ENSMUST00000145482 Znf692Q3U381 531 aa21.75■■□□□ 1.07
Prpf40b-212ENSMUST00000145482 Sart1Q9Z315 806 aaKnown RBP21.75■■□□□ 1.07
Prpf40b-212ENSMUST00000145482 Kdm6bQ5NCY0 1641 aa21.75■■□□□ 1.07
Prpf40b-212ENSMUST00000145482 Fancd2Q80V62 1450 aa21.75■■□□□ 1.07
Prpf40b-212ENSMUST00000145482 Taok2Q6ZQ29 1240 aa21.75■■□□□ 1.07
Prpf40b-212ENSMUST00000145482 Gm156Q58A37 223 aa21.74■■□□□ 1.07
Prpf40b-212ENSMUST00000145482 Ccdc9Q8VC31 543 aaKnown RBP21.74■■□□□ 1.07
Prpf40b-212ENSMUST00000145482 Adcy10Q8C0T9 1614 aa21.73■■□□□ 1.07
Prpf40b-212ENSMUST00000145482 Fhad1A6PWD2 1420 aa21.73■■□□□ 1.07
Prpf40b-212ENSMUST00000145482 Rad21Q61550 635 aaKnown RBP21.72■■□□□ 1.07
Prpf40b-212ENSMUST00000145482 Kiaa1551Q5DTW7 1521 aa21.72■■□□□ 1.07
Prpf40b-212ENSMUST00000145482 ArxO35085 564 aa21.71■■□□□ 1.07
Prpf40b-212ENSMUST00000145482 Atp10dQ8K2X1 1416 aa21.71■■□□□ 1.07
Prpf40b-212ENSMUST00000145482 Rtn4Q99P72 1162 aaKnown RBP21.7■■□□□ 1.06
Prpf40b-212ENSMUST00000145482 Mphosph9A6H5Y1 991 aa21.7■■□□□ 1.06
Prpf40b-212ENSMUST00000145482 Iqcf3Q9D498 203 aa21.7■■□□□ 1.06
Prpf40b-212ENSMUST00000145482 Cdc42bpaQ3UU96 1719 aa21.69■■□□□ 1.06
Prpf40b-212ENSMUST00000145482 Mapkbp1Q6NS57 1503 aa21.69■■□□□ 1.06
Prpf40b-212ENSMUST00000145482 Chd1P40201 1711 aa21.68■■□□□ 1.06
Prpf40b-212ENSMUST00000145482 Tcerg1Q8CGF7 1100 aaKnown RBP21.68■■□□□ 1.06
Prpf40b-212ENSMUST00000145482 Trappc8E9PWG2 1437 aa21.68■■□□□ 1.06
Prpf40b-212ENSMUST00000145482 Vps8Q0P5W1 1427 aa21.67■■□□□ 1.06
Prpf40b-212ENSMUST00000145482 Arhgap5P97393 1501 aa21.67■■□□□ 1.06
Prpf40b-212ENSMUST00000145482 Rgl3Q3UYI5 709 aa21.67■■□□□ 1.06
Prpf40b-212ENSMUST00000145482 Rrbp1Q99PL5 1605 aaKnown RBP21.65■■□□□ 1.06
Prpf40b-212ENSMUST00000145482 Ankrd36D3Z4K0 1415 aa21.65■■□□□ 1.06
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms