RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Gtf2e1Q9D0D5 440 aa23.71■■□□□ 1.39
Sort1-203ENSMUST00000135636 NudcO35685 332 aaKnown RBP23.7■■□□□ 1.38
Sort1-203ENSMUST00000135636 Vps53Q8CCB4 832 aa23.69■■□□□ 1.38
Sort1-203ENSMUST00000135636 Tmco5bQ80X59 307 aa23.69■■□□□ 1.38
Sort1-203ENSMUST00000135636 Trim44Q9QXA7 346 aa23.68■■□□□ 1.38
Sort1-203ENSMUST00000135636 Mical1Q8VDP3 1048 aa23.68■■□□□ 1.38
Sort1-203ENSMUST00000135636 Ap3b2Q9JME5 1082 aa23.64■■□□□ 1.38
Sort1-203ENSMUST00000135636 Rundc1Q0VDN7 615 aa23.63■■□□□ 1.37
Sort1-203ENSMUST00000135636 Golga3P55937 1487 aa23.62■■□□□ 1.37
Sort1-203ENSMUST00000135636 Pabpn1Q8CCS6 302 aaKnown RBP23.6■■□□□ 1.37
Sort1-203ENSMUST00000135636 U2af1Q9D883 239 aaKnown RBP23.6■■□□□ 1.37
Sort1-203ENSMUST00000135636 Prm3Q62100 101 aa23.59■■□□□ 1.37
Sort1-203ENSMUST00000135636 Trak1Q6PD31 939 aa23.59■■□□□ 1.37
Sort1-203ENSMUST00000135636 Aebp2Q9Z248 504 aaKnown RBP23.58■■□□□ 1.36
Sort1-203ENSMUST00000135636 Tcerg1Q8CGF7 1100 aaKnown RBP23.57■■□□□ 1.36
Sort1-203ENSMUST00000135636 Dcaf11Q91VU6 549 aa23.57■■□□□ 1.36
Sort1-203ENSMUST00000135636 Hspa5P20029 655 aaKnown RBP23.56■■□□□ 1.36
Sort1-203ENSMUST00000135636 Pcmtd1P59913 357 aa23.56■■□□□ 1.36
Sort1-203ENSMUST00000135636 Speer4f1Q9D5Q6 258 aa23.55■■□□□ 1.36
Sort1-203ENSMUST00000135636 Klf15Q9EPW2 415 aa23.55■■□□□ 1.36
Sort1-203ENSMUST00000135636 Fbln2P37889 1221 aa23.55■■□□□ 1.36
Sort1-203ENSMUST00000135636 Ppm1gQ61074 542 aa23.54■■□□□ 1.36
Sort1-203ENSMUST00000135636 Baz1aO88379 1555 aa23.52■■□□□ 1.36
Sort1-203ENSMUST00000135636 Cwc22Q8C5N3 908 aaKnown RBP23.52■■□□□ 1.36
Sort1-203ENSMUST00000135636 Sugp2Q8CH09 1067 aa23.51■■□□□ 1.35
Sort1-203ENSMUST00000135636 Slc4a1apE9PX68 744 aa23.51■■□□□ 1.35
Sort1-203ENSMUST00000135636 Cabp4Q8VHC5 271 aa23.51■■□□□ 1.35
Sort1-203ENSMUST00000135636 Shroom4Q1W617 1475 aa23.51■■□□□ 1.35
Sort1-203ENSMUST00000135636 Wwc2Q6NXJ0 1187 aa23.5■■□□□ 1.35
Sort1-203ENSMUST00000135636 Noc3lQ8VI84 807 aaKnown RBP23.49■■□□□ 1.35
Sort1-203ENSMUST00000135636 Zfp777B9EKF4 885 aa23.49■■□□□ 1.35
Sort1-203ENSMUST00000135636 Utp14aQ640M1 767 aaKnown RBP23.48■■□□□ 1.35
Sort1-203ENSMUST00000135636 Slc4a3P16283 1227 aa23.48■■□□□ 1.35
Sort1-203ENSMUST00000135636 Fan1Q69ZT1 1020 aa23.48■■□□□ 1.35
Sort1-203ENSMUST00000135636 Pkd2O35245 966 aa23.47■■□□□ 1.35
Sort1-203ENSMUST00000135636 Brpf1B2RRD7 1212 aa23.47■■□□□ 1.35
Sort1-203ENSMUST00000135636 Aebp1Q640N1 1128 aa23.47■■□□□ 1.35
Sort1-203ENSMUST00000135636 Spag9Q58A65 1321 aaKnown RBP23.47■■□□□ 1.35
Sort1-203ENSMUST00000135636 Map7O88735 730 aa23.47■■□□□ 1.35
Sort1-203ENSMUST00000135636 MecomP14404 1042 aa23.47■■□□□ 1.35
Sort1-203ENSMUST00000135636 Fhad1A6PWD2 1420 aa23.46■■□□□ 1.35
Sort1-203ENSMUST00000135636 Sf3b2Q3UJB0 878 aaKnown RBP23.45■■□□□ 1.35
Sort1-203ENSMUST00000135636 Kdm5dQ62240 1548 aa23.45■■□□□ 1.35
Sort1-203ENSMUST00000135636 Cluap1Q8R3P7 413 aa23.45■■□□□ 1.34
Sort1-203ENSMUST00000135636 Pds5bQ4VA53 1446 aaKnown RBP23.45■■□□□ 1.34
Sort1-203ENSMUST00000135636 Casc1Q6TDU8 730 aa23.45■■□□□ 1.34
Sort1-203ENSMUST00000135636 Cabp1Q9JLK7 227 aa23.44■■□□□ 1.34
Sort1-203ENSMUST00000135636 MccE9PWI3 1003 aa23.44■■□□□ 1.34
Sort1-203ENSMUST00000135636 Ccar1Q8CH18 1146 aaKnown RBP23.43■■□□□ 1.34
Sort1-203ENSMUST00000135636 Baz1bQ9Z277 1479 aa23.42■■□□□ 1.34
Sort1-203ENSMUST00000135636 Iffo2Q8R2V2 512 aa23.41■■□□□ 1.34
Sort1-203ENSMUST00000135636 AppP12023 770 aa23.4■■□□□ 1.34
Sort1-203ENSMUST00000135636 Sytl4Q9R0Q1 673 aa23.4■■□□□ 1.34
Sort1-203ENSMUST00000135636 CgnP59242 1191 aa23.4■■□□□ 1.34
Sort1-203ENSMUST00000135636 Shq1Q7TMX5 569 aa23.4■■□□□ 1.34
Sort1-203ENSMUST00000135636 Slc4a10Q5DTL9 1118 aa23.39■■□□□ 1.34
Sort1-203ENSMUST00000135636 Chmp4bQ9D8B3 224 aaKnown RBP23.39■■□□□ 1.34
Sort1-203ENSMUST00000135636 Tmf1B9EKI3 1091 aa23.39■■□□□ 1.34
Sort1-203ENSMUST00000135636 Sart3Q9JLI8 962 aaKnown RBP23.39■■□□□ 1.34
Sort1-203ENSMUST00000135636 Paf1Q8K2T8 535 aa23.38■■□□□ 1.33
Sort1-203ENSMUST00000135636 Ncbp3Q8BZR9 615 aaKnown RBP23.37■■□□□ 1.33
Sort1-203ENSMUST00000135636 Dhx16G3X8X0 1044 aaKnown RBP23.36■■□□□ 1.33
Sort1-203ENSMUST00000135636 Cux2P70298 1426 aa23.36■■□□□ 1.33
Sort1-203ENSMUST00000135636 Sin3aQ60520 1274 aaKnown RBP23.34■■□□□ 1.33
Sort1-203ENSMUST00000135636 Ddx54Q8K4L0 874 aaKnown RBP23.34■■□□□ 1.33
Sort1-203ENSMUST00000135636 Cyb5rlB1AS42 316 aa23.33■■□□□ 1.32
Sort1-203ENSMUST00000135636 Kcnn1Q9EQR3 537 aa23.33■■□□□ 1.32
Sort1-203ENSMUST00000135636 Mink1Q9JM52 1308 aa23.32■■□□□ 1.32
Sort1-203ENSMUST00000135636 Evi5lH3BKQ3 813 aa23.32■■□□□ 1.32
Sort1-203ENSMUST00000135636 BcanQ61361 883 aa23.32■■□□□ 1.32
Sort1-203ENSMUST00000135636 CrebrfQ8CDG5 640 aaKnown RBP23.32■■□□□ 1.32
Sort1-203ENSMUST00000135636 Rock2P70336 1388 aa23.31■■□□□ 1.32
Sort1-203ENSMUST00000135636 Gm21190A0A0G2JGJ6 266 aa23.31■■□□□ 1.32
Sort1-203ENSMUST00000135636 Atf3Q60765 181 aa23.31■■□□□ 1.32
Sort1-203ENSMUST00000135636 Fyb1O35601 819 aa23.3■■□□□ 1.32
Sort1-203ENSMUST00000135636 Dnai2A2AC93 623 aa23.3■■□□□ 1.32
Sort1-203ENSMUST00000135636 Anks4bQ8K3X6 423 aa23.3■■□□□ 1.32
Sort1-203ENSMUST00000135636 Nup155Q99P88 1391 aaKnown RBP23.29■■□□□ 1.32
Sort1-203ENSMUST00000135636 MycnP03966 462 aaKnown RBP23.29■■□□□ 1.32
Sort1-203ENSMUST00000135636 HnrnpuQ8VEK3 800 aaKnown RBP23.29■■□□□ 1.32
Sort1-203ENSMUST00000135636 CrbnQ8C7D2 445 aa23.28■■□□□ 1.32
Sort1-203ENSMUST00000135636 Golga2Q921M4 999 aa23.28■■□□□ 1.32
Sort1-203ENSMUST00000135636 Eva1cP58659 440 aa23.27■■□□□ 1.32
Sort1-203ENSMUST00000135636 Sart1Q9Z315 806 aaKnown RBP23.27■■□□□ 1.32
Sort1-203ENSMUST00000135636 Rwdd1Q9CQK7 243 aa23.27■■□□□ 1.32
Sort1-203ENSMUST00000135636 KnstrnQ9D9Z1 312 aaKnown RBP23.27■■□□□ 1.32
Sort1-203ENSMUST00000135636 Sirt1Q923E4 737 aa23.27■■□□□ 1.32
Sort1-203ENSMUST00000135636 Ripply1Q2WG77 201 aa23.27■■□□□ 1.32
Sort1-203ENSMUST00000135636 Cc2d1aQ8K1A6 943 aa23.26■■□□□ 1.31
Sort1-203ENSMUST00000135636 ArsiQ32KI9 573 aa23.26■■□□□ 1.31
Sort1-203ENSMUST00000135636 Mphosph9A6H5Y1 991 aa23.23■■□□□ 1.31
Sort1-203ENSMUST00000135636 Bcl2l13P59017 434 aa23.22■■□□□ 1.31
Sort1-203ENSMUST00000135636 GorabQ8BRM2 368 aa23.22■■□□□ 1.31
Sort1-203ENSMUST00000135636 Mia2Q91ZV0 1396 aa23.22■■□□□ 1.31
Sort1-203ENSMUST00000135636 Ksr2Q3UVC0 959 aa23.22■■□□□ 1.31
Sort1-203ENSMUST00000135636 CenpjQ569L8 1344 aa23.21■■□□□ 1.31
Sort1-203ENSMUST00000135636 Zpr1Q62384 459 aa23.21■■□□□ 1.31
Sort1-203ENSMUST00000135636 Kri1Q8VDQ9 704 aaKnown RBP23.19■■□□□ 1.3
Sort1-203ENSMUST00000135636 Rbm5Q91YE7 815 aaKnown RBP23.18■■□□□ 1.3
Sort1-203ENSMUST00000135636 Chmp7Q8R1T1 451 aa23.17■■□□□ 1.3
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms