RNA–Protein interactions for RNA: ENSMUST00000111454.3

Ccr9-201, Transcript of C-C chemokine receptor type 9, mousemouse

TSL 5 BASIC

Gene Ccr9, Length 2,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9-201ENSMUST00000111454 Arhgap27A2AB59 869 aa9.52□□□□□ -0.88
Ccr9-201ENSMUST00000111454 Pknox2Q8BG99 474 aa9.52□□□□□ -0.88
Ccr9-201ENSMUST00000111454 AknaQ80VW7 1404 aa9.52□□□□□ -0.89
Ccr9-201ENSMUST00000111454 Carmil1Q6EDY6 1374 aa9.52□□□□□ -0.89
Ccr9-201ENSMUST00000111454 EprsQ8CGC7 1512 aaKnown RBP9.51□□□□□ -0.89
Ccr9-201ENSMUST00000111454 Vsig10D3YX43 558 aa9.51□□□□□ -0.89
Ccr9-201ENSMUST00000111454 G430095P16RikE9Q913 147 aa9.51□□□□□ -0.89
Ccr9-201ENSMUST00000111454 Map3k1P53349 1493 aa9.5□□□□□ -0.89
Ccr9-201ENSMUST00000111454 WizO88286 1684 aaKnown RBP9.49□□□□□ -0.89
Ccr9-201ENSMUST00000111454 Gpatch8A2A6A1 1505 aa9.49□□□□□ -0.89
Ccr9-201ENSMUST00000111454 Clip1Q922J3 1391 aa9.49□□□□□ -0.89
Ccr9-201ENSMUST00000111454 PxdnQ3UQ28 1475 aa9.49□□□□□ -0.89
Ccr9-201ENSMUST00000111454 Wdr66E9Q743 1299 aa9.48□□□□□ -0.89
Ccr9-201ENSMUST00000111454 Anp32aO35381 247 aa9.48□□□□□ -0.89
Ccr9-201ENSMUST00000111454 Col17a1Q07563 1470 aa9.48□□□□□ -0.89
Ccr9-201ENSMUST00000111454 TchhA0A0B4J1F9 1599 aa9.48□□□□□ -0.89
Ccr9-201ENSMUST00000111454 Rpap1Q80TE0 1409 aa9.47□□□□□ -0.89
Ccr9-201ENSMUST00000111454 Gtpbp6Q3U6U5 514 aa9.47□□□□□ -0.89
Ccr9-201ENSMUST00000111454 Eif4g1Q6NZJ6 1600 aaKnown RBP9.47□□□□□ -0.89
Ccr9-201ENSMUST00000111454 Adamts12Q811B3 1600 aa9.47□□□□□ -0.89
Ccr9-201ENSMUST00000111454 WdpcpQ8C456 722 aa9.46□□□□□ -0.89
Ccr9-201ENSMUST00000111454 Abca16E9PWJ7 1678 aa9.46□□□□□ -0.89
Ccr9-201ENSMUST00000111454 CadpsQ80TJ1 1355 aa9.46□□□□□ -0.9
Ccr9-201ENSMUST00000111454 Ppp4r2Q0VGB7 417 aa9.46□□□□□ -0.9
Ccr9-201ENSMUST00000111454 Abcc2Q8VI47 1543 aa9.45□□□□□ -0.9
Ccr9-201ENSMUST00000111454 Gm7298A0A0N4SVU1 1476 aa9.44□□□□□ -0.9
Ccr9-201ENSMUST00000111454 Neo1P97798 1493 aa9.44□□□□□ -0.9
Ccr9-201ENSMUST00000111454 Abcc1O35379 1528 aa9.44□□□□□ -0.9
Ccr9-201ENSMUST00000111454 Plekhg3Q4VAC9 1341 aa9.44□□□□□ -0.9
Ccr9-201ENSMUST00000111454 Soga1E1U8D0 1418 aa9.43□□□□□ -0.9
Ccr9-201ENSMUST00000111454 Dnmt1P13864 1620 aaKnown RBP9.43□□□□□ -0.9
Ccr9-201ENSMUST00000111454 Cdca7Q9D0M2 382 aa9.43□□□□□ -0.9
Ccr9-201ENSMUST00000111454 Gapvd1Q6PAR5 1458 aa9.43□□□□□ -0.9
Ccr9-201ENSMUST00000111454 Polr1aO35134 1717 aaKnown RBP9.42□□□□□ -0.9
Ccr9-201ENSMUST00000111454 Cux1P53564 1515 aa9.42□□□□□ -0.9
Ccr9-201ENSMUST00000111454 Zbtb12Q9Z150 459 aa9.41□□□□□ -0.9
Ccr9-201ENSMUST00000111454 Aebp2Q9Z248 504 aaKnown RBP9.41□□□□□ -0.9
Ccr9-201ENSMUST00000111454 Map3k4O08648 1597 aa9.41□□□□□ -0.9
Ccr9-201ENSMUST00000111454 Ythdc2B2RR83 1445 aaKnown RBP9.4□□□□□ -0.9
Ccr9-201ENSMUST00000111454 Ccdc9Q8VC31 543 aaKnown RBP9.4□□□□□ -0.9
Ccr9-201ENSMUST00000111454 BC005561E9Q5E2 1589 aa9.4□□□□□ -0.9
Ccr9-201ENSMUST00000111454 Gm14025A2AP89 1413 aa9.4□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Gm156Q58A37 223 aa9.39□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Ecm2Q5FW85 670 aa9.39□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Fyco1Q8VDC1 1437 aa9.39□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Zcchc11B2RX14 1644 aaKnown RBP9.39□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Cep170Q6A065 1588 aa9.39□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Q8BT18 775 aa9.39□□□□□ -0.91
Ccr9-201ENSMUST00000111454 WrnO09053 1401 aa9.39□□□□□ -0.91
Ccr9-201ENSMUST00000111454 SafbD3YXK2 937 aaKnown RBP9.38□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Fkbp15Q6P9Q6 1216 aaKnown RBP9.38□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Jph4Q80WT0 628 aa9.38□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Slx4Q6P1D7 1565 aa9.38□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Adgrl3Q80TS3 1537 aa9.37□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Chd1P40201 1711 aa9.37□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Hnrnpul2Q00PI9 745 aaKnown RBP9.37□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Gtf3c3Q3TMP1 882 aa9.37□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Ap3b1Q9Z1T1 1105 aa9.36□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Eea1Q8BL66 1411 aa9.36□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Abca5Q8K448 1642 aa9.36□□□□□ -0.91
Ccr9-201ENSMUST00000111454 PtprtQ99M80 1454 aa9.36□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Setd5Q5XJV7 1441 aa9.36□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Ankrd26Q811D2 1581 aa9.34□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Arap1Q4LDD4 1452 aa9.34□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Aebp1Q640N1 1128 aa9.34□□□□□ -0.91
Ccr9-201ENSMUST00000111454 Arhgef12Q8R4H2 1543 aaKnown RBP9.33□□□□□ -0.92
Ccr9-201ENSMUST00000111454 A030005L19RikA0A1Y7VIU2 113 aa9.33□□□□□ -0.92
Ccr9-201ENSMUST00000111454 Upf2A2AT37 1269 aaKnown RBP9.32□□□□□ -0.92
Ccr9-201ENSMUST00000111454 Dmrt2Q8BG36 561 aa9.32□□□□□ -0.92
Ccr9-201ENSMUST00000111454 Pde4cQ3UEI1 686 aa9.29□□□□□ -0.92
Ccr9-201ENSMUST00000111454 Arhgap31A6X8Z5 1425 aa9.29□□□□□ -0.92
Ccr9-201ENSMUST00000111454 Irx3P81067 507 aa9.29□□□□□ -0.92
Ccr9-201ENSMUST00000111454 Ncapd3Q6ZQK0 1506 aa9.28□□□□□ -0.92
Ccr9-201ENSMUST00000111454 Arhgef5E9Q7D5 1581 aa9.28□□□□□ -0.92
Ccr9-201ENSMUST00000111454 Kif27Q7M6Z4 1394 aa9.28□□□□□ -0.92
Ccr9-201ENSMUST00000111454 AI481877A2ALV5 1481 aa9.27□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Tshz2Q68FE9 1030 aa9.27□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Plcd4Q8K3R3 807 aa9.27□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Ncbp3Q8BZR9 615 aaKnown RBP9.26□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Erich3F6QRE9 1637 aa9.26□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Rrbp1Q99PL5 1605 aaKnown RBP9.26□□□□□ -0.93
Ccr9-201ENSMUST00000111454 BlmO88700 1416 aa9.26□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Arid3cA6PWV5 409 aa9.25□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Ccdc141E9Q8Q6 1531 aa9.25□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Pcf11G3X9Z4 1553 aa9.25□□□□□ -0.93
Ccr9-201ENSMUST00000111454 TonslQ6NZL6 1363 aa9.25□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Ppp1r18Q8BQ30 594 aa9.24□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Ipo4Q8VI75 1082 aa9.24□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Lmo7E9PYF4 1699 aaKnown RBP9.24□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Kdm5bQ80Y84 1544 aa9.24□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Ccdc27Q3V036 639 aa9.24□□□□□ -0.93
Ccr9-201ENSMUST00000111454 AcrbpQ3V140 540 aa9.24□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Igf1rQ60751 1373 aa9.24□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Pprc1Q6NZN1 1644 aa9.23□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Lmod2Q3UHZ5 550 aa9.23□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Setbp1Q9Z180 1582 aa9.23□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Supt16hQ920B9 1047 aa9.22□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Rapgef6Q5NCJ1 1609 aa9.22□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Naip1Q9QWK5 1403 aa9.22□□□□□ -0.93
Ccr9-201ENSMUST00000111454 Tiam1Q60610 1591 aa9.22□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms