RNA–Protein interactions for RNA: ENSMUST00000109927.1

Syne3-203, Transcript of Nesprin-3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Syne3, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3-203ENSMUST00000109927 Irx6Q9ER75 438 aa16.45■□□□□ 0.22
Syne3-203ENSMUST00000109927 Aplp2Q06335 707 aa16.45■□□□□ 0.22
Syne3-203ENSMUST00000109927 Gtf2e1Q9D0D5 440 aa16.45■□□□□ 0.22
Syne3-203ENSMUST00000109927 Ifit1bl1D3Z6F0 470 aa16.45■□□□□ 0.22
Syne3-203ENSMUST00000109927 Fgd1P52734 960 aa16.45■□□□□ 0.22
Syne3-203ENSMUST00000109927 Iqcf3Q9D498 203 aa16.44■□□□□ 0.22
Syne3-203ENSMUST00000109927 ArxO35085 564 aa16.44■□□□□ 0.22
Syne3-203ENSMUST00000109927 Spag9Q58A65 1321 aaKnown RBP16.43■□□□□ 0.22
Syne3-203ENSMUST00000109927 NrkQ9R0G8 1455 aa16.42■□□□□ 0.22
Syne3-203ENSMUST00000109927 Calr4Q3TQS0 420 aa16.41■□□□□ 0.22
Syne3-203ENSMUST00000109927 Cnga1P29974 684 aa16.41■□□□□ 0.22
Syne3-203ENSMUST00000109927 Mphosph9A6H5Y1 991 aa16.4■□□□□ 0.22
Syne3-203ENSMUST00000109927 Mapk8ip3Q9ESN9 1337 aa16.4■□□□□ 0.22
Syne3-203ENSMUST00000109927 Grin2bQ01097 1482 aa16.4■□□□□ 0.22
Syne3-203ENSMUST00000109927 Tdrd9Q14BI7 1383 aa16.39■□□□□ 0.21
Syne3-203ENSMUST00000109927 Sox12Q04890 314 aa16.39■□□□□ 0.21
Syne3-203ENSMUST00000109927 Top2aQ01320 1528 aaKnown RBP16.38■□□□□ 0.21
Syne3-203ENSMUST00000109927 UacaQ8CGB3 1411 aa16.35■□□□□ 0.21
Syne3-203ENSMUST00000109927 Ppp4r2Q0VGB7 417 aa16.35■□□□□ 0.21
Syne3-203ENSMUST00000109927 Arhgap31A6X8Z5 1425 aa16.35■□□□□ 0.21
Syne3-203ENSMUST00000109927 Bcl11bQ99PV8 884 aa16.34■□□□□ 0.21
Syne3-203ENSMUST00000109927 Crocc2F6XLV1 1638 aa16.33■□□□□ 0.21
Syne3-203ENSMUST00000109927 Utp14aQ640M1 767 aaKnown RBP16.33■□□□□ 0.21
Syne3-203ENSMUST00000109927 Gm7298A0A0N4SVU1 1476 aa16.33■□□□□ 0.2
Syne3-203ENSMUST00000109927 Hspa5P20029 655 aaKnown RBP16.32■□□□□ 0.2
Syne3-203ENSMUST00000109927 Ap3b2Q9JME5 1082 aa16.32■□□□□ 0.2
Syne3-203ENSMUST00000109927 Cyb5rlB1AS42 316 aa16.32■□□□□ 0.2
Syne3-203ENSMUST00000109927 Pip4k2bQ80XI4 416 aa16.31■□□□□ 0.2
Syne3-203ENSMUST00000109927 Prdm16A2A935 1275 aa16.31■□□□□ 0.2
Syne3-203ENSMUST00000109927 Fhad1A6PWD2 1420 aa16.31■□□□□ 0.2
Syne3-203ENSMUST00000109927 Rundc1Q0VDN7 615 aa16.3■□□□□ 0.2
Syne3-203ENSMUST00000109927 Stard8Q8K031 1019 aa16.3■□□□□ 0.2
Syne3-203ENSMUST00000109927 Trim26Q99PN3 545 aa16.29■□□□□ 0.2
Syne3-203ENSMUST00000109927 Chmp4bQ9D8B3 224 aaKnown RBP16.29■□□□□ 0.2
Syne3-203ENSMUST00000109927 Ofd1Q80Z25 1017 aa16.28■□□□□ 0.2
Syne3-203ENSMUST00000109927 Igf1rQ60751 1373 aa16.28■□□□□ 0.2
Syne3-203ENSMUST00000109927 NudcO35685 332 aaKnown RBP16.28■□□□□ 0.2
Syne3-203ENSMUST00000109927 Znf316Q6PGE4 1016 aa16.26■□□□□ 0.19
Syne3-203ENSMUST00000109927 Aebp2Q9Z248 504 aaKnown RBP16.26■□□□□ 0.19
Syne3-203ENSMUST00000109927 Ccdc141E9Q8Q6 1531 aa16.25■□□□□ 0.19
Syne3-203ENSMUST00000109927 Arhgap5P97393 1501 aa16.25■□□□□ 0.19
Syne3-203ENSMUST00000109927 Wdr43Q6ZQL4 677 aaKnown RBP16.25■□□□□ 0.19
Syne3-203ENSMUST00000109927 Shq1Q7TMX5 569 aa16.24■□□□□ 0.19
Syne3-203ENSMUST00000109927 CenpjQ569L8 1344 aa16.24■□□□□ 0.19
Syne3-203ENSMUST00000109927 Fan1Q69ZT1 1020 aa16.24■□□□□ 0.19
Syne3-203ENSMUST00000109927 Srcin1Q9QWI6 1250 aa16.24■□□□□ 0.19
Syne3-203ENSMUST00000109927 Cux1P53564 1515 aa16.23■□□□□ 0.19
Syne3-203ENSMUST00000109927 EprsQ8CGC7 1512 aaKnown RBP16.22■□□□□ 0.19
Syne3-203ENSMUST00000109927 Nsd2Q8BVE8 1365 aa16.22■□□□□ 0.19
Syne3-203ENSMUST00000109927 Camsap1A2AHC3 1581 aa16.21■□□□□ 0.19
Syne3-203ENSMUST00000109927 Lamc3Q9R0B6 1581 aa16.21■□□□□ 0.19
Syne3-203ENSMUST00000109927 PtprkP35822 1457 aa16.21■□□□□ 0.19
Syne3-203ENSMUST00000109927 Eif4g2Q62448 906 aaKnown RBP16.21■□□□□ 0.18
Syne3-203ENSMUST00000109927 Rtf1A2AQ19 715 aaKnown RBP16.19■□□□□ 0.18
Syne3-203ENSMUST00000109927 Tmf1B9EKI3 1091 aa16.19■□□□□ 0.18
Syne3-203ENSMUST00000109927 Birc3O08863 600 aa16.19■□□□□ 0.18
Syne3-203ENSMUST00000109927 Fam163aQ8CAA5 168 aa16.19■□□□□ 0.18
Syne3-203ENSMUST00000109927 Rock2P70336 1388 aa16.19■□□□□ 0.18
Syne3-203ENSMUST00000109927 Q8BT18 775 aa16.18■□□□□ 0.18
Syne3-203ENSMUST00000109927 ErbinQ80TH2 1402 aa16.18■□□□□ 0.18
Syne3-203ENSMUST00000109927 Map3k1P53349 1493 aa16.17■□□□□ 0.18
Syne3-203ENSMUST00000109927 Mroh2bQ7M6Y6 1581 aa16.17■□□□□ 0.18
Syne3-203ENSMUST00000109927 TchhA0A0B4J1F9 1599 aa16.17■□□□□ 0.18
Syne3-203ENSMUST00000109927 Neo1P97798 1493 aa16.17■□□□□ 0.18
Syne3-203ENSMUST00000109927 Atf3Q60765 181 aa16.16■□□□□ 0.18
Syne3-203ENSMUST00000109927 Rtn4Q99P72 1162 aaKnown RBP16.16■□□□□ 0.18
Syne3-203ENSMUST00000109927 Ecm2Q5FW85 670 aa16.16■□□□□ 0.18
Syne3-203ENSMUST00000109927 1700019A02RikA0A087WPV9 146 aa16.15■□□□□ 0.18
Syne3-203ENSMUST00000109927 Pde4cQ3UEI1 686 aa16.14■□□□□ 0.17
Syne3-203ENSMUST00000109927 Map3k5O35099 1380 aa16.13■□□□□ 0.17
Syne3-203ENSMUST00000109927 Afap1Q80YS6 731 aa16.13■□□□□ 0.17
Syne3-203ENSMUST00000109927 Pak3Q61036 559 aa16.12■□□□□ 0.17
Syne3-203ENSMUST00000109927 Neurod2Q62414 383 aa16.11■□□□□ 0.17
Syne3-203ENSMUST00000109927 Gm6268A2A3U9 297 aa16.11■□□□□ 0.17
Syne3-203ENSMUST00000109927 Grin2aP35436 1464 aa16.1■□□□□ 0.17
Syne3-203ENSMUST00000109927 Fam135aQ6NS59 1506 aa16.1■□□□□ 0.17
Syne3-203ENSMUST00000109927 Hsp90aa1P07901 733 aaKnown RBP16.1■□□□□ 0.17
Syne3-203ENSMUST00000109927 Dcaf11Q91VU6 549 aa16.09■□□□□ 0.17
Syne3-203ENSMUST00000109927 GphnQ8BUV3 769 aaKnown RBP16.07■□□□□ 0.16
Syne3-203ENSMUST00000109927 SynmQ70IV5 1561 aa16.07■□□□□ 0.16
Syne3-203ENSMUST00000109927 Fyb1O35601 819 aa16.07■□□□□ 0.16
Syne3-203ENSMUST00000109927 Gm156Q58A37 223 aa16.07■□□□□ 0.16
Syne3-203ENSMUST00000109927 Plin1Q8CGN5 517 aa16.07■□□□□ 0.16
Syne3-203ENSMUST00000109927 Cabp4Q8VHC5 271 aa16.07■□□□□ 0.16
Syne3-203ENSMUST00000109927 A2mQ6GQT1 1474 aa16.06■□□□□ 0.16
Syne3-203ENSMUST00000109927 Fbln2P37889 1221 aa16.06■□□□□ 0.16
Syne3-203ENSMUST00000109927 Usp40Q8BWR4 1235 aa16.06■□□□□ 0.16
Syne3-203ENSMUST00000109927 Mbd3Q9Z2D8 285 aaKnown RBP16.04■□□□□ 0.16
Syne3-203ENSMUST00000109927 Mink1Q9JM52 1308 aa16.04■□□□□ 0.16
Syne3-203ENSMUST00000109927 U2af1Q9D883 239 aaKnown RBP16.03■□□□□ 0.16
Syne3-203ENSMUST00000109927 Sirt1Q923E4 737 aa16.03■□□□□ 0.16
Syne3-203ENSMUST00000109927 Trim30dE9PWL0 497 aa16.02■□□□□ 0.16
Syne3-203ENSMUST00000109927 Znf326O88291 580 aa16.02■□□□□ 0.16
Syne3-203ENSMUST00000109927 AqrQ8CFQ3 1481 aaKnown RBP16.01■□□□□ 0.15
Syne3-203ENSMUST00000109927 Map7O88735 730 aa16.01■□□□□ 0.15
Syne3-203ENSMUST00000109927 Usp47Q8BY87 1376 aa16.01■□□□□ 0.15
Syne3-203ENSMUST00000109927 Ubap1lG3UW59 384 aa16.01■□□□□ 0.15
Syne3-203ENSMUST00000109927 Apbb1Q9QXJ1 710 aa16.01■□□□□ 0.15
Syne3-203ENSMUST00000109927 Ppm1fQ8CGA0 452 aa16■□□□□ 0.15
Syne3-203ENSMUST00000109927 Q9D9H8 365 aa15.99■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms