RNA–Protein interactions for RNA: ENSMUST00000109927.1

Syne3-203, Transcript of Nesprin-3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Syne3, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3-203ENSMUST00000109927 Rhox8Q6VSS7 320 aa22.81■■□□□ 1.24
Syne3-203ENSMUST00000109927 NischQ80TM9 1593 aa21.14■□□□□ 0.97
Syne3-203ENSMUST00000109927 Esf1Q3V1V3 845 aaKnown RBP20.56■□□□□ 0.88
Syne3-203ENSMUST00000109927 Ccdc136Q3TVA9 1136 aa20.38■□□□□ 0.85
Syne3-203ENSMUST00000109927 Abcc9P70170 1546 aa20.23■□□□□ 0.83
Syne3-203ENSMUST00000109927 Cngb1E1AZ71 1325 aa20.21■□□□□ 0.83
Syne3-203ENSMUST00000109927 Trim41Q5NCC3 630 aa20.15■□□□□ 0.82
Syne3-203ENSMUST00000109927 Zeb1Q64318 1117 aa19.98■□□□□ 0.79
Syne3-203ENSMUST00000109927 Npm2Q80W85 207 aa19.79■□□□□ 0.76
Syne3-203ENSMUST00000109927 Gm35339A0A140LHH9 1649 aa19.78■□□□□ 0.76
Syne3-203ENSMUST00000109927 Rpgrip1Q9EPQ2 1331 aa19.71■□□□□ 0.75
Syne3-203ENSMUST00000109927 Gab3Q8BSM5 595 aa19.58■□□□□ 0.73
Syne3-203ENSMUST00000109927 Ehmt2Q9Z148 1263 aaKnown RBP19.56■□□□□ 0.72
Syne3-203ENSMUST00000109927 Abcc8B2RUS7 1588 aa19.51■□□□□ 0.71
Syne3-203ENSMUST00000109927 Zcchc6Q5BLK4 1491 aaKnown RBP19.5■□□□□ 0.71
Syne3-203ENSMUST00000109927 Myt1lP97500 1187 aa19.43■□□□□ 0.7
Syne3-203ENSMUST00000109927 Il27Q8K3I6 234 aa19.42■□□□□ 0.7
Syne3-203ENSMUST00000109927 Ube2uB1AUC4 352 aa19.38■□□□□ 0.69
Syne3-203ENSMUST00000109927 Las1lA2BE28 776 aaKnown RBP19.12■□□□□ 0.65
Syne3-203ENSMUST00000109927 Npm1Q61937 292 aaKnown RBP19.01■□□□□ 0.63
Syne3-203ENSMUST00000109927 Wdr66E9Q743 1299 aa18.94■□□□□ 0.62
Syne3-203ENSMUST00000109927 Ccdc180J3QNE4 1664 aa18.84■□□□□ 0.61
Syne3-203ENSMUST00000109927 HrcG5E8J6 738 aa18.8■□□□□ 0.6
Syne3-203ENSMUST00000109927 Rtl1Q7M732 1744 aa18.8■□□□□ 0.6
Syne3-203ENSMUST00000109927 NacadQ5SWP3 1504 aa18.75■□□□□ 0.59
Syne3-203ENSMUST00000109927 Ubl4bQ9CQ84 188 aa18.7■□□□□ 0.58
Syne3-203ENSMUST00000109927 Brd4Q9ESU6 1400 aaKnown RBP18.57■□□□□ 0.56
Syne3-203ENSMUST00000109927 UbtfP25976 765 aaKnown RBP18.57■□□□□ 0.56
Syne3-203ENSMUST00000109927 Rb1cc1Q9ESK9 1588 aa18.55■□□□□ 0.56
Syne3-203ENSMUST00000109927 Ap3b1Q9Z1T1 1105 aa18.53■□□□□ 0.56
Syne3-203ENSMUST00000109927 NefmP08553 848 aa18.53■□□□□ 0.56
Syne3-203ENSMUST00000109927 Ifnlr1Q8CGK5 535 aa18.39■□□□□ 0.53
Syne3-203ENSMUST00000109927 Ttbk1Q6PCN3 1308 aa18.36■□□□□ 0.53
Syne3-203ENSMUST00000109927 Ercc6F8VPZ5 1481 aa18.36■□□□□ 0.53
Syne3-203ENSMUST00000109927 Pelp1Q9DBD5 1123 aaKnown RBP18.35■□□□□ 0.53
Syne3-203ENSMUST00000109927 Fam50aQ9WV03 339 aaKnown RBP18.31■□□□□ 0.52
Syne3-203ENSMUST00000109927 Acin1Q9JIX8 1338 aaKnown RBP18.3■□□□□ 0.52
Syne3-203ENSMUST00000109927 Kdm5dQ62240 1548 aa18.21■□□□□ 0.51
Syne3-203ENSMUST00000109927 Stra8P70278 393 aa18.2■□□□□ 0.5
Syne3-203ENSMUST00000109927 Gm13697A2AK42 830 aa18.18■□□□□ 0.5
Syne3-203ENSMUST00000109927 Os9Q8K2C7 672 aa18.16■□□□□ 0.5
Syne3-203ENSMUST00000109927 NclP09405 707 aaKnown RBP18.16■□□□□ 0.5
Syne3-203ENSMUST00000109927 Fkbp15Q6P9Q6 1216 aaKnown RBP18.15■□□□□ 0.5
Syne3-203ENSMUST00000109927 Baz1aO88379 1555 aa18.14■□□□□ 0.49
Syne3-203ENSMUST00000109927 Pds5bQ4VA53 1446 aaKnown RBP18.13■□□□□ 0.49
Syne3-203ENSMUST00000109927 Lmod2Q3UHZ5 550 aa18.11■□□□□ 0.49
Syne3-203ENSMUST00000109927 Rsf1E9PWW9 1441 aaKnown RBP18.1■□□□□ 0.49
Syne3-203ENSMUST00000109927 Kif15Q6P9L6 1387 aa18.06■□□□□ 0.48
Syne3-203ENSMUST00000109927 Plppr3Q7TPB0 716 aa18.03■□□□□ 0.48
Syne3-203ENSMUST00000109927 Hnrnpul2Q00PI9 745 aaKnown RBP18.02■□□□□ 0.47
Syne3-203ENSMUST00000109927 Dcaf1Q80TR8 1506 aa18.01■□□□□ 0.47
Syne3-203ENSMUST00000109927 Zbtb7cQ8VCZ7 619 aa18.01■□□□□ 0.47
Syne3-203ENSMUST00000109927 Anp32bQ9EST5 272 aaKnown RBP18■□□□□ 0.47
Syne3-203ENSMUST00000109927 Neurod1Q60867 357 aa17.96■□□□□ 0.47
Syne3-203ENSMUST00000109927 Slc24a1Q91WD8 1130 aa17.93■□□□□ 0.46
Syne3-203ENSMUST00000109927 Cep164Q5DU05 1446 aa17.89■□□□□ 0.46
Syne3-203ENSMUST00000109927 Ccdc18Q640L5 1455 aa17.89■□□□□ 0.45
Syne3-203ENSMUST00000109927 Sycp2Q9CUU3 1500 aa17.87■□□□□ 0.45
Syne3-203ENSMUST00000109927 Plekhg3Q4VAC9 1341 aa17.84■□□□□ 0.45
Syne3-203ENSMUST00000109927 Chic1Q8CBW7 227 aa17.82■□□□□ 0.44
Syne3-203ENSMUST00000109927 Gm13695A2AK44 830 aa17.79■□□□□ 0.44
Syne3-203ENSMUST00000109927 CenpbP27790 599 aa17.79■□□□□ 0.44
Syne3-203ENSMUST00000109927 Hdac5Q9Z2V6 1113 aa17.78■□□□□ 0.44
Syne3-203ENSMUST00000109927 Safb2Q80YR5 991 aaKnown RBP17.77■□□□□ 0.44
Syne3-203ENSMUST00000109927 NrdcQ8BHG1 1161 aa17.77■□□□□ 0.44
Syne3-203ENSMUST00000109927 Erich6D3Z6S9 713 aa17.75■□□□□ 0.43
Syne3-203ENSMUST00000109927 Atp1b4Q99ME6 356 aa17.75■□□□□ 0.43
Syne3-203ENSMUST00000109927 Clip1Q922J3 1391 aa17.74■□□□□ 0.43
Syne3-203ENSMUST00000109927 Cdk11bP24788 784 aaKnown RBP17.71■□□□□ 0.43
Syne3-203ENSMUST00000109927 Golga3P55937 1487 aa17.7■□□□□ 0.42
Syne3-203ENSMUST00000109927 TonslQ6NZL6 1363 aa17.69■□□□□ 0.42
Syne3-203ENSMUST00000109927 Arhgap27A2AB59 869 aa17.65■□□□□ 0.42
Syne3-203ENSMUST00000109927 Phldb1Q6PDH0 1371 aaKnown RBP17.62■□□□□ 0.41
Syne3-203ENSMUST00000109927 Atad2bE9Q166 1460 aaKnown RBP17.59■□□□□ 0.41
Syne3-203ENSMUST00000109927 Mier1Q5UAK0 511 aa17.55■□□□□ 0.4
Syne3-203ENSMUST00000109927 ScribQ80U72 1612 aa17.54■□□□□ 0.4
Syne3-203ENSMUST00000109927 Pcgf6Q99NA9 353 aa17.54■□□□□ 0.4
Syne3-203ENSMUST00000109927 Crybg2B7ZCC2 1516 aa17.53■□□□□ 0.4
Syne3-203ENSMUST00000109927 Clstn2Q9ER65 966 aa17.51■□□□□ 0.39
Syne3-203ENSMUST00000109927 Ppargc1bQ8VHJ7 1014 aa17.51■□□□□ 0.39
Syne3-203ENSMUST00000109927 Tnnt3Q9QZ47 272 aa17.49■□□□□ 0.39
Syne3-203ENSMUST00000109927 Ccer2J3QPU5 274 aa17.48■□□□□ 0.39
Syne3-203ENSMUST00000109927 NeflP08551 543 aa17.48■□□□□ 0.39
Syne3-203ENSMUST00000109927 Setd5Q5XJV7 1441 aa17.48■□□□□ 0.39
Syne3-203ENSMUST00000109927 Nop58Q6DFW4 536 aaKnown RBP17.48■□□□□ 0.39
Syne3-203ENSMUST00000109927 Ppp1r18Q8BQ30 594 aa17.46■□□□□ 0.38
Syne3-203ENSMUST00000109927 BlmO88700 1416 aa17.45■□□□□ 0.38
Syne3-203ENSMUST00000109927 Cux2P70298 1426 aa17.45■□□□□ 0.38
Syne3-203ENSMUST00000109927 Amer1Q7TS75 1132 aa17.39■□□□□ 0.37
Syne3-203ENSMUST00000109927 Chic2Q9D9G3 165 aa17.37■□□□□ 0.37
Syne3-203ENSMUST00000109927 Eif5bQ05D44 1216 aaKnown RBP17.36■□□□□ 0.37
Syne3-203ENSMUST00000109927 AknaQ80VW7 1404 aa17.35■□□□□ 0.37
Syne3-203ENSMUST00000109927 Zbtb4Q5F293 982 aa17.34■□□□□ 0.37
Syne3-203ENSMUST00000109927 Supt5hO55201 1082 aaKnown RBP17.32■□□□□ 0.36
Syne3-203ENSMUST00000109927 MyclP10166 368 aa17.31■□□□□ 0.36
Syne3-203ENSMUST00000109927 Smarca4Q3TKT4 1613 aaKnown RBP17.31■□□□□ 0.36
Syne3-203ENSMUST00000109927 CftrP26361 1476 aa17.29■□□□□ 0.36
Syne3-203ENSMUST00000109927 P3h3Q8CG70 732 aa17.27■□□□□ 0.36
Syne3-203ENSMUST00000109927 Fmn1Q05860 1466 aa17.27■□□□□ 0.36
Syne3-203ENSMUST00000109927 Eea1Q8BL66 1411 aa17.25■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms