RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Ifit1bl1D3Z6F0 470 aa8.54□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Kdm5dQ62240 1548 aa8.54□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Erich6bQ9D4S6 220 aa8.54□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Cep162Q6ZQ06 1403 aa8.54□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Sin3aQ60520 1274 aaKnown RBP8.53□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Ecm2Q5FW85 670 aa8.53□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Plin1Q8CGN5 517 aa8.53□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Rtf1A2AQ19 715 aaKnown RBP8.53□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Dnttip2Q8R2M2 758 aaKnown RBP8.53□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Dnai1Q8C0M8 701 aa8.52□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Stk26Q99JT2 416 aa8.52□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Ccdc88bQ4QRL3 1481 aa8.52□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Gtf2e1Q9D0D5 440 aa8.52□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Trak1Q6PD31 939 aa8.52□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Fyco1Q8VDC1 1437 aa8.51□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Anapc15P60007 132 aa8.51□□□□□ -1.05
Scn8a-205ENSMUST00000108910 U2af1Q9D883 239 aaKnown RBP8.51□□□□□ -1.05
Scn8a-205ENSMUST00000108910 EspnQ9ET47 871 aa8.51□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Arhgap35Q91YM2 1499 aa8.51□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Bcl11aQ9QYE3 773 aa8.51□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Sart3Q9JLI8 962 aaKnown RBP8.51□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Zscan21Q07231 555 aa8.5□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Tmco5bQ80X59 307 aa8.5□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Pcmtd1P59913 357 aa8.5□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Mak16Q8BGS0 296 aaKnown RBP8.5□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Rpap1Q80TE0 1409 aa8.49□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Fmn1Q05860 1466 aa8.49□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Aebp1Q640N1 1128 aa8.49□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Cluap1Q8R3P7 413 aa8.49□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Mphosph9A6H5Y1 991 aa8.49□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Ppp1r18Q8BQ30 594 aa8.49□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Golga2Q921M4 999 aa8.49□□□□□ -1.05
Scn8a-205ENSMUST00000108910 PtmsQ9D0J8 101 aaKnown RBP8.49□□□□□ -1.05
Scn8a-205ENSMUST00000108910 AknaQ80VW7 1404 aa8.49□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Tnnt1O88346 262 aa8.48□□□□□ -1.05
Scn8a-205ENSMUST00000108910 AU015836B2RUM3 263 aa8.48□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Rock2P70336 1388 aa8.48□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Gm973E9Q295 1059 aa8.48□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Znf330Q922H9 316 aa8.48□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Mfap1aC0HKD8 439 aaKnown RBP8.47□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Mfap1bC0HKD9 439 aaKnown RBP8.47□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Birc3O08863 600 aa8.47□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Dcaf11Q91VU6 549 aa8.47□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Cabp1Q9JLK7 227 aa8.47□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Arid3cA6PWV5 409 aa8.47□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Baz1bQ9Z277 1479 aa8.47□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Eif4g2Q62448 906 aaKnown RBP8.46□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Iffo2Q8R2V2 512 aa8.46□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Q3TQI7 289 aaKnown RBP8.46□□□□□ -1.05
Scn8a-205ENSMUST00000108910 Ipo9Q91YE6 1041 aa8.46□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Znf316Q6PGE4 1016 aa8.46□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Tnnt2P50752 301 aa8.46□□□□□ -1.06
Scn8a-205ENSMUST00000108910 CrbnQ8C7D2 445 aa8.45□□□□□ -1.06
Scn8a-205ENSMUST00000108910 CgnP59242 1191 aa8.45□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Ipo8Q7TMY7 1010 aa8.45□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Senp3Q9EP97 568 aaKnown RBP8.45□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Nol10Q5RJG1 687 aaKnown RBP8.45□□□□□ -1.06
Scn8a-205ENSMUST00000108910 MsnP26041 577 aaKnown RBP8.45□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Sox12Q04890 314 aa8.45□□□□□ -1.06
Scn8a-205ENSMUST00000108910 GorabQ8BRM2 368 aa8.44□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Pde3bQ61409 1100 aa8.44□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Lemd3Q9WU40 921 aa8.44□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Spag9Q58A65 1321 aaKnown RBP8.43□□□□□ -1.06
Scn8a-205ENSMUST00000108910 CntlnA2AM05 1397 aa8.43□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Nup155Q99P88 1391 aaKnown RBP8.43□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Calcoco2A2A6M5 331 aa8.43□□□□□ -1.06
Scn8a-205ENSMUST00000108910 MecomP14404 1042 aa8.43□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Pds5bQ4VA53 1446 aaKnown RBP8.43□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Plekhh2Q8C115 1491 aa8.43□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Psme1P97371 249 aa8.42□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Ksr2Q3UVC0 959 aa8.42□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Srcin1Q9QWI6 1250 aa8.42□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Pibf1E9Q6K3 756 aa8.41□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Txndc2Q6P902 515 aa8.41□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Ccar1Q8CH18 1146 aaKnown RBP8.41□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Tpm3-rs7D3Z2H9 248 aa8.41□□□□□ -1.06
Scn8a-205ENSMUST00000108910 R3hcc1Q8BSI6 488 aa8.4□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Q8BT18 775 aa8.4□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Slc4a1apE9PX68 744 aa8.4□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Ggt6Q6PDE7 497 aa8.4□□□□□ -1.06
Scn8a-205ENSMUST00000108910 Brpf1B2RRD7 1212 aa8.4□□□□□ -1.06
Scn8a-205ENSMUST00000108910 CrebrfQ8CDG5 640 aaKnown RBP8.4□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Kif3bQ61771 747 aa8.39□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Chmp3Q9CQ10 224 aa8.39□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Dhx57Q6P5D3 1388 aaKnown RBP8.39□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Smarce1O54941 411 aaKnown RBP8.39□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Cald1E9QA15 768 aaKnown RBP8.38□□□□□ -1.07
Scn8a-205ENSMUST00000108910 ChgaP26339 463 aaKnown RBP8.38□□□□□ -1.07
Scn8a-205ENSMUST00000108910 SlkO54988 1233 aa8.37□□□□□ -1.07
Scn8a-205ENSMUST00000108910 RdxP26043 583 aaKnown RBP8.37□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Fan1Q69ZT1 1020 aa8.37□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Dnai2A2AC93 623 aa8.37□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Ccdc146E9Q9F7 977 aa8.37□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Ylpm1Q9R0I7 1386 aaKnown RBP8.36□□□□□ -1.07
Scn8a-205ENSMUST00000108910 CenpjQ569L8 1344 aa8.36□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Kiaa0754Q69ZZ9 979 aa8.36□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Rrp12Q6P5B0 1295 aaKnown RBP8.36□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Ccnb3Q810T2 1396 aa8.36□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Atp6v1dP57746 247 aa8.35□□□□□ -1.07
Scn8a-205ENSMUST00000108910 Cux2P70298 1426 aa8.35□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 51.6 ms