RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 PtmaP26350 111 aa15.53■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Eif4g2Q62448 906 aaKnown RBP15.53■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Rtf1A2AQ19 715 aaKnown RBP15.53■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Stk26Q99JT2 416 aa15.52■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Phldb1Q6PDH0 1371 aaKnown RBP15.52■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Tmf1B9EKI3 1091 aa15.52■□□□□ 0.07
Col8a1-201ENSMUST00000089332 Ythdc1E9Q5K9 736 aaKnown RBP15.52■□□□□ 0.07
Col8a1-201ENSMUST00000089332 Rwdd1Q9CQK7 243 aa15.52■□□□□ 0.07
Col8a1-201ENSMUST00000089332 Plcb2A3KGF7 1181 aa15.51■□□□□ 0.07
Col8a1-201ENSMUST00000089332 Arhgap35Q91YM2 1499 aa15.51■□□□□ 0.07
Col8a1-201ENSMUST00000089332 HnrnpuQ8VEK3 800 aaKnown RBP15.51■□□□□ 0.07
Col8a1-201ENSMUST00000089332 SafbD3YXK2 937 aaKnown RBP15.51■□□□□ 0.07
Col8a1-201ENSMUST00000089332 Hsp90b1P08113 802 aaKnown RBP15.5■□□□□ 0.07
Col8a1-201ENSMUST00000089332 ScribQ80U72 1612 aa15.5■□□□□ 0.07
Col8a1-201ENSMUST00000089332 PnnO35691 725 aaKnown RBP15.5■□□□□ 0.07
Col8a1-201ENSMUST00000089332 Psme1P97371 249 aa15.49■□□□□ 0.07
Col8a1-201ENSMUST00000089332 KnstrnQ9D9Z1 312 aaKnown RBP15.49■□□□□ 0.07
Col8a1-201ENSMUST00000089332 Carmil1Q6EDY6 1374 aa15.47■□□□□ 0.07
Col8a1-201ENSMUST00000089332 Atad2bE9Q166 1460 aaKnown RBP15.47■□□□□ 0.07
Col8a1-201ENSMUST00000089332 HdgfP51859 237 aaKnown RBP15.47■□□□□ 0.07
Col8a1-201ENSMUST00000089332 Txndc2Q6P902 515 aa15.46■□□□□ 0.07
Col8a1-201ENSMUST00000089332 Kif3bQ61771 747 aa15.46■□□□□ 0.07
Col8a1-201ENSMUST00000089332 Exoc6Q8R313 802 aa15.46■□□□□ 0.07
Col8a1-201ENSMUST00000089332 Armcx1Q9CX83 456 aa15.46■□□□□ 0.06
Col8a1-201ENSMUST00000089332 Ggt6Q6PDE7 497 aa15.45■□□□□ 0.06
Col8a1-201ENSMUST00000089332 Dbr1Q923B1 550 aa15.45■□□□□ 0.06
Col8a1-201ENSMUST00000089332 Nup155Q99P88 1391 aaKnown RBP15.44■□□□□ 0.06
Col8a1-201ENSMUST00000089332 MccE9PWI3 1003 aa15.44■□□□□ 0.06
Col8a1-201ENSMUST00000089332 Speer4f1Q9D5Q6 258 aa15.44■□□□□ 0.06
Col8a1-201ENSMUST00000089332 Sart3Q9JLI8 962 aaKnown RBP15.44■□□□□ 0.06
Col8a1-201ENSMUST00000089332 Zscan21Q07231 555 aa15.43■□□□□ 0.06
Col8a1-201ENSMUST00000089332 U2af1Q9D883 239 aaKnown RBP15.43■□□□□ 0.06
Col8a1-201ENSMUST00000089332 U2surpQ6NV83 1029 aaKnown RBP15.43■□□□□ 0.06
Col8a1-201ENSMUST00000089332 Lmod3E9QA62 571 aa15.42■□□□□ 0.06
Col8a1-201ENSMUST00000089332 Plekhh2Q8C115 1491 aa15.42■□□□□ 0.06
Col8a1-201ENSMUST00000089332 Casc1Q6TDU8 730 aa15.41■□□□□ 0.06
Col8a1-201ENSMUST00000089332 Pde3bQ61409 1100 aa15.41■□□□□ 0.06
Col8a1-201ENSMUST00000089332 Clstn1Q9EPL2 979 aa15.41■□□□□ 0.06
Col8a1-201ENSMUST00000089332 Rock2P70336 1388 aa15.41■□□□□ 0.06
Col8a1-201ENSMUST00000089332 Birc3O08863 600 aa15.4■□□□□ 0.06
Col8a1-201ENSMUST00000089332 Srcin1Q9QWI6 1250 aa15.4■□□□□ 0.06
Col8a1-201ENSMUST00000089332 Slc4a3P16283 1227 aa15.4■□□□□ 0.06
Col8a1-201ENSMUST00000089332 Ccdc27Q3V036 639 aa15.4■□□□□ 0.06
Col8a1-201ENSMUST00000089332 Stard8Q8K031 1019 aa15.4■□□□□ 0.06
Col8a1-201ENSMUST00000089332 B4galnt3Q6L8S8 986 aa15.4■□□□□ 0.06
Col8a1-201ENSMUST00000089332 MlecQ6ZQI3 291 aaKnown RBP15.4■□□□□ 0.06
Col8a1-201ENSMUST00000089332 Dcaf11Q91VU6 549 aa15.39■□□□□ 0.05
Col8a1-201ENSMUST00000089332 Sh3bp5Q9Z131 463 aa15.39■□□□□ 0.05
Col8a1-201ENSMUST00000089332 Smarca4Q3TKT4 1613 aaKnown RBP15.39■□□□□ 0.05
Col8a1-201ENSMUST00000089332 LrpprcQ6PB66 1392 aaKnown RBP15.39■□□□□ 0.05
Col8a1-201ENSMUST00000089332 Mak16Q8BGS0 296 aaKnown RBP15.38■□□□□ 0.05
Col8a1-201ENSMUST00000089332 Sart1Q9Z315 806 aaKnown RBP15.38■□□□□ 0.05
Col8a1-201ENSMUST00000089332 Plin1Q8CGN5 517 aa15.37■□□□□ 0.05
Col8a1-201ENSMUST00000089332 Ccnb3Q810T2 1396 aa15.37■□□□□ 0.05
Col8a1-201ENSMUST00000089332 Q3TQI7 289 aaKnown RBP15.37■□□□□ 0.05
Col8a1-201ENSMUST00000089332 Golga2Q921M4 999 aa15.37■□□□□ 0.05
Col8a1-201ENSMUST00000089332 Spag9Q58A65 1321 aaKnown RBP15.36■□□□□ 0.05
Col8a1-201ENSMUST00000089332 Nol10Q5RJG1 687 aaKnown RBP15.36■□□□□ 0.05
Col8a1-201ENSMUST00000089332 Sox12Q04890 314 aa15.35■□□□□ 0.05
Col8a1-201ENSMUST00000089332 Tmco5bQ80X59 307 aa15.33■□□□□ 0.05
Col8a1-201ENSMUST00000089332 Rassf8Q8CJ96 419 aa15.33■□□□□ 0.04
Col8a1-201ENSMUST00000089332 Chmp5Q9D7S9 219 aa15.33■□□□□ 0.04
Col8a1-201ENSMUST00000089332 CenpjQ569L8 1344 aa15.32■□□□□ 0.04
Col8a1-201ENSMUST00000089332 Ecm2Q5FW85 670 aa15.32■□□□□ 0.04
Col8a1-201ENSMUST00000089332 Tcerg1Q8CGF7 1100 aaKnown RBP15.32■□□□□ 0.04
Col8a1-201ENSMUST00000089332 Znf316Q6PGE4 1016 aa15.31■□□□□ 0.04
Col8a1-201ENSMUST00000089332 UacaQ8CGB3 1411 aa15.31■□□□□ 0.04
Col8a1-201ENSMUST00000089332 PtmsQ9D0J8 101 aaKnown RBP15.31■□□□□ 0.04
Col8a1-201ENSMUST00000089332 Dhx29Q6PGC1 1365 aaKnown RBP15.31■□□□□ 0.04
Col8a1-201ENSMUST00000089332 Cttnbp2B9EJA2 1648 aa15.3■□□□□ 0.04
Col8a1-201ENSMUST00000089332 Utp14aQ640M1 767 aaKnown RBP15.29■□□□□ 0.04
Col8a1-201ENSMUST00000089332 Supt16hQ920B9 1047 aa15.28■□□□□ 0.04
Col8a1-201ENSMUST00000089332 Tnnt1O88346 262 aa15.27■□□□□ 0.04
Col8a1-201ENSMUST00000089332 Fan1Q69ZT1 1020 aa15.27■□□□□ 0.04
Col8a1-201ENSMUST00000089332 Ap3b2Q9JME5 1082 aa15.27■□□□□ 0.04
Col8a1-201ENSMUST00000089332 Slc4a1apE9PX68 744 aa15.26■□□□□ 0.03
Col8a1-201ENSMUST00000089332 Q8BT18 775 aa15.26■□□□□ 0.03
Col8a1-201ENSMUST00000089332 EspnQ9ET47 871 aa15.26■□□□□ 0.03
Col8a1-201ENSMUST00000089332 Dnai2A2AC93 623 aa15.26■□□□□ 0.03
Col8a1-201ENSMUST00000089332 Anapc15P60007 132 aa15.26■□□□□ 0.03
Col8a1-201ENSMUST00000089332 Pabpn1Q8CCS6 302 aaKnown RBP15.25■□□□□ 0.03
Col8a1-201ENSMUST00000089332 Adam1bQ8R534 806 aa15.25■□□□□ 0.03
Col8a1-201ENSMUST00000089332 WrnO09053 1401 aa15.24■□□□□ 0.03
Col8a1-201ENSMUST00000089332 Ccar1Q8CH18 1146 aaKnown RBP15.24■□□□□ 0.03
Col8a1-201ENSMUST00000089332 Usp47Q8BY87 1376 aa15.23■□□□□ 0.03
Col8a1-201ENSMUST00000089332 Gm973E9Q295 1059 aa15.22■□□□□ 0.03
Col8a1-201ENSMUST00000089332 MecomP14404 1042 aa15.22■□□□□ 0.03
Col8a1-201ENSMUST00000089332 Iffo2Q8R2V2 512 aa15.21■□□□□ 0.03
Col8a1-201ENSMUST00000089332 Ksr2Q3UVC0 959 aa15.2■□□□□ 0.02
Col8a1-201ENSMUST00000089332 CrbnQ8C7D2 445 aa15.2■□□□□ 0.02
Col8a1-201ENSMUST00000089332 Iqgap2Q3UQ44 1575 aa15.2■□□□□ 0.02
Col8a1-201ENSMUST00000089332 Cluap1Q8R3P7 413 aa15.2■□□□□ 0.02
Col8a1-201ENSMUST00000089332 Znf330Q922H9 316 aa15.2■□□□□ 0.02
Col8a1-201ENSMUST00000089332 Soga1E1U8D0 1418 aa15.18■□□□□ 0.02
Col8a1-201ENSMUST00000089332 Stk31Q99MW1 1018 aa15.18■□□□□ 0.02
Col8a1-201ENSMUST00000089332 Dnai1Q8C0M8 701 aa15.18■□□□□ 0.02
Col8a1-201ENSMUST00000089332 Bcl11aQ9QYE3 773 aa15.18■□□□□ 0.02
Col8a1-201ENSMUST00000089332 Jph4Q80WT0 628 aa15.17■□□□□ 0.02
Col8a1-201ENSMUST00000089332 Chmp3Q9CQ10 224 aa15.17■□□□□ 0.02
Col8a1-201ENSMUST00000089332 Spryd3E9Q9B3 442 aa15.16■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms