RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Ccdc88bQ4QRL3 1481 aa18.73■□□□□ 0.59
Pcdh20-201ENSMUST00000061628 1700019A02RikA0A087WPV9 146 aa18.72■□□□□ 0.59
Pcdh20-201ENSMUST00000061628 EspnQ9ET47 871 aa18.72■□□□□ 0.59
Pcdh20-201ENSMUST00000061628 Rtf1A2AQ19 715 aaKnown RBP18.71■□□□□ 0.59
Pcdh20-201ENSMUST00000061628 Gm973E9Q295 1059 aa18.71■□□□□ 0.59
Pcdh20-201ENSMUST00000061628 Speer4f1Q9D5Q6 258 aa18.71■□□□□ 0.59
Pcdh20-201ENSMUST00000061628 Mphosph9A6H5Y1 991 aa18.71■□□□□ 0.59
Pcdh20-201ENSMUST00000061628 Cnga1P29974 684 aa18.7■□□□□ 0.58
Pcdh20-201ENSMUST00000061628 Baz1bQ9Z277 1479 aa18.7■□□□□ 0.58
Pcdh20-201ENSMUST00000061628 Armcx1Q9CX83 456 aa18.7■□□□□ 0.58
Pcdh20-201ENSMUST00000061628 Irx3P81067 507 aa18.69■□□□□ 0.58
Pcdh20-201ENSMUST00000061628 Supt16hQ920B9 1047 aa18.69■□□□□ 0.58
Pcdh20-201ENSMUST00000061628 Exoc6Q8R313 802 aa18.69■□□□□ 0.58
Pcdh20-201ENSMUST00000061628 Ifit1bl1D3Z6F0 470 aa18.68■□□□□ 0.58
Pcdh20-201ENSMUST00000061628 Dnai1Q8C0M8 701 aa18.68■□□□□ 0.58
Pcdh20-201ENSMUST00000061628 AU015836B2RUM3 263 aa18.67■□□□□ 0.58
Pcdh20-201ENSMUST00000061628 Stard8Q8K031 1019 aa18.67■□□□□ 0.58
Pcdh20-201ENSMUST00000061628 Lemd3Q9WU40 921 aa18.67■□□□□ 0.58
Pcdh20-201ENSMUST00000061628 Rock2P70336 1388 aa18.66■□□□□ 0.58
Pcdh20-201ENSMUST00000061628 Trak1Q6PD31 939 aa18.66■□□□□ 0.58
Pcdh20-201ENSMUST00000061628 Rsph4aQ8BYM7 716 aa18.66■□□□□ 0.58
Pcdh20-201ENSMUST00000061628 Cabp1Q9JLK7 227 aa18.64■□□□□ 0.57
Pcdh20-201ENSMUST00000061628 Crybg2B7ZCC2 1516 aa18.63■□□□□ 0.57
Pcdh20-201ENSMUST00000061628 Golga2Q921M4 999 aa18.63■□□□□ 0.57
Pcdh20-201ENSMUST00000061628 Rpap1Q80TE0 1409 aa18.63■□□□□ 0.57
Pcdh20-201ENSMUST00000061628 Sh3bp5Q9Z131 463 aa18.63■□□□□ 0.57
Pcdh20-201ENSMUST00000061628 Rtn4Q99P72 1162 aaKnown RBP18.62■□□□□ 0.57
Pcdh20-201ENSMUST00000061628 MyclP10166 368 aa18.62■□□□□ 0.57
Pcdh20-201ENSMUST00000061628 U2af1Q9D883 239 aaKnown RBP18.61■□□□□ 0.57
Pcdh20-201ENSMUST00000061628 SafbD3YXK2 937 aaKnown RBP18.6■□□□□ 0.57
Pcdh20-201ENSMUST00000061628 Carmil1Q6EDY6 1374 aa18.59■□□□□ 0.57
Pcdh20-201ENSMUST00000061628 Ipo9Q91YE6 1041 aa18.58■□□□□ 0.57
Pcdh20-201ENSMUST00000061628 Nup155Q99P88 1391 aaKnown RBP18.58■□□□□ 0.56
Pcdh20-201ENSMUST00000061628 Ipo8Q7TMY7 1010 aa18.57■□□□□ 0.56
Pcdh20-201ENSMUST00000061628 Plekhh2Q8C115 1491 aa18.57■□□□□ 0.56
Pcdh20-201ENSMUST00000061628 AknaQ80VW7 1404 aa18.57■□□□□ 0.56
Pcdh20-201ENSMUST00000061628 Srcin1Q9QWI6 1250 aa18.56■□□□□ 0.56
Pcdh20-201ENSMUST00000061628 U2surpQ6NV83 1029 aaKnown RBP18.56■□□□□ 0.56
Pcdh20-201ENSMUST00000061628 Calcoco2A2A6M5 331 aa18.55■□□□□ 0.56
Pcdh20-201ENSMUST00000061628 UacaQ8CGB3 1411 aa18.55■□□□□ 0.56
Pcdh20-201ENSMUST00000061628 Dcaf11Q91VU6 549 aa18.55■□□□□ 0.56
Pcdh20-201ENSMUST00000061628 Spag9Q58A65 1321 aaKnown RBP18.54■□□□□ 0.56
Pcdh20-201ENSMUST00000061628 Sin3aQ60520 1274 aaKnown RBP18.54■□□□□ 0.56
Pcdh20-201ENSMUST00000061628 Slc4a3P16283 1227 aa18.54■□□□□ 0.56
Pcdh20-201ENSMUST00000061628 Ppp1r18Q8BQ30 594 aa18.54■□□□□ 0.56
Pcdh20-201ENSMUST00000061628 Dnttip2Q8R2M2 758 aaKnown RBP18.54■□□□□ 0.56
Pcdh20-201ENSMUST00000061628 Spryd3E9Q9B3 442 aa18.53■□□□□ 0.56
Pcdh20-201ENSMUST00000061628 Rassf8Q8CJ96 419 aa18.53■□□□□ 0.56
Pcdh20-201ENSMUST00000061628 Ccar1Q8CH18 1146 aaKnown RBP18.52■□□□□ 0.56
Pcdh20-201ENSMUST00000061628 Smarce1O54941 411 aaKnown RBP18.52■□□□□ 0.56
Pcdh20-201ENSMUST00000061628 Q3TQI7 289 aaKnown RBP18.52■□□□□ 0.56
Pcdh20-201ENSMUST00000061628 R3hcc1Q8BSI6 488 aa18.51■□□□□ 0.55
Pcdh20-201ENSMUST00000061628 Dnai2A2AC93 623 aa18.51■□□□□ 0.55
Pcdh20-201ENSMUST00000061628 Stk26Q99JT2 416 aa18.51■□□□□ 0.55
Pcdh20-201ENSMUST00000061628 Tmco5bQ80X59 307 aa18.51■□□□□ 0.55
Pcdh20-201ENSMUST00000061628 Erich6bQ9D4S6 220 aa18.51■□□□□ 0.55
Pcdh20-201ENSMUST00000061628 CftrP26361 1476 aa18.51■□□□□ 0.55
Pcdh20-201ENSMUST00000061628 Sycp2Q9CUU3 1500 aa18.5■□□□□ 0.55
Pcdh20-201ENSMUST00000061628 Nol10Q5RJG1 687 aaKnown RBP18.49■□□□□ 0.55
Pcdh20-201ENSMUST00000061628 HdgfP51859 237 aaKnown RBP18.49■□□□□ 0.55
Pcdh20-201ENSMUST00000061628 Cux2P70298 1426 aa18.49■□□□□ 0.55
Pcdh20-201ENSMUST00000061628 Anapc15P60007 132 aa18.49■□□□□ 0.55
Pcdh20-201ENSMUST00000061628 Iffo2Q8R2V2 512 aa18.48■□□□□ 0.55
Pcdh20-201ENSMUST00000061628 Atp6v1dP57746 247 aa18.47■□□□□ 0.55
Pcdh20-201ENSMUST00000061628 Arid3cA6PWV5 409 aa18.47■□□□□ 0.55
Pcdh20-201ENSMUST00000061628 CenpjQ569L8 1344 aa18.47■□□□□ 0.55
Pcdh20-201ENSMUST00000061628 Clstn1Q9EPL2 979 aa18.46■□□□□ 0.55
Pcdh20-201ENSMUST00000061628 Cgnl1Q6AW69 1298 aa18.46■□□□□ 0.55
Pcdh20-201ENSMUST00000061628 Psme1P97371 249 aa18.46■□□□□ 0.55
Pcdh20-201ENSMUST00000061628 4933402E13RikQ9D4D2 429 aa18.45■□□□□ 0.54
Pcdh20-201ENSMUST00000061628 Birc3O08863 600 aa18.45■□□□□ 0.54
Pcdh20-201ENSMUST00000061628 MsnP26041 577 aaKnown RBP18.45■□□□□ 0.54
Pcdh20-201ENSMUST00000061628 MecomP14404 1042 aa18.44■□□□□ 0.54
Pcdh20-201ENSMUST00000061628 Tpm3-rs7D3Z2H9 248 aa18.44■□□□□ 0.54
Pcdh20-201ENSMUST00000061628 AampJ3QN89 436 aa18.44■□□□□ 0.54
Pcdh20-201ENSMUST00000061628 Pcmtd1P59913 357 aa18.43■□□□□ 0.54
Pcdh20-201ENSMUST00000061628 Kif3bQ61771 747 aa18.43■□□□□ 0.54
Pcdh20-201ENSMUST00000061628 Phldb1Q6PDH0 1371 aaKnown RBP18.42■□□□□ 0.54
Pcdh20-201ENSMUST00000061628 Mfap1aC0HKD8 439 aaKnown RBP18.41■□□□□ 0.54
Pcdh20-201ENSMUST00000061628 Mfap1bC0HKD9 439 aaKnown RBP18.41■□□□□ 0.54
Pcdh20-201ENSMUST00000061628 Cluap1Q8R3P7 413 aa18.41■□□□□ 0.54
Pcdh20-201ENSMUST00000061628 Tnnt2P50752 301 aa18.4■□□□□ 0.54
Pcdh20-201ENSMUST00000061628 Ksr2Q3UVC0 959 aa18.4■□□□□ 0.54
Pcdh20-201ENSMUST00000061628 Ccnb3Q810T2 1396 aa18.39■□□□□ 0.54
Pcdh20-201ENSMUST00000061628 Slc4a1apE9PX68 744 aa18.39■□□□□ 0.53
Pcdh20-201ENSMUST00000061628 Txndc2Q6P902 515 aa18.39■□□□□ 0.53
Pcdh20-201ENSMUST00000061628 RdxP26043 583 aaKnown RBP18.39■□□□□ 0.53
Pcdh20-201ENSMUST00000061628 Bcl11aQ9QYE3 773 aa18.39■□□□□ 0.53
Pcdh20-201ENSMUST00000061628 Cald1E9QA15 768 aaKnown RBP18.37■□□□□ 0.53
Pcdh20-201ENSMUST00000061628 Rrp12Q6P5B0 1295 aaKnown RBP18.37■□□□□ 0.53
Pcdh20-201ENSMUST00000061628 CrbnQ8C7D2 445 aa18.36■□□□□ 0.53
Pcdh20-201ENSMUST00000061628 Smg6P61406 1418 aaKnown RBP18.36■□□□□ 0.53
Pcdh20-201ENSMUST00000061628 Plin1Q8CGN5 517 aa18.35■□□□□ 0.53
Pcdh20-201ENSMUST00000061628 Sart1Q9Z315 806 aaKnown RBP18.35■□□□□ 0.53
Pcdh20-201ENSMUST00000061628 CgnP59242 1191 aa18.35■□□□□ 0.53
Pcdh20-201ENSMUST00000061628 Rapgef2Q8CHG7 1496 aa18.35■□□□□ 0.53
Pcdh20-201ENSMUST00000061628 Cspp1B2RX88 1205 aa18.34■□□□□ 0.53
Pcdh20-201ENSMUST00000061628 Ddrgk1Q80WW9 315 aa18.33■□□□□ 0.53
Pcdh20-201ENSMUST00000061628 Znf330Q922H9 316 aa18.33■□□□□ 0.52
Pcdh20-201ENSMUST00000061628 Usp47Q8BY87 1376 aa18.33■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 44.5 ms