RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 AknaQ80VW7 1404 aa22.09■■□□□ 1.13
Usp48-201ENSMUST00000055131 Tcerg1Q8CGF7 1100 aaKnown RBP22.08■■□□□ 1.13
Usp48-201ENSMUST00000055131 Zfp777B9EKF4 885 aa22.07■■□□□ 1.12
Usp48-201ENSMUST00000055131 MccE9PWI3 1003 aa22.07■■□□□ 1.12
Usp48-201ENSMUST00000055131 Chmp5Q9D7S9 219 aa22.06■■□□□ 1.12
Usp48-201ENSMUST00000055131 Gtf2e1Q9D0D5 440 aa22.05■■□□□ 1.12
Usp48-201ENSMUST00000055131 Trak1Q6PD31 939 aa22.04■■□□□ 1.12
Usp48-201ENSMUST00000055131 Ccdc88bQ4QRL3 1481 aa22.04■■□□□ 1.12
Usp48-201ENSMUST00000055131 Tmf1B9EKI3 1091 aa22.03■■□□□ 1.12
Usp48-201ENSMUST00000055131 HnrnpuQ8VEK3 800 aaKnown RBP22.03■■□□□ 1.12
Usp48-201ENSMUST00000055131 Rtf1A2AQ19 715 aaKnown RBP22.03■■□□□ 1.12
Usp48-201ENSMUST00000055131 Cep162Q6ZQ06 1403 aa22.02■■□□□ 1.12
Usp48-201ENSMUST00000055131 Aebp1Q640N1 1128 aa22.02■■□□□ 1.12
Usp48-201ENSMUST00000055131 Erich6bQ9D4S6 220 aa22.01■■□□□ 1.11
Usp48-201ENSMUST00000055131 Irx3P81067 507 aa22■■□□□ 1.11
Usp48-201ENSMUST00000055131 Tmco5bQ80X59 307 aa22■■□□□ 1.11
Usp48-201ENSMUST00000055131 Dnttip2Q8R2M2 758 aaKnown RBP22■■□□□ 1.11
Usp48-201ENSMUST00000055131 Sycp2Q9CUU3 1500 aa22■■□□□ 1.11
Usp48-201ENSMUST00000055131 U2af1Q9D883 239 aaKnown RBP22■■□□□ 1.11
Usp48-201ENSMUST00000055131 Mphosph9A6H5Y1 991 aa21.99■■□□□ 1.11
Usp48-201ENSMUST00000055131 Rassf8Q8CJ96 419 aa21.99■■□□□ 1.11
Usp48-201ENSMUST00000055131 Zscan21Q07231 555 aa21.98■■□□□ 1.11
Usp48-201ENSMUST00000055131 Cabp1Q9JLK7 227 aa21.98■■□□□ 1.11
Usp48-201ENSMUST00000055131 Dnai1Q8C0M8 701 aa21.98■■□□□ 1.11
Usp48-201ENSMUST00000055131 Cluap1Q8R3P7 413 aa21.97■■□□□ 1.11
Usp48-201ENSMUST00000055131 EspnQ9ET47 871 aa21.97■■□□□ 1.11
Usp48-201ENSMUST00000055131 Pcmtd1P59913 357 aa21.97■■□□□ 1.11
Usp48-201ENSMUST00000055131 Adam1bQ8R534 806 aa21.96■■□□□ 1.11
Usp48-201ENSMUST00000055131 Znf330Q922H9 316 aa21.96■■□□□ 1.11
Usp48-201ENSMUST00000055131 Dcaf11Q91VU6 549 aa21.95■■□□□ 1.11
Usp48-201ENSMUST00000055131 Rpap1Q80TE0 1409 aa21.95■■□□□ 1.1
Usp48-201ENSMUST00000055131 Mak16Q8BGS0 296 aaKnown RBP21.94■■□□□ 1.1
Usp48-201ENSMUST00000055131 Senp3Q9EP97 568 aaKnown RBP21.94■■□□□ 1.1
Usp48-201ENSMUST00000055131 Bcl11aQ9QYE3 773 aa21.94■■□□□ 1.1
Usp48-201ENSMUST00000055131 Birc3O08863 600 aa21.93■■□□□ 1.1
Usp48-201ENSMUST00000055131 Tnnt1O88346 262 aa21.93■■□□□ 1.1
Usp48-201ENSMUST00000055131 Golga2Q921M4 999 aa21.93■■□□□ 1.1
Usp48-201ENSMUST00000055131 Cux2P70298 1426 aa21.92■■□□□ 1.1
Usp48-201ENSMUST00000055131 Anapc15P60007 132 aa21.91■■□□□ 1.1
Usp48-201ENSMUST00000055131 Fyco1Q8VDC1 1437 aa21.91■■□□□ 1.1
Usp48-201ENSMUST00000055131 Sart3Q9JLI8 962 aaKnown RBP21.91■■□□□ 1.1
Usp48-201ENSMUST00000055131 Mfap1aC0HKD8 439 aaKnown RBP21.89■■□□□ 1.09
Usp48-201ENSMUST00000055131 Mfap1bC0HKD9 439 aaKnown RBP21.89■■□□□ 1.09
Usp48-201ENSMUST00000055131 CrbnQ8C7D2 445 aa21.89■■□□□ 1.09
Usp48-201ENSMUST00000055131 Arhgap35Q91YM2 1499 aa21.88■■□□□ 1.09
Usp48-201ENSMUST00000055131 Q3TQI7 289 aaKnown RBP21.87■■□□□ 1.09
Usp48-201ENSMUST00000055131 Fmn1Q05860 1466 aa21.86■■□□□ 1.09
Usp48-201ENSMUST00000055131 Rock2P70336 1388 aa21.86■■□□□ 1.09
Usp48-201ENSMUST00000055131 AU015836B2RUM3 263 aa21.86■■□□□ 1.09
Usp48-201ENSMUST00000055131 Cecr2E9Q2Z1 1453 aa21.86■■□□□ 1.09
Usp48-201ENSMUST00000055131 Znf316Q6PGE4 1016 aa21.86■■□□□ 1.09
Usp48-201ENSMUST00000055131 Ipo9Q91YE6 1041 aa21.85■■□□□ 1.09
Usp48-201ENSMUST00000055131 Sox12Q04890 314 aa21.85■■□□□ 1.09
Usp48-201ENSMUST00000055131 Ipo8Q7TMY7 1010 aa21.84■■□□□ 1.09
Usp48-201ENSMUST00000055131 CgnP59242 1191 aa21.82■■□□□ 1.08
Usp48-201ENSMUST00000055131 Psme1P97371 249 aa21.82■■□□□ 1.08
Usp48-201ENSMUST00000055131 MlecQ6ZQI3 291 aaKnown RBP21.81■■□□□ 1.08
Usp48-201ENSMUST00000055131 Lemd3Q9WU40 921 aa21.81■■□□□ 1.08
Usp48-201ENSMUST00000055131 Iffo2Q8R2V2 512 aa21.81■■□□□ 1.08
Usp48-201ENSMUST00000055131 Baz1bQ9Z277 1479 aa21.81■■□□□ 1.08
Usp48-201ENSMUST00000055131 GorabQ8BRM2 368 aa21.8■■□□□ 1.08
Usp48-201ENSMUST00000055131 PtmsQ9D0J8 101 aaKnown RBP21.79■■□□□ 1.08
Usp48-201ENSMUST00000055131 Gm973E9Q295 1059 aa21.78■■□□□ 1.08
Usp48-201ENSMUST00000055131 Ksr2Q3UVC0 959 aa21.78■■□□□ 1.08
Usp48-201ENSMUST00000055131 Nup155Q99P88 1391 aaKnown RBP21.78■■□□□ 1.08
Usp48-201ENSMUST00000055131 Eif4g2Q62448 906 aaKnown RBP21.77■■□□□ 1.08
Usp48-201ENSMUST00000055131 Srcin1Q9QWI6 1250 aa21.77■■□□□ 1.08
Usp48-201ENSMUST00000055131 MecomP14404 1042 aa21.77■■□□□ 1.07
Usp48-201ENSMUST00000055131 CntlnA2AM05 1397 aa21.76■■□□□ 1.07
Usp48-201ENSMUST00000055131 Pibf1E9Q6K3 756 aa21.76■■□□□ 1.07
Usp48-201ENSMUST00000055131 Txndc2Q6P902 515 aa21.75■■□□□ 1.07
Usp48-201ENSMUST00000055131 Slc4a1apE9PX68 744 aa21.75■■□□□ 1.07
Usp48-201ENSMUST00000055131 Nol10Q5RJG1 687 aaKnown RBP21.75■■□□□ 1.07
Usp48-201ENSMUST00000055131 Phldb1Q6PDH0 1371 aaKnown RBP21.74■■□□□ 1.07
Usp48-201ENSMUST00000055131 Kif3bQ61771 747 aa21.74■■□□□ 1.07
Usp48-201ENSMUST00000055131 Q8BT18 775 aa21.73■■□□□ 1.07
Usp48-201ENSMUST00000055131 Ggt6Q6PDE7 497 aa21.72■■□□□ 1.07
Usp48-201ENSMUST00000055131 Spag9Q58A65 1321 aaKnown RBP21.72■■□□□ 1.07
Usp48-201ENSMUST00000055131 Pde3bQ61409 1100 aa21.71■■□□□ 1.07
Usp48-201ENSMUST00000055131 Tnnt2P50752 301 aa21.71■■□□□ 1.07
Usp48-201ENSMUST00000055131 CftrP26361 1476 aa21.7■■□□□ 1.06
Usp48-201ENSMUST00000055131 MsnP26041 577 aaKnown RBP21.7■■□□□ 1.06
Usp48-201ENSMUST00000055131 Ccar1Q8CH18 1146 aaKnown RBP21.7■■□□□ 1.06
Usp48-201ENSMUST00000055131 Brpf1B2RRD7 1212 aa21.69■■□□□ 1.06
Usp48-201ENSMUST00000055131 ChgaP26339 463 aaKnown RBP21.69■■□□□ 1.06
Usp48-201ENSMUST00000055131 CrebrfQ8CDG5 640 aaKnown RBP21.68■■□□□ 1.06
Usp48-201ENSMUST00000055131 Fan1Q69ZT1 1020 aa21.67■■□□□ 1.06
Usp48-201ENSMUST00000055131 Plekhh2Q8C115 1491 aa21.66■■□□□ 1.06
Usp48-201ENSMUST00000055131 Nolc1E9Q5C9 702 aaKnown RBP21.65■■□□□ 1.06
Usp48-201ENSMUST00000055131 Chmp3Q9CQ10 224 aa21.64■■□□□ 1.05
Usp48-201ENSMUST00000055131 Calcoco2A2A6M5 331 aa21.62■■□□□ 1.05
Usp48-201ENSMUST00000055131 ScribQ80U72 1612 aa21.62■■□□□ 1.05
Usp48-201ENSMUST00000055131 Pank3Q8R2W9 370 aa21.62■■□□□ 1.05
Usp48-201ENSMUST00000055131 Ccdc146E9Q9F7 977 aa21.61■■□□□ 1.05
Usp48-201ENSMUST00000055131 R3hcc1Q8BSI6 488 aa21.61■■□□□ 1.05
Usp48-201ENSMUST00000055131 SlkO54988 1233 aa21.61■■□□□ 1.05
Usp48-201ENSMUST00000055131 Atad2bE9Q166 1460 aaKnown RBP21.6■■□□□ 1.05
Usp48-201ENSMUST00000055131 Smarce1O54941 411 aaKnown RBP21.59■■□□□ 1.05
Usp48-201ENSMUST00000055131 Tsen2Q6P7W5 460 aa21.59■■□□□ 1.05
Usp48-201ENSMUST00000055131 Dhx57Q6P5D3 1388 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms