RNA–Protein interactions for RNA: ENSMUST00000049920.13

Ino80-201, Transcript of DNA helicase INO80, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ino80, Length 6,354 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ino80-201ENSMUST00000049920 Speer4f1Q9D5Q6 258 aa17.74■□□□□ 0.43
Ino80-201ENSMUST00000049920 Arid4aF8VPQ2 1261 aaKnown RBP17.74■□□□□ 0.43
Ino80-201ENSMUST00000049920 GorabQ8BRM2 368 aa17.74■□□□□ 0.43
Ino80-201ENSMUST00000049920 KnstrnQ9D9Z1 312 aaKnown RBP17.73■□□□□ 0.43
Ino80-201ENSMUST00000049920 Stk26Q99JT2 416 aa17.72■□□□□ 0.43
Ino80-201ENSMUST00000049920 Rwdd1Q9CQK7 243 aa17.72■□□□□ 0.43
Ino80-201ENSMUST00000049920 Iffo2Q8R2V2 512 aa17.7■□□□□ 0.42
Ino80-201ENSMUST00000049920 NudcO35685 332 aaKnown RBP17.7■□□□□ 0.42
Ino80-201ENSMUST00000049920 SlkO54988 1233 aa17.7■□□□□ 0.42
Ino80-201ENSMUST00000049920 Iqcf3Q9D498 203 aa17.7■□□□□ 0.42
Ino80-201ENSMUST00000049920 BccipQ9CWI3 316 aa17.7■□□□□ 0.42
Ino80-201ENSMUST00000049920 Noc3lQ8VI84 807 aaKnown RBP17.67■□□□□ 0.42
Ino80-201ENSMUST00000049920 Hspa5P20029 655 aaKnown RBP17.67■□□□□ 0.42
Ino80-201ENSMUST00000049920 Dnai1Q8C0M8 701 aa17.67■□□□□ 0.42
Ino80-201ENSMUST00000049920 Pibf1E9Q6K3 756 aa17.67■□□□□ 0.42
Ino80-201ENSMUST00000049920 ChgaP26339 463 aaKnown RBP17.66■□□□□ 0.42
Ino80-201ENSMUST00000049920 Ncbp3Q8BZR9 615 aaKnown RBP17.66■□□□□ 0.42
Ino80-201ENSMUST00000049920 Sox12Q04890 314 aa17.66■□□□□ 0.42
Ino80-201ENSMUST00000049920 Sin3aQ60520 1274 aaKnown RBP17.65■□□□□ 0.42
Ino80-201ENSMUST00000049920 Rtf1A2AQ19 715 aaKnown RBP17.64■□□□□ 0.41
Ino80-201ENSMUST00000049920 Ggt6Q6PDE7 497 aa17.64■□□□□ 0.41
Ino80-201ENSMUST00000049920 Chmp5Q9D7S9 219 aa17.64■□□□□ 0.41
Ino80-201ENSMUST00000049920 Calcoco2A2A6M5 331 aa17.64■□□□□ 0.41
Ino80-201ENSMUST00000049920 Tomm22Q9CPQ3 142 aa17.62■□□□□ 0.41
Ino80-201ENSMUST00000049920 Exoc6Q8R313 802 aa17.61■□□□□ 0.41
Ino80-201ENSMUST00000049920 Chmp4bQ9D8B3 224 aaKnown RBP17.61■□□□□ 0.41
Ino80-201ENSMUST00000049920 Gm973E9Q295 1059 aa17.61■□□□□ 0.41
Ino80-201ENSMUST00000049920 MecomP14404 1042 aa17.6■□□□□ 0.41
Ino80-201ENSMUST00000049920 Cwc22Q8C5N3 908 aaKnown RBP17.6■□□□□ 0.41
Ino80-201ENSMUST00000049920 Slc4a1apE9PX68 744 aa17.6■□□□□ 0.41
Ino80-201ENSMUST00000049920 Birc3O08863 600 aa17.6■□□□□ 0.41
Ino80-201ENSMUST00000049920 Brpf1B2RRD7 1212 aa17.59■□□□□ 0.41
Ino80-201ENSMUST00000049920 SetQ9EQU5 289 aaKnown RBP17.58■□□□□ 0.41
Ino80-201ENSMUST00000049920 Rundc1Q0VDN7 615 aa17.57■□□□□ 0.4
Ino80-201ENSMUST00000049920 CrbnQ8C7D2 445 aa17.57■□□□□ 0.4
Ino80-201ENSMUST00000049920 EspnQ9ET47 871 aa17.56■□□□□ 0.4
Ino80-201ENSMUST00000049920 Vps53Q8CCB4 832 aa17.56■□□□□ 0.4
Ino80-201ENSMUST00000049920 Ipo9Q91YE6 1041 aa17.56■□□□□ 0.4
Ino80-201ENSMUST00000049920 Q3TQI7 289 aaKnown RBP17.56■□□□□ 0.4
Ino80-201ENSMUST00000049920 Fam193aQ8CGI1 1231 aaKnown RBP17.56■□□□□ 0.4
Ino80-201ENSMUST00000049920 Tcerg1Q8CGF7 1100 aaKnown RBP17.55■□□□□ 0.4
Ino80-201ENSMUST00000049920 U2af1Q9D883 239 aaKnown RBP17.55■□□□□ 0.4
Ino80-201ENSMUST00000049920 HnrnpuQ8VEK3 800 aaKnown RBP17.55■□□□□ 0.4
Ino80-201ENSMUST00000049920 Mtus2Q3UHD3 1353 aa17.54■□□□□ 0.4
Ino80-201ENSMUST00000049920 Drc7Q6V3W6 876 aa17.54■□□□□ 0.4
Ino80-201ENSMUST00000049920 Chmp3Q9CQ10 224 aa17.53■□□□□ 0.4
Ino80-201ENSMUST00000049920 Trim30aP15533 496 aa17.53■□□□□ 0.4
Ino80-201ENSMUST00000049920 Ifit1bl1D3Z6F0 470 aa17.52■□□□□ 0.4
Ino80-201ENSMUST00000049920 Nol10Q5RJG1 687 aaKnown RBP17.52■□□□□ 0.4
Ino80-201ENSMUST00000049920 Ipo8Q7TMY7 1010 aa17.52■□□□□ 0.4
Ino80-201ENSMUST00000049920 Cald1E9QA15 768 aaKnown RBP17.52■□□□□ 0.4
Ino80-201ENSMUST00000049920 Tpm3-rs7D3Z2H9 248 aa17.52■□□□□ 0.39
Ino80-201ENSMUST00000049920 Rrp12Q6P5B0 1295 aaKnown RBP17.51■□□□□ 0.39
Ino80-201ENSMUST00000049920 RdxP26043 583 aaKnown RBP17.51■□□□□ 0.39
Ino80-201ENSMUST00000049920 Chmp4cQ9D7F7 232 aa17.49■□□□□ 0.39
Ino80-201ENSMUST00000049920 Sart3Q9JLI8 962 aaKnown RBP17.49■□□□□ 0.39
Ino80-201ENSMUST00000049920 Dcaf11Q91VU6 549 aa17.47■□□□□ 0.39
Ino80-201ENSMUST00000049920 Ccdc146E9Q9F7 977 aa17.46■□□□□ 0.39
Ino80-201ENSMUST00000049920 Wdr78E9PYY5 807 aa17.46■□□□□ 0.39
Ino80-201ENSMUST00000049920 Nolc1E9Q5C9 702 aaKnown RBP17.46■□□□□ 0.39
Ino80-201ENSMUST00000049920 Ftsj3Q9DBE9 838 aaKnown RBP17.46■□□□□ 0.39
Ino80-201ENSMUST00000049920 Tpd52l1O54818 204 aa17.46■□□□□ 0.38
Ino80-201ENSMUST00000049920 Mbd3Q9Z2D8 285 aaKnown RBP17.45■□□□□ 0.38
Ino80-201ENSMUST00000049920 Fnbp4Q6ZQ03 1031 aa17.44■□□□□ 0.38
Ino80-201ENSMUST00000049920 Polr3gQ6NXY9 223 aa17.44■□□□□ 0.38
Ino80-201ENSMUST00000049920 Hdgfl1Q2VPR5 283 aa17.44■□□□□ 0.38
Ino80-201ENSMUST00000049920 Rb1cc1Q9ESK9 1588 aa17.44■□□□□ 0.38
Ino80-201ENSMUST00000049920 Golga2Q921M4 999 aa17.43■□□□□ 0.38
Ino80-201ENSMUST00000049920 Ccer1Q9CQL2 403 aa17.43■□□□□ 0.38
Ino80-201ENSMUST00000049920 Ipo4Q8VI75 1082 aa17.43■□□□□ 0.38
Ino80-201ENSMUST00000049920 Kif15Q6P9L6 1387 aa17.43■□□□□ 0.38
Ino80-201ENSMUST00000049920 A0A0U1RNP2 1173 aa17.42■□□□□ 0.38
Ino80-201ENSMUST00000049920 Ksr2Q3UVC0 959 aa17.42■□□□□ 0.38
Ino80-201ENSMUST00000049920 Ppp1r18Q8BQ30 594 aa17.42■□□□□ 0.38
Ino80-201ENSMUST00000049920 Slc4a10Q5DTL9 1118 aa17.42■□□□□ 0.38
Ino80-201ENSMUST00000049920 R3hcc1Q8BSI6 488 aa17.41■□□□□ 0.38
Ino80-201ENSMUST00000049920 FosbP13346 338 aa17.41■□□□□ 0.38
Ino80-201ENSMUST00000049920 Tpm3P21107 285 aaKnown RBP17.41■□□□□ 0.38
Ino80-201ENSMUST00000049920 Fhad1A6PWD2 1420 aa17.4■□□□□ 0.38
Ino80-201ENSMUST00000049920 Eea1Q8BL66 1411 aa17.4■□□□□ 0.38
Ino80-201ENSMUST00000049920 Gtf3c3Q3TMP1 882 aa17.39■□□□□ 0.38
Ino80-201ENSMUST00000049920 Gtf2e1Q9D0D5 440 aa17.39■□□□□ 0.38
Ino80-201ENSMUST00000049920 Cc2d1aQ8K1A6 943 aa17.39■□□□□ 0.37
Ino80-201ENSMUST00000049920 Eif4g2Q62448 906 aaKnown RBP17.38■□□□□ 0.37
Ino80-201ENSMUST00000049920 Tmf1B9EKI3 1091 aa17.38■□□□□ 0.37
Ino80-201ENSMUST00000049920 Znf704Q9ERQ3 566 aa17.38■□□□□ 0.37
Ino80-201ENSMUST00000049920 Pkd2O35245 966 aa17.37■□□□□ 0.37
Ino80-201ENSMUST00000049920 Sf3a1Q8K4Z5 791 aaKnown RBP17.36■□□□□ 0.37
Ino80-201ENSMUST00000049920 Psme1P97371 249 aa17.36■□□□□ 0.37
Ino80-201ENSMUST00000049920 Map4P27546 1125 aaKnown RBP17.36■□□□□ 0.37
Ino80-201ENSMUST00000049920 Becn1O88597 448 aa17.35■□□□□ 0.37
Ino80-201ENSMUST00000049920 Ppm1fQ8CGA0 452 aa17.35■□□□□ 0.37
Ino80-201ENSMUST00000049920 Arid3cA6PWV5 409 aa17.34■□□□□ 0.37
Ino80-201ENSMUST00000049920 Rfx1P48377 963 aa17.34■□□□□ 0.37
Ino80-201ENSMUST00000049920 PtmsQ9D0J8 101 aaKnown RBP17.34■□□□□ 0.37
Ino80-201ENSMUST00000049920 VgfQ0VGU4 617 aa17.34■□□□□ 0.37
Ino80-201ENSMUST00000049920 Kri1Q8VDQ9 704 aaKnown RBP17.34■□□□□ 0.37
Ino80-201ENSMUST00000049920 Fbxo2Q80UW2 297 aa17.33■□□□□ 0.36
Ino80-201ENSMUST00000049920 Rsph6aQ8CDR2 708 aa17.33■□□□□ 0.36
Ino80-201ENSMUST00000049920 Utp3Q9JI13 469 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms