RNA–Protein interactions for RNA: YDR297W

SUR2, Transcript of Sphinganine C4-hydroxylase, yeast

Gene SUR2, Length 1,050 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUR2	YDR297W	KAP120	Q02932	1032 aa		4.79	□□□□□ -1.64
SUR2	YDR297W	HOS3	Q02959	697 aa	Known RBP	4.79	□□□□□ -1.64
SUR2	YDR297W	CWC2	Q12046	339 aa	Predicted RBP	4.79	□□□□□ -1.64
SUR2	YDR297W	ATG29	Q12092	213 aa		4.79	□□□□□ -1.64
SUR2	YDR297W	CHS5	Q12114	671 aa	Known RBP	4.79	□□□□□ -1.64
SUR2	YDR297W	ACF2	Q12168	779 aa		4.79	□□□□□ -1.64
SUR2	YDR297W	TY1A-DR3	Q12441	440 aa		4.79	□□□□□ -1.64
SUR2	YDR297W	PAR32	Q12515	295 aa	Known RBP	4.79	□□□□□ -1.64
SUR2	YDR297W	ILV1	P00927	576 aa	Known RBP	4.78	□□□□□ -1.64
SUR2	YDR297W	BI4	P03879	638 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	CDC37	P06101	506 aa	Known RBP	4.78	□□□□□ -1.64
SUR2	YDR297W	SEC53	P07283	254 aa	Known RBP	4.78	□□□□□ -1.64
SUR2	YDR297W	DSF1	P0CX08	502 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	YNR073C	P0CX09	502 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	YEL076C-A	P0CX16	216 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	YLR464W	P0CX17	216 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	KRS1	P15180	591 aa	Known RBP	4.78	□□□□□ -1.64
SUR2	YDR297W	THR1	P17423	357 aa	Known RBP	4.78	□□□□□ -1.64
SUR2	YDR297W	DPB2	P24482	689 aa	Predicted RBP	4.78	□□□□□ -1.64
SUR2	YDR297W	CYS3	P31373	394 aa	Known RBP	4.78	□□□□□ -1.64
SUR2	YDR297W	SLA2	P33338	968 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	UTP11	P34247	250 aa	Predicted RBP	4.78	□□□□□ -1.64
SUR2	YDR297W	YET1	P35723	206 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	TFA2	P36145	328 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	TCD1	P38756	429 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	YHR054C	P38780	354 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	NDT80	P38830	627 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	SAK1	P38990	1142 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	YEL076C	P39971	216 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	LOH1	P47055	219 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	UBC9	P50623	157 aa	Predicted RBP	4.78	□□□□□ -1.64
SUR2	YDR297W	PAN2	P53010	1115 aa	Predicted RBP	4.78	□□□□□ -1.64
SUR2	YDR297W	TAD1	P53065	400 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	PCL10	P53124	433 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	YAP1802	P53309	568 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	TNA1	P53322	534 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	KTR6	P54070	446 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	YML037C	Q03703	340 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	KRE28	Q04431	385 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	SPC24	Q04477	213 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	DYN3	Q04949	312 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	RSA3	Q05942	220 aa	Known RBP	4.78	□□□□□ -1.64
SUR2	YDR297W	ADY4	Q05955	493 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	BOP2	Q06150	570 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	YLR455W	Q06188	304 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	ECM7	Q06200	448 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	GMC2	Q06201	188 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	GRS2	Q06817	618 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	TLG2	Q08144	397 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	YAP7	Q08182	245 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	DIN7	Q12086	430 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	NSI1	Q12457	570 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	SKS1	Q12505	502 aa		4.78	□□□□□ -1.64
SUR2	YDR297W	TDH1	P00360	332 aa	Known RBP	4.77	□□□□□ -1.65
SUR2	YDR297W	CDC19	P00549	500 aa	Known RBP	4.77	□□□□□ -1.65
SUR2	YDR297W	SNF1	P06782	633 aa	Known RBP	4.77	□□□□□ -1.65
SUR2	YDR297W	HSF1	P10961	833 aa		4.77	□□□□□ -1.65
SUR2	YDR297W	NCP1	P16603	691 aa	Known RBP	4.77	□□□□□ -1.65
SUR2	YDR297W	FUS3	P16892	353 aa	Known RBP	4.77	□□□□□ -1.65
SUR2	YDR297W	RPI1	P23250	407 aa	Known RBP	4.77	□□□□□ -1.65
SUR2	YDR297W	MIH1	P23748	554 aa		4.77	□□□□□ -1.65
SUR2	YDR297W	MNE1	P24720	663 aa		4.77	□□□□□ -1.65
SUR2	YDR297W	DBP2	P24783	546 aa	Known RBP	4.77	□□□□□ -1.65
SUR2	YDR297W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
SUR2	YDR297W	GYP6	P32806	458 aa		4.77	□□□□□ -1.65
SUR2	YDR297W	SUR1	P33300	382 aa		4.77	□□□□□ -1.65
SUR2	YDR297W	GND1	P38720	489 aa	Known RBP	4.77	□□□□□ -1.65
SUR2	YDR297W	ACO2	P39533	789 aa		4.77	□□□□□ -1.65
SUR2	YDR297W	THO1	P40040	218 aa	Known RBP	4.77	□□□□□ -1.65
SUR2	YDR297W	LSM5	P40089	93 aa	Known RBP	4.77	□□□□□ -1.65
SUR2	YDR297W	NOP9	P47077	666 aa	Known RBP	4.77	□□□□□ -1.65
SUR2	YDR297W	COX16	P47081	118 aa		4.77	□□□□□ -1.65
SUR2	YDR297W	PSP2	P50109	593 aa	Known RBP	4.77	□□□□□ -1.65
SUR2	YDR297W	FMS1	P50264	508 aa		4.77	□□□□□ -1.65
SUR2	YDR297W	MNT2	P53059	558 aa		4.77	□□□□□ -1.65
SUR2	YDR297W	LCL3	P53153	274 aa		4.77	□□□□□ -1.65
SUR2	YDR297W	CAF130	P53280	1122 aa	Predicted RBP	4.77	□□□□□ -1.65
SUR2	YDR297W	ARC35	P53731	342 aa	Known RBP	4.77	□□□□□ -1.65
SUR2	YDR297W	EOS1	P53938	366 aa		4.77	□□□□□ -1.65
SUR2	YDR297W	EBS1	Q03466	884 aa	Known RBP	4.77	□□□□□ -1.65
SUR2	YDR297W	ARP10	Q04549	284 aa		4.77	□□□□□ -1.65
SUR2	YDR297W	UTP21	Q06078	939 aa	Predicted RBP	4.77	□□□□□ -1.65
SUR2	YDR297W	OMS1	Q06668	471 aa		4.77	□□□□□ -1.65
SUR2	YDR297W	IWR1	Q07532	353 aa	Predicted RBP	4.77	□□□□□ -1.65
SUR2	YDR297W	YPL216W	Q08964	1102 aa		4.77	□□□□□ -1.65
SUR2	YDR297W	FMP40	Q08968	688 aa	Predicted RBP	4.77	□□□□□ -1.65
SUR2	YDR297W	RBD2	Q12270	262 aa		4.77	□□□□□ -1.65
SUR2	YDR297W	YBR182C-A	Q8TGU6	64 aa		4.77	□□□□□ -1.65
SUR2	YDR297W	HIS3	P06633	220 aa		4.76	□□□□□ -1.65
SUR2	YDR297W	YML002W	P0CF17	737 aa		4.76	□□□□□ -1.65
SUR2	YDR297W	SAC7	P17121	654 aa		4.76	□□□□□ -1.65
SUR2	YDR297W	SPO11	P23179	398 aa		4.76	□□□□□ -1.65
SUR2	YDR297W	SEC14	P24280	304 aa	Known RBP	4.76	□□□□□ -1.65
SUR2	YDR297W	YCR016W	P25617	290 aa	Known RBP	4.76	□□□□□ -1.65
SUR2	YDR297W	ZIP1	P31111	875 aa		4.76	□□□□□ -1.65
SUR2	YDR297W	MSN4	P33749	630 aa		4.76	□□□□□ -1.65
SUR2	YDR297W	HCS1	P34243	683 aa		4.76	□□□□□ -1.65
SUR2	YDR297W	YKR015C	P36111	568 aa		4.76	□□□□□ -1.65
SUR2	YDR297W	CAF4	P36130	643 aa		4.76	□□□□□ -1.65
SUR2	YDR297W	PPS1	P38148	807 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms