RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W GRX8Q05926 109 aa3.96□□□□□ -1.78
SSL1YLR005W SPO75Q07798 868 aa3.96□□□□□ -1.78
SSL1YLR005W YLR040CQ07988 224 aa3.96□□□□□ -1.78
SSL1YLR005W AFT2Q08957 416 aa3.96□□□□□ -1.78
SSL1YLR005W YPR071WQ12346 211 aa3.96□□□□□ -1.78
SSL1YLR005W VPS5Q92331 675 aa3.96□□□□□ -1.78
SSL1YLR005W MEC1P38111 2368 aa3.96□□□□□ -1.78
SSL1YLR005W UBR1P19812 1950 aa3.96□□□□□ -1.78
SSL1YLR005W GPA1P08539 472 aa3.95□□□□□ -1.78
SSL1YLR005W GEX1P25596 615 aa3.95□□□□□ -1.78
SSL1YLR005W GEX2P36173 615 aa3.95□□□□□ -1.78
SSL1YLR005W APM3P38153 483 aa3.95□□□□□ -1.78
SSL1YLR005W URA8P38627 578 aaPredicted RBP3.95□□□□□ -1.78
SSL1YLR005W SRP68P38687 599 aaKnown RBP3.95□□□□□ -1.78
SSL1YLR005W TOK1P40310 691 aa3.95□□□□□ -1.78
SSL1YLR005W YIL108WP40483 696 aaKnown RBP3.95□□□□□ -1.78
SSL1YLR005W SER33P40510 469 aa3.95□□□□□ -1.78
SSL1YLR005W YPS6P40583 537 aa3.95□□□□□ -1.78
SSL1YLR005W CEP3P40969 608 aa3.95□□□□□ -1.78
SSL1YLR005W ASG7P46993 209 aa3.95□□□□□ -1.78
SSL1YLR005W PUS2P53167 370 aa3.95□□□□□ -1.78
SSL1YLR005W RNH70P53331 553 aa3.95□□□□□ -1.78
SSL1YLR005W TRM112P53738 135 aaPredicted RBP3.95□□□□□ -1.78
SSL1YLR005W YNL144CP53907 740 aa3.95□□□□□ -1.78
SSL1YLR005W KTR6P54070 446 aa3.95□□□□□ -1.78
SSL1YLR005W SLU7Q02775 382 aaKnown RBP3.95□□□□□ -1.78
SSL1YLR005W TRM82Q03774 444 aa3.95□□□□□ -1.78
SSL1YLR005W SND1Q04007 877 aa3.95□□□□□ -1.78
SSL1YLR005W SXM1Q04175 944 aaKnown RBP3.95□□□□□ -1.78
SSL1YLR005W YLR456WQ06199 204 aa3.95□□□□□ -1.78
SSL1YLR005W YPR078CQ06813 372 aa3.95□□□□□ -1.78
SSL1YLR005W SAM4Q08985 325 aaKnown RBP3.95□□□□□ -1.78
SSL1YLR005W PER33Q12144 273 aa3.95□□□□□ -1.78
SSL1YLR005W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
SSL1YLR005W LSP1Q12230 341 aaKnown RBP3.95□□□□□ -1.78
SSL1YLR005W YLR046CQ12253 270 aa3.95□□□□□ -1.78
SSL1YLR005W PAB1P04147 577 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
SSL1YLR005W PCT1P13259 424 aa3.94□□□□□ -1.78
SSL1YLR005W SEC63P14906 663 aa3.94□□□□□ -1.78
SSL1YLR005W MET16P18408 261 aaPredicted RBP3.94□□□□□ -1.78
SSL1YLR005W RFA1P22336 621 aaKnown RBP3.94□□□□□ -1.78
SSL1YLR005W PPG1P32838 368 aa3.94□□□□□ -1.78
SSL1YLR005W NIP100P33420 868 aa3.94□□□□□ -1.78
SSL1YLR005W PMT1P33775 817 aa3.94□□□□□ -1.78
SSL1YLR005W CBR1P38626 284 aaKnown RBP3.94□□□□□ -1.78
SSL1YLR005W TDA3P38758 523 aa3.94□□□□□ -1.78
SSL1YLR005W FSH1P38777 243 aaKnown RBP3.94□□□□□ -1.78
SSL1YLR005W STL1P39932 569 aa3.94□□□□□ -1.78
SSL1YLR005W SIT1P39980 628 aa3.94□□□□□ -1.78
SSL1YLR005W EDC3P39998 551 aaKnown RBP3.94□□□□□ -1.78
SSL1YLR005W LTP1P40347 161 aa3.94□□□□□ -1.78
SSL1YLR005W ALR2P43553 858 aa3.94□□□□□ -1.78
SSL1YLR005W YJL132WP47014 750 aa3.94□□□□□ -1.78
SSL1YLR005W VMS1Q04311 632 aaKnown RBP3.94□□□□□ -1.78
SSL1YLR005W BNA5Q05979 453 aa3.94□□□□□ -1.78
SSL1YLR005W YFT2Q06676 274 aa3.94□□□□□ -1.78
SSL1YLR005W PEX15Q08215 383 aa3.94□□□□□ -1.78
SSL1YLR005W YOL073CQ08232 322 aa3.94□□□□□ -1.78
SSL1YLR005W GUP2Q08929 609 aa3.94□□□□□ -1.78
SSL1YLR005W SRO7Q12038 1033 aa3.94□□□□□ -1.78
SSL1YLR005W SFI1Q12369 946 aa3.94□□□□□ -1.78
SSL1YLR005W TRM13Q12383 476 aa3.94□□□□□ -1.78
SSL1YLR005W EMP46Q12396 444 aa3.94□□□□□ -1.78
SSL1YLR005W SUC2P00724 532 aa3.93□□□□□ -1.78
SSL1YLR005W SPT15P13393 240 aaKnown RBP3.93□□□□□ -1.78
SSL1YLR005W BRF1P29056 596 aa3.93□□□□□ -1.78
SSL1YLR005W RPC25P35718 212 aa3.93□□□□□ -1.78
SSL1YLR005W TRZ1P36159 838 aaPredicted RBP3.93□□□□□ -1.78
SSL1YLR005W MOH1P38191 138 aa3.93□□□□□ -1.78
SSL1YLR005W YHL041WP38730 149 aa3.93□□□□□ -1.78
SSL1YLR005W AIM14P53109 570 aa3.93□□□□□ -1.78
SSL1YLR005W YNL247WP53852 767 aaKnown RBP3.93□□□□□ -1.78
SSL1YLR005W CSL4P53859 292 aaPredicted RBP3.93□□□□□ -1.78
SSL1YLR005W PIR1Q03178 341 aa3.93□□□□□ -1.78
SSL1YLR005W RPN4Q03465 531 aa3.93□□□□□ -1.78
SSL1YLR005W GIS1Q03833 894 aa3.93□□□□□ -1.78
SSL1YLR005W KAP95Q06142 861 aaKnown RBP3.93□□□□□ -1.78
SSL1YLR005W THI73Q07904 523 aa3.93□□□□□ -1.78
SSL1YLR005W THI21Q08975 551 aa3.93□□□□□ -1.78
SSL1YLR005W PEX11Q12462 236 aa3.93□□□□□ -1.78
SSL1YLR005W NAG1Q8TGN9 163 aa3.93□□□□□ -1.78
SSL1YLR005W GAL4P04386 881 aa3.92□□□□□ -1.78
SSL1YLR005W SST2P11972 698 aaKnown RBP3.92□□□□□ -1.78
SSL1YLR005W GFA1P14742 717 aaKnown RBP3.92□□□□□ -1.78
SSL1YLR005W STE4P18851 423 aa3.92□□□□□ -1.78
SSL1YLR005W MRPL8P22353 238 aa3.92□□□□□ -1.78
SSL1YLR005W MNE1P24720 663 aa3.92□□□□□ -1.78
SSL1YLR005W ERG4P25340 473 aa3.92□□□□□ -1.78
SSL1YLR005W SPC110P32380 944 aa3.92□□□□□ -1.78
SSL1YLR005W GYP6P32806 458 aa3.92□□□□□ -1.78
SSL1YLR005W SPC42P36094 363 aa3.92□□□□□ -1.78
SSL1YLR005W RRP3P38712 501 aaKnown RBP3.92□□□□□ -1.78
SSL1YLR005W YER189WP40104 122 aa3.92□□□□□ -1.78
SSL1YLR005W SNG1P46950 547 aa3.92□□□□□ -1.78
SSL1YLR005W MNN11P46985 422 aaKnown RBP3.92□□□□□ -1.78
SSL1YLR005W TCB2P48231 1178 aa3.92□□□□□ -1.78
SSL1YLR005W COG7P53195 279 aa3.92□□□□□ -1.78
SSL1YLR005W NRM1P53718 249 aa3.92□□□□□ -1.78
SSL1YLR005W YMR178WQ03219 274 aaKnown RBP3.92□□□□□ -1.78
SSL1YLR005W PPN1Q04119 674 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms