RNA–Protein interactions for RNA: YPL275W

FDH2, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH2, Length 711 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH2	YPL275W	LCB4	Q12246	624 aa		4.22	□□□□□ -1.73
FDH2	YPL275W	GAL1	P04385	528 aa		4.21	□□□□□ -1.74
FDH2	YPL275W	MSS18	P08593	268 aa		4.21	□□□□□ -1.74
FDH2	YPL275W	KGD2	P19262	463 aa	Predicted RBP	4.21	□□□□□ -1.74
FDH2	YPL275W	RPS7A	P26786	190 aa	Known RBP	4.21	□□□□□ -1.74
FDH2	YPL275W	STT3	P39007	718 aa	Known RBP	4.21	□□□□□ -1.74
FDH2	YPL275W	QRI7	P43122	407 aa		4.21	□□□□□ -1.74
FDH2	YPL275W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
FDH2	YPL275W	MDG1	P53885	366 aa		4.21	□□□□□ -1.74
FDH2	YPL275W	YML119W	Q03208	357 aa		4.21	□□□□□ -1.74
FDH2	YPL275W	RAD33	Q04231	177 aa		4.21	□□□□□ -1.74
FDH2	YPL275W	HRD3	Q05787	833 aa		4.21	□□□□□ -1.74
FDH2	YPL275W	FAS2	P19097	1887 aa	Known RBP	4.2	□□□□□ -1.74
FDH2	YPL275W	LPD1	P09624	499 aa	Known RBP	4.2	□□□□□ -1.74
FDH2	YPL275W	ARO9	P38840	513 aa	Predicted RBP	4.2	□□□□□ -1.74
FDH2	YPL275W	ARB1	P40024	610 aa	Known RBP	4.2	□□□□□ -1.74
FDH2	YPL275W	SAE2	P46946	345 aa		4.2	□□□□□ -1.74
FDH2	YPL275W	YJL043W	P47053	257 aa		4.2	□□□□□ -1.74
FDH2	YPL275W	PIL1	P53252	339 aa	Known RBP	4.2	□□□□□ -1.74
FDH2	YPL275W	TEP1	P53916	434 aa		4.2	□□□□□ -1.74
FDH2	YPL275W	ERO1	Q03103	563 aa		4.2	□□□□□ -1.74
FDH2	YPL275W	BSP1	Q06604	576 aa		4.2	□□□□□ -1.74
FDH2	YPL275W	IRC3	Q06683	689 aa		4.2	□□□□□ -1.74
FDH2	YPL275W	CYK3	Q07533	885 aa		4.2	□□□□□ -1.74
FDH2	YPL275W	RLP24	Q07915	199 aa	Known RBP	4.2	□□□□□ -1.74
FDH2	YPL275W	FRE7	Q12333	620 aa		4.2	□□□□□ -1.74
FDH2	YPL275W	UTP10	P42945	1769 aa	Known RBP	4.19	□□□□□ -1.74
FDH2	YPL275W	AUS1	Q08409	1394 aa		4.19	□□□□□ -1.74
FDH2	YPL275W	PET111	P08468	800 aa		4.19	□□□□□ -1.74
FDH2	YPL275W	MDM10	P18409	493 aa		4.19	□□□□□ -1.74
FDH2	YPL275W	SIR1	P21691	654 aa		4.19	□□□□□ -1.74
FDH2	YPL275W	RRP43	P25359	394 aa	Predicted RBP	4.19	□□□□□ -1.74
FDH2	YPL275W	PTP2	P29461	750 aa		4.19	□□□□□ -1.74
FDH2	YPL275W	MRPL9	P31334	269 aa		4.19	□□□□□ -1.74
FDH2	YPL275W	APD1	P38281	316 aa		4.19	□□□□□ -1.74
FDH2	YPL275W	MAM1	P40065	302 aa		4.19	□□□□□ -1.74
FDH2	YPL275W	LTP1	P40347	161 aa		4.19	□□□□□ -1.74
FDH2	YPL275W	YIL089W	P40500	205 aa		4.19	□□□□□ -1.74
FDH2	YPL275W	ESF2	P53743	316 aa	Known RBP	4.19	□□□□□ -1.74
FDH2	YPL275W	VPS64	Q03944	604 aa		4.19	□□□□□ -1.74
FDH2	YPL275W	AIM6	Q07716	390 aa		4.19	□□□□□ -1.74
FDH2	YPL275W	RDL1	Q12305	139 aa	Known RBP	4.19	□□□□□ -1.74
FDH2	YPL275W	AHA1	Q12449	350 aa	Known RBP	4.19	□□□□□ -1.74
FDH2	YPL275W	YLR111W	Q12528	110 aa		4.19	□□□□□ -1.74
FDH2	YPL275W	MLP1	Q02455	1875 aa	Known RBP	4.19	□□□□□ -1.74
FDH2	YPL275W	PMD1	P32634	1753 aa		4.19	□□□□□ -1.74
FDH2	YPL275W	FIG2	P25653	1609 aa		4.18	□□□□□ -1.74
FDH2	YPL275W	APN1	P22936	367 aa		4.18	□□□□□ -1.74
FDH2	YPL275W	SPC72	P39723	622 aa		4.18	□□□□□ -1.74
FDH2	YPL275W	ATG36	P46983	293 aa		4.18	□□□□□ -1.74
FDH2	YPL275W	BNA3	P47039	444 aa	Known RBP	4.18	□□□□□ -1.74
FDH2	YPL275W	BPL1	P48445	690 aa	Predicted RBP	4.18	□□□□□ -1.74
FDH2	YPL275W	MOT3	P54785	490 aa	Known RBP	4.18	□□□□□ -1.74
FDH2	YPL275W	RMT2	Q03305	412 aa		4.18	□□□□□ -1.74
FDH2	YPL275W	RRP6	Q12149	733 aa	Known RBP	4.18	□□□□□ -1.74
FDH2	YPL275W	GRX6	Q12438	231 aa		4.18	□□□□□ -1.74
FDH2	YPL275W	BIK1	P11709	440 aa		4.17	□□□□□ -1.74
FDH2	YPL275W	MSM1	P22438	575 aa		4.17	□□□□□ -1.74
FDH2	YPL275W	MCM3	P24279	971 aa	Known RBP	4.17	□□□□□ -1.74
FDH2	YPL275W	HSP104	P31539	908 aa	Known RBP	4.17	□□□□□ -1.74
FDH2	YPL275W	LAS21	P40367	830 aa		4.17	□□□□□ -1.74
FDH2	YPL275W	COG2	P53271	262 aa		4.17	□□□□□ -1.74
FDH2	YPL275W	CPR6	P53691	371 aa	Known RBP	4.17	□□□□□ -1.74
FDH2	YPL275W	UBP16	Q02863	499 aa		4.17	□□□□□ -1.74
FDH2	YPL275W	CRF1	Q04930	467 aa		4.17	□□□□□ -1.74
FDH2	YPL275W	RAD34	Q06665	692 aa		4.17	□□□□□ -1.74
FDH2	YPL275W	HIM1	Q06674	414 aa		4.17	□□□□□ -1.74
FDH2	YPL275W	YDL242W	Q07746	117 aa		4.17	□□□□□ -1.74
FDH2	YPL275W	YOL057W	Q08225	711 aa		4.17	□□□□□ -1.74
FDH2	YPL275W	YER175W-A	Q8TGU4	54 aa		4.17	□□□□□ -1.74
FDH2	YPL275W	PIF1	P07271	859 aa		4.16	□□□□□ -1.74
FDH2	YPL275W	NUP1	P20676	1076 aa		4.16	□□□□□ -1.74
FDH2	YPL275W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
FDH2	YPL275W	APM3	P38153	483 aa		4.16	□□□□□ -1.74
FDH2	YPL275W	HIS6	P40545	261 aa		4.16	□□□□□ -1.74
FDH2	YPL275W	IMA1	P53051	589 aa		4.16	□□□□□ -1.74
FDH2	YPL275W	TLG1	Q03322	224 aa		4.16	□□□□□ -1.74
FDH2	YPL275W	TAP42	Q04372	366 aa		4.16	□□□□□ -1.74
FDH2	YPL275W	ICL2	Q12031	575 aa		4.16	□□□□□ -1.74
FDH2	YPL275W	YBR255C-A	Q3E776	120 aa		4.16	□□□□□ -1.74
FDH2	YPL275W	SES1	P07284	462 aa	Known RBP	4.15	□□□□□ -1.75
FDH2	YPL275W	MAK32	P23060	363 aa		4.15	□□□□□ -1.75
FDH2	YPL275W	SPC110	P32380	944 aa		4.15	□□□□□ -1.75
FDH2	YPL275W	KES1	P35844	434 aa	Known RBP	4.15	□□□□□ -1.75
FDH2	YPL275W	ERC1	P38767	581 aa		4.15	□□□□□ -1.75
FDH2	YPL275W	SAP1	P39955	897 aa	Known RBP	4.15	□□□□□ -1.75
FDH2	YPL275W	ULP2	P40537	1034 aa	Predicted RBP	4.15	□□□□□ -1.75
FDH2	YPL275W	MPP10	P47083	593 aa	Known RBP	4.15	□□□□□ -1.75
FDH2	YPL275W	ATP23	P53722	227 aa		4.15	□□□□□ -1.75
FDH2	YPL275W	DIB1	Q06819	143 aa	Predicted RBP	4.15	□□□□□ -1.75
FDH2	YPL275W	IWR1	Q07532	353 aa	Predicted RBP	4.15	□□□□□ -1.75
FDH2	YPL275W	BEM3	P32873	1128 aa		4.14	□□□□□ -1.75
FDH2	YPL275W	YHL041W	P38730	149 aa		4.14	□□□□□ -1.75
FDH2	YPL275W	CIR1	P42940	261 aa		4.14	□□□□□ -1.75
FDH2	YPL275W	NMD5	P46970	1048 aa		4.14	□□□□□ -1.75
FDH2	YPL275W	DSD1	P53095	428 aa		4.14	□□□□□ -1.75
FDH2	YPL275W	YGL082W	P53155	381 aa		4.14	□□□□□ -1.75
FDH2	YPL275W	PLM2	Q04383	521 aa		4.14	□□□□□ -1.75
FDH2	YPL275W	CET1	O13297	549 aa	Predicted RBP	4.13	□□□□□ -1.75
FDH2	YPL275W	CLC1	P17891	233 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms