RNA–Protein interactions for RNA: YPL275W

FDH2, Transcript of NAD(+)-dependent formate dehydrogenase, yeastyeast

Gene FDH2, Length 711 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FDH2YPL275W MTC1P47018 478 aaKnown RBP13.51□□□□□ -0.25
FDH2YPL275W DRS1P32892 752 aaKnown RBP12.99□□□□□ -0.33
FDH2YPL275W FAP1P53971 965 aa11.65□□□□□ -0.54
FDH2YPL275W DIP2Q12220 943 aaPredicted RBP11.24□□□□□ -0.61
FDH2YPL275W PRI1P10363 409 aa11.17□□□□□ -0.62
FDH2YPL275W BFR2Q06631 534 aaKnown RBP11.07□□□□□ -0.64
FDH2YPL275W ISW2Q08773 1120 aa11.04□□□□□ -0.64
FDH2YPL275W AAD16Q02895 342 aa11.02□□□□□ -0.65
FDH2YPL275W AVT3P36062 692 aa11□□□□□ -0.65
FDH2YPL275W RPG1P38249 964 aaKnown RBP10.97□□□□□ -0.65
FDH2YPL275W PRY3P47033 881 aa10.96□□□□□ -0.65
FDH2YPL275W RSE1Q04693 1361 aaKnown RBP10.75□□□□□ -0.69
FDH2YPL275W TSR3Q12094 313 aaKnown RBP10.6□□□□□ -0.71
FDH2YPL275W YCK3P39962 524 aa10.51□□□□□ -0.73
FDH2YPL275W RPL17AP05740 184 aaKnown RBP10.41□□□□□ -0.74
FDH2YPL275W RPL17BP46990 184 aaKnown RBP10.41□□□□□ -0.74
FDH2YPL275W TFA1P36100 482 aa10.33□□□□□ -0.76
FDH2YPL275W REB1P21538 810 aa10.28□□□□□ -0.76
FDH2YPL275W HAA1Q12753 694 aaKnown RBP10.27□□□□□ -0.77
FDH2YPL275W MRPL32P25348 183 aa10.11□□□□□ -0.79
FDH2YPL275W SPT21P35209 758 aa10.04□□□□□ -0.8
FDH2YPL275W YKR023WP36119 530 aaKnown RBP9.84□□□□□ -0.83
FDH2YPL275W CDC27P38042 758 aa9.77□□□□□ -0.85
FDH2YPL275W RIM101P33400 625 aa9.75□□□□□ -0.85
FDH2YPL275W HOP09932 586 aa9.61□□□□□ -0.87
FDH2YPL275W TFC8Q12308 588 aa9.61□□□□□ -0.87
FDH2YPL275W DCD1P06773 312 aa9.58□□□□□ -0.88
FDH2YPL275W YGL015CP33199 130 aa9.57□□□□□ -0.88
FDH2YPL275W OXP1P28273 1286 aa9.48□□□□□ -0.89
FDH2YPL275W MAP2P38174 421 aaKnown RBP9.39□□□□□ -0.91
FDH2YPL275W UBP10P53874 792 aaPredicted RBP9.37□□□□□ -0.91
FDH2YPL275W BCH2P36122 765 aa9.31□□□□□ -0.92
FDH2YPL275W SCY1P53009 804 aa9.25□□□□□ -0.93
FDH2YPL275W YIL055CP40523 627 aaKnown RBP9.21□□□□□ -0.94
FDH2YPL275W PTP3P40048 928 aa9.2□□□□□ -0.94
FDH2YPL275W YAH1Q12184 172 aaKnown RBP9.19□□□□□ -0.94
FDH2YPL275W RSM7P47150 247 aa9.13□□□□□ -0.95
FDH2YPL275W EPS1P40557 701 aa9.1□□□□□ -0.95
FDH2YPL275W YLR271WQ06152 274 aa9.09□□□□□ -0.95
FDH2YPL275W SLX5P32828 619 aaKnown RBP9.08□□□□□ -0.96
FDH2YPL275W SSP1P38871 571 aa9.06□□□□□ -0.96
FDH2YPL275W BDF1P35817 686 aa9.05□□□□□ -0.96
FDH2YPL275W AI2P03876 854 aa9.02□□□□□ -0.97
FDH2YPL275W BBC1P47068 1157 aa8.94□□□□□ -0.98
FDH2YPL275W TIF4632P39936 914 aaKnown RBP8.93□□□□□ -0.98
FDH2YPL275W TGL3P40308 642 aa8.92□□□□□ -0.98
FDH2YPL275W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.91□□□□□ -0.98not detected
FDH2YPL275W PSD2P53037 1138 aaKnown RBP8.9□□□□□ -0.98
FDH2YPL275W CST9Q06032 482 aa8.8□□□□□ -1
FDH2YPL275W MGA2P40578 1113 aa8.77□□□□□ -1.01
FDH2YPL275W MRM1P25270 412 aa8.72□□□□□ -1.01
FDH2YPL275W NSR1P27476 414 aaKnown RBP RIP-Chip data8.67□□□□□ -1.02not detected
FDH2YPL275W BUD31P25337 157 aaPredicted RBP8.63□□□□□ -1.03
FDH2YPL275W MST1P07236 462 aa8.62□□□□□ -1.03
FDH2YPL275W YAP5P40574 245 aa8.58□□□□□ -1.04
FDH2YPL275W YOR238WQ08634 303 aa8.58□□□□□ -1.04
FDH2YPL275W RCR1P38212 213 aa8.57□□□□□ -1.04
FDH2YPL275W VPS29P38759 282 aa8.55□□□□□ -1.04
FDH2YPL275W RTG3P38165 486 aa8.53□□□□□ -1.04
FDH2YPL275W PIB1Q06651 286 aa8.49□□□□□ -1.05
FDH2YPL275W UBP9P39967 754 aa8.47□□□□□ -1.05
FDH2YPL275W STS1P38637 319 aa8.45□□□□□ -1.06
FDH2YPL275W YMR1P47147 688 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06not detected
FDH2YPL275W YFR006WP43590 535 aa8.44□□□□□ -1.06
FDH2YPL275W DBP1P24784 617 aaKnown RBP8.43□□□□□ -1.06
FDH2YPL275W YBL029C-AQ3E756 94 aa8.42□□□□□ -1.06
FDH2YPL275W RAM2P29703 316 aa8.41□□□□□ -1.06
FDH2YPL275W RQC2Q12532 1038 aaKnown RBP8.38□□□□□ -1.07
FDH2YPL275W DMA1P38823 416 aa8.35□□□□□ -1.07
FDH2YPL275W GTT3P39996 337 aa8.35□□□□□ -1.07
FDH2YPL275W VNX1P42839 908 aa8.35□□□□□ -1.07
FDH2YPL275W WSC3Q12215 556 aa8.35□□□□□ -1.07
FDH2YPL275W VMA1P17255 1071 aaKnown RBP8.31□□□□□ -1.08
FDH2YPL275W MAK11P20484 414 aaKnown RBP8.29□□□□□ -1.08
FDH2YPL275W SAM3Q08986 587 aa8.25□□□□□ -1.09
FDH2YPL275W SPP1Q03012 353 aa8.24□□□□□ -1.09
FDH2YPL275W YOL036WQ08206 761 aa8.24□□□□□ -1.09
FDH2YPL275W SIS1P25294 352 aaKnown RBP8.22□□□□□ -1.09
FDH2YPL275W TIF11P38912 153 aaKnown RBP8.22□□□□□ -1.09
FDH2YPL275W EDS1P38073 919 aa8.21□□□□□ -1.1
FDH2YPL275W SET4P42948 560 aa8.21□□□□□ -1.1
FDH2YPL275W MSB4Q12317 492 aa8.19□□□□□ -1.1
FDH2YPL275W COQ8P27697 501 aa8.18□□□□□ -1.1
FDH2YPL275W MIF2P35201 549 aa8.16□□□□□ -1.1
FDH2YPL275W IOC2Q12072 812 aa8.16□□□□□ -1.1
FDH2YPL275W ULI1P43604 169 aa8.15□□□□□ -1.1
FDH2YPL275W TRP5P00931 707 aaKnown RBP8.12□□□□□ -1.11
FDH2YPL275W PTC3P34221 468 aaKnown RBP8.12□□□□□ -1.11
FDH2YPL275W SET1P38827 1080 aaKnown RBP8.12□□□□□ -1.11
FDH2YPL275W GYP5Q12344 894 aa8.12□□□□□ -1.11
FDH2YPL275W NOP53Q12080 455 aaKnown RBP8.11□□□□□ -1.11
FDH2YPL275W EAP1P36041 632 aaKnown RBP8.1□□□□□ -1.11
FDH2YPL275W LDB19Q12502 818 aa8.09□□□□□ -1.11
FDH2YPL275W SAS10Q12136 610 aaPredicted RBP8.08□□□□□ -1.12
FDH2YPL275W DCW1P36091 449 aa8.07□□□□□ -1.12
FDH2YPL275W FKH1P40466 484 aa8.06□□□□□ -1.12
FDH2YPL275W YPR148CQ06523 435 aa8.06□□□□□ -1.12
FDH2YPL275W GRE2Q12068 342 aaKnown RBP8.06□□□□□ -1.12
FDH2YPL275W AIR2Q12476 344 aaKnown RBP8.04□□□□□ -1.12
FDH2YPL275W ABP1P15891 592 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms