Protein–RNA interactions for Protein: P39723

SPC72, Spindle pole component SPC72, yeastyeast

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC72P39723 NSR1YGR159C 1245 nt21.53■■□□□ 1.04
SPC72P39723 YML009W-BYML009W-B 477 nt21.47■■□□□ 1.03
SPC72P39723 NOP1YDL014W 984 nt20.82■□□□□ 0.92
SPC72P39723 MDJ1YFL016C 1536 nt19.26■□□□□ 0.67
SPC72P39723 YKL036CYKL036C 393 nt18.97■□□□□ 0.63
SPC72P39723 SRX1YKL086W 384 nt18.14■□□□□ 0.49
SPC72P39723 Q0297Q0297 156 nt18.1■□□□□ 0.49
SPC72P39723 YJL027CYJL027C 417 nt17.83■□□□□ 0.44
SPC72P39723 YCR051WYCR051W 669 nt17.21■□□□□ 0.35
SPC72P39723 SCS3YGL126W 1143 nt17.11■□□□□ 0.33
SPC72P39723 DBP2YNL112W 1641 nt16.92■□□□□ 0.3
SPC72P39723 YBR190WYBR190W 312 nt16.53■□□□□ 0.24
SPC72P39723 TRN1tP(UGG)A 72 nt16.52■□□□□ 0.24
SPC72P39723 SUF9tP(UGG)F 72 nt16.52■□□□□ 0.24
SPC72P39723 SUF8tP(UGG)H 72 nt16.52■□□□□ 0.24
SPC72P39723 tP(UGG)LtP(UGG)L 72 nt16.52■□□□□ 0.24
SPC72P39723 SUF7tP(UGG)M 72 nt16.52■□□□□ 0.24
SPC72P39723 tP(UGG)N1tP(UGG)N1 72 nt16.52■□□□□ 0.24
SPC72P39723 tP(UGG)N2tP(UGG)N2 72 nt16.52■□□□□ 0.24
SPC72P39723 tP(UGG)O1tP(UGG)O1 72 nt16.52■□□□□ 0.24
SPC72P39723 SUF11tP(UGG)O2 72 nt16.52■□□□□ 0.24
SPC72P39723 YOL085CYOL085C 342 nt16.4■□□□□ 0.22
SPC72P39723 CCC1YLR220W 969 nt16.37■□□□□ 0.21
SPC72P39723 RPP1BYDL130W 321 nt16.24■□□□□ 0.19
SPC72P39723 RTC3YHR087W 336 nt16.18■□□□□ 0.18
SPC72P39723 PKP1YIL042C 1185 nt16.17■□□□□ 0.18
SPC72P39723 RVS167YDR388W 1449 nt16■□□□□ 0.15
SPC72P39723 SCJ1YMR214W 1134 nt15.75■□□□□ 0.11
SPC72P39723 tP(UGG)O3tP(UGG)O3 72 nt15.55■□□□□ 0.08
SPC72P39723 PET122YER153C 765 nt15.52■□□□□ 0.08
SPC72P39723 SCR1SCR1 522 nt15.38■□□□□ 0.05
SPC72P39723 SHR5YOL110W 714 nt15.34■□□□□ 0.05
SPC72P39723 ATS1YAL020C 1002 nt15.24■□□□□ 0.03
SPC72P39723 PUT4YOR348C 1884 nt15.11■□□□□ 0.01
SPC72P39723 YDJ1YNL064C 1230 nt15.07■□□□□ 0
SPC72P39723 RRN5YLR141W 1092 nt15.06■□□□□ 0
SPC72P39723 SSA3YBL075C 1950 nt15.04■□□□□ -0
SPC72P39723 URN1YPR152C 1398 nt15.03■□□□□ -0
SPC72P39723 DEP1YAL013W 1218 nt14.94□□□□□ -0.02
SPC72P39723 OPI9YLR338W 858 nt14.85□□□□□ -0.03
SPC72P39723 RPN10YHR200W 807 nt14.83□□□□□ -0.04
SPC72P39723 SAH1YER043C 1350 nt14.8□□□□□ -0.04
SPC72P39723 ARE1YCR048W 1833 nt14.78□□□□□ -0.04
SPC72P39723 GAR1YHR089C 618 nt14.76□□□□□ -0.05
SPC72P39723 YER088W-BYER088W-B 147 nt14.75□□□□□ -0.05
SPC72P39723 YNL208WYNL208W 600 nt14.73□□□□□ -0.05
SPC72P39723 RSB1YOR049C 1065 nt14.72□□□□□ -0.05
SPC72P39723 POA1YBR022W 534 nt14.65□□□□□ -0.06
SPC72P39723 YHR049C-AYHR049C-A 297 nt14.63□□□□□ -0.07
SPC72P39723 PUN1YLR414C 792 nt14.46□□□□□ -0.09
SPC72P39723 BSC6YOL137W 1494 nt14.38□□□□□ -0.11
SPC72P39723 YJR018WYJR018W 363 nt14.34□□□□□ -0.11
SPC72P39723 BUD23YCR047C 828 nt14.3□□□□□ -0.12
SPC72P39723 PTC2YER089C 1395 nt14.29□□□□□ -0.12
SPC72P39723 TIR1YER011W 765 nt14.28□□□□□ -0.12
SPC72P39723 NAB2YGL122C 1578 nt14.14□□□□□ -0.15
SPC72P39723 PST2YDR032C 597 nt14.14□□□□□ -0.15
SPC72P39723 SSA1YAL005C 1929 nt14.11□□□□□ -0.15
SPC72P39723 RPP2BYDR382W 333 nt14.05□□□□□ -0.16
SPC72P39723 YJR120WYJR120W 351 nt13.97□□□□□ -0.17
SPC72P39723 DAL1YIR027C 1383 nt13.92□□□□□ -0.18
SPC72P39723 FPR4YLR449W 1179 nt13.89□□□□□ -0.19
SPC72P39723 FIS1YIL065C 468 nt13.88□□□□□ -0.19
SPC72P39723 INM2YDR287W 879 nt13.87□□□□□ -0.19
SPC72P39723 PHO4YFR034C 939 nt13.77□□□□□ -0.21
SPC72P39723 SRB2YHR041C 633 nt13.76□□□□□ -0.21
SPC72P39723 SPT5YML010W 3192 nt13.75□□□□□ -0.21
SPC72P39723 YBL100CYBL100C 315 nt13.7□□□□□ -0.22
SPC72P39723 BDH2YAL061W 1254 nt13.68□□□□□ -0.22
SPC72P39723 SHU1YHL006C 453 nt13.61□□□□□ -0.23
SPC72P39723 WWM1YFL010C 636 nt13.59□□□□□ -0.23
SPC72P39723 YPS1YLR120C 1710 nt13.57□□□□□ -0.24
SPC72P39723 YKL097CYKL097C 411 nt13.52□□□□□ -0.25
SPC72P39723 FUN26YAL022C 1554 nt13.51□□□□□ -0.25
SPC72P39723 MEP2YNL142W 1500 nt13.51□□□□□ -0.25
SPC72P39723 YGR021WYGR021W 873 nt13.51□□□□□ -0.25
SPC72P39723 TRM9YML014W 840 nt13.48□□□□□ -0.25
SPC72P39723 YHR165W-AYHR165W-A 312 nt13.47□□□□□ -0.25
SPC72P39723 LSM3YLR438C-A 270 nt13.47□□□□□ -0.25
SPC72P39723 YAL037C-BYAL037C-B 975 nt13.46□□□□□ -0.25
SPC72P39723 YDR095CYDR095C 411 nt13.45□□□□□ -0.26
SPC72P39723 ALF1YNL148C 765 nt13.42□□□□□ -0.26
SPC72P39723 YFL021C-AYFL021C-A 855 nt13.41□□□□□ -0.26
SPC72P39723 SSA4YER103W 1929 nt13.41□□□□□ -0.26
SPC72P39723 HOM6YJR139C 1080 nt13.39□□□□□ -0.27
SPC72P39723 CCT6YDR188W 1641 nt13.32□□□□□ -0.28
SPC72P39723 SUF2tP(AGG)C 72 nt13.29□□□□□ -0.28
SPC72P39723 SUF10tP(AGG)N 72 nt13.29□□□□□ -0.28
SPC72P39723 MNP1YGL068W 585 nt13.27□□□□□ -0.29
SPC72P39723 DCW1YKL046C 1350 nt13.26□□□□□ -0.29
SPC72P39723 RPP2AYOL039W 321 nt13.22□□□□□ -0.29
SPC72P39723 RKM5YLR137W 1104 nt13.21□□□□□ -0.29
SPC72P39723 Q0182Q0182 405 nt13.2□□□□□ -0.3
SPC72P39723 SIS1YNL007C 1059 nt13.15□□□□□ -0.3
SPC72P39723 YMR090WYMR090W 684 nt13.14□□□□□ -0.31
SPC72P39723 EMI2YDR516C 1503 nt13.13□□□□□ -0.31
SPC72P39723 PTP1YDL230W 1008 nt13.11□□□□□ -0.31
SPC72P39723 YOL037CYOL037C 354 nt13.04□□□□□ -0.32
SPC72P39723 CAC2YML102W 1407 nt13.04□□□□□ -0.32
SPC72P39723 YDL221WYDL221W 552 nt13.02□□□□□ -0.33
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms