RNA–Protein interactions for RNA: YML005W

TRM12, Transcript of S-adenosylmethionine-dependent methyltransferase, yeast

Gene TRM12, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM12	YML005W	YGR250C	P53316	781 aa	Known RBP	4.11	□□□□□ -1.75
TRM12	YML005W	SUN4	P53616	420 aa		4.11	□□□□□ -1.75
TRM12	YML005W	SYF1	Q04048	859 aa	Predicted RBP	4.11	□□□□□ -1.75
TRM12	YML005W	ARP9	Q05123	467 aa		4.11	□□□□□ -1.75
TRM12	YML005W	NUS1	Q12063	375 aa		4.11	□□□□□ -1.75
TRM12	YML005W	PUS9	Q12069	462 aa		4.11	□□□□□ -1.75
TRM12	YML005W	RRG1	Q12167	365 aa	Predicted RBP	4.11	□□□□□ -1.75
TRM12	YML005W	LCB4	Q12246	624 aa		4.11	□□□□□ -1.75
TRM12	YML005W	SCM3	Q12334	223 aa		4.11	□□□□□ -1.75
TRM12	YML005W	SNU66	Q12420	587 aa	Predicted RBP	4.11	□□□□□ -1.75
TRM12	YML005W	CKA1	P15790	372 aa		4.1	□□□□□ -1.75
TRM12	YML005W	RNR3	P21672	869 aa	Known RBP	4.1	□□□□□ -1.75
TRM12	YML005W	SRB5	P32585	307 aa		4.1	□□□□□ -1.75
TRM12	YML005W	LOT5	P34234	306 aa		4.1	□□□□□ -1.75
TRM12	YML005W	GLG1	P36143	616 aa		4.1	□□□□□ -1.75
TRM12	YML005W	NOP4	P37838	685 aa	Known RBP	4.1	□□□□□ -1.75
TRM12	YML005W	YMC2	P38087	329 aa		4.1	□□□□□ -1.75
TRM12	YML005W	MTG2	P38860	518 aa		4.1	□□□□□ -1.75
TRM12	YML005W	RTS1	P38903	757 aa		4.1	□□□□□ -1.75
TRM12	YML005W	UBP7	P40453	1071 aa		4.1	□□□□□ -1.75
TRM12	YML005W	SPO22	P40511	975 aa		4.1	□□□□□ -1.75
TRM12	YML005W	IME4	P41833	600 aa		4.1	□□□□□ -1.75
TRM12	YML005W	LCL3	P53153	274 aa		4.1	□□□□□ -1.75
TRM12	YML005W	SPN1	Q06505	410 aa	Predicted RBP	4.1	□□□□□ -1.75
TRM12	YML005W	GPN2	Q08726	347 aa	Predicted RBP	4.1	□□□□□ -1.75
TRM12	YML005W	CTI6	Q08923	506 aa		4.1	□□□□□ -1.75
TRM12	YML005W	TGS1	Q12052	315 aa		4.1	□□□□□ -1.75
TRM12	YML005W	NMD4	Q12129	218 aa		4.1	□□□□□ -1.75
TRM12	YML005W	GCN4	P03069	281 aa		4.09	□□□□□ -1.75
TRM12	YML005W	CHO2	P05374	869 aa	Known RBP	4.09	□□□□□ -1.75
TRM12	YML005W	HOM3	P10869	527 aa		4.09	□□□□□ -1.75
TRM12	YML005W	RED1	P14291	827 aa		4.09	□□□□□ -1.75
TRM12	YML005W	FUR1	P18562	216 aa	Known RBP	4.09	□□□□□ -1.75
TRM12	YML005W	KGD2	P19262	463 aa	Predicted RBP	4.09	□□□□□ -1.75
TRM12	YML005W	RRP43	P25359	394 aa	Predicted RBP	4.09	□□□□□ -1.75
TRM12	YML005W	POL4	P25615	582 aa		4.09	□□□□□ -1.75
TRM12	YML005W	MAL33	P38157	468 aa		4.09	□□□□□ -1.75
TRM12	YML005W	UBP13	P38187	747 aa		4.09	□□□□□ -1.75
TRM12	YML005W	FLC2	P39719	783 aa		4.09	□□□□□ -1.75
TRM12	YML005W	SAP1	P39955	897 aa	Known RBP	4.09	□□□□□ -1.75
TRM12	YML005W	SWP82	P43554	623 aa		4.09	□□□□□ -1.75
TRM12	YML005W	MSE1	P48525	536 aa		4.09	□□□□□ -1.75
TRM12	YML005W	RSC1	P53236	928 aa		4.09	□□□□□ -1.75
TRM12	YML005W	COQ6	P53318	479 aa		4.09	□□□□□ -1.75
TRM12	YML005W	ATG23	Q06671	453 aa		4.09	□□□□□ -1.75
TRM12	YML005W	YDL073W	Q07454	984 aa		4.09	□□□□□ -1.75
TRM12	YML005W	SPE4	Q12455	300 aa		4.09	□□□□□ -1.75
TRM12	YML005W	ERG3	P32353	365 aa		4.08	□□□□□ -1.76
TRM12	YML005W	HES1	P35843	434 aa		4.08	□□□□□ -1.76
TRM12	YML005W	SRO77	P38163	1010 aa		4.08	□□□□□ -1.76
TRM12	YML005W	YBL029W	P38201	376 aa		4.08	□□□□□ -1.76
TRM12	YML005W	PIH1	P38768	344 aa		4.08	□□□□□ -1.76
TRM12	YML005W	BDH2	P39713	417 aa		4.08	□□□□□ -1.76
TRM12	YML005W	FUN12	P39730	1002 aa	Known RBP	4.08	□□□□□ -1.76
TRM12	YML005W	MAM1	P40065	302 aa		4.08	□□□□□ -1.76
TRM12	YML005W	MSY1	P48527	492 aa		4.08	□□□□□ -1.76
TRM12	YML005W	STB4	P50104	949 aa		4.08	□□□□□ -1.76
TRM12	YML005W	ADE16	P54113	591 aa	Known RBP	4.08	□□□□□ -1.76
TRM12	YML005W	RPT6	Q01939	405 aa	Known RBP	4.08	□□□□□ -1.76
TRM12	YML005W	RAD33	Q04231	177 aa		4.08	□□□□□ -1.76
TRM12	YML005W	CRN1	Q06440	651 aa		4.08	□□□□□ -1.76
TRM12	YML005W	GET3	Q12154	354 aa	Known RBP	4.08	□□□□□ -1.76
TRM12	YML005W	MDM20	Q12387	796 aa	Known RBP	4.08	□□□□□ -1.76
TRM12	YML005W	NOP58	Q12499	511 aa	Known RBP	4.08	□□□□□ -1.76
TRM12	YML005W	ZPS1	Q12512	249 aa		4.08	□□□□□ -1.76
TRM12	YML005W	CPA2	P03965	1118 aa	Known RBP	4.07	□□□□□ -1.76
TRM12	YML005W	WHI2	P12611	486 aa		4.07	□□□□□ -1.76
TRM12	YML005W	PCT1	P13259	424 aa		4.07	□□□□□ -1.76
TRM12	YML005W	ROX1	P25042	368 aa		4.07	□□□□□ -1.76
TRM12	YML005W	SIP1	P32578	815 aa		4.07	□□□□□ -1.76
TRM12	YML005W	NPL6	P32832	435 aa		4.07	□□□□□ -1.76
TRM12	YML005W	TFC3	P34111	1160 aa		4.07	□□□□□ -1.76
TRM12	YML005W	MTH1	P35198	433 aa		4.07	□□□□□ -1.76
TRM12	YML005W	CHS7	P38843	316 aa		4.07	□□□□□ -1.76
TRM12	YML005W	YEL057C	P39983	233 aa		4.07	□□□□□ -1.76
TRM12	YML005W	LSM5	P40089	93 aa	Known RBP	4.07	□□□□□ -1.76
TRM12	YML005W	DJP1	P40564	432 aa		4.07	□□□□□ -1.76
TRM12	YML005W	CIR1	P42940	261 aa		4.07	□□□□□ -1.76
TRM12	YML005W	YFL015C	P43578	164 aa		4.07	□□□□□ -1.76
TRM12	YML005W	YGL117W	P53133	265 aa		4.07	□□□□□ -1.76
TRM12	YML005W	FCP1	Q03254	732 aa		4.07	□□□□□ -1.76
TRM12	YML005W	YDR109C	Q04585	715 aa		4.07	□□□□□ -1.76
TRM12	YML005W	SKG3	Q06315	1026 aa		4.07	□□□□□ -1.76
TRM12	YML005W	CRT10	Q08226	957 aa		4.07	□□□□□ -1.76
TRM12	YML005W	TAF3	Q12297	353 aa		4.07	□□□□□ -1.76
TRM12	YML005W	YBR085C-A	O43137	85 aa		4.06	□□□□□ -1.76
TRM12	YML005W	CBS1	P14066	229 aa		4.06	□□□□□ -1.76
TRM12	YML005W	PRE8	P23639	250 aa		4.06	□□□□□ -1.76
TRM12	YML005W	PEP3	P27801	918 aa		4.06	□□□□□ -1.76
TRM12	YML005W	LAC1	P28496	418 aa		4.06	□□□□□ -1.76
TRM12	YML005W	AUR1	P36107	401 aa	Predicted RBP	4.06	□□□□□ -1.76
TRM12	YML005W	RPF2	P36160	344 aa	Known RBP	4.06	□□□□□ -1.76
TRM12	YML005W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
TRM12	YML005W	GPD2	P41911	440 aa	Known RBP	4.06	□□□□□ -1.76
TRM12	YML005W	ASN1	P49089	572 aa	Known RBP	4.06	□□□□□ -1.76
TRM12	YML005W	GLO1	P50107	326 aa		4.06	□□□□□ -1.76
TRM12	YML005W	CPR8	P53728	308 aa		4.06	□□□□□ -1.76
TRM12	YML005W	YML122C	Q03207	126 aa		4.06	□□□□□ -1.76
TRM12	YML005W	WAR1	Q03631	944 aa		4.06	□□□□□ -1.76
TRM12	YML005W	YMR155W	Q03795	547 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 67.8 ms