RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C ADY2P25613 283 aa2.36□□□□□ -2.03
VPS35YJL154C YMC1P32331 307 aa2.36□□□□□ -2.03
VPS35YJL154C EMP70P32802 667 aa2.36□□□□□ -2.03
VPS35YJL154C APD1P38281 316 aa2.36□□□□□ -2.03
VPS35YJL154C AXL2P38928 823 aa2.36□□□□□ -2.03
VPS35YJL154C YEL068CP39977 110 aa2.36□□□□□ -2.03
VPS35YJL154C DCP2P53550 970 aaKnown RBP2.36□□□□□ -2.03
VPS35YJL154C BSC5P53755 489 aa2.36□□□□□ -2.03
VPS35YJL154C SNO4Q04902 237 aa2.36□□□□□ -2.03
VPS35YJL154C IRC3Q06683 689 aa2.36□□□□□ -2.03
VPS35YJL154C HSP33Q08914 237 aaKnown RBP2.36□□□□□ -2.03
VPS35YJL154C MRN1Q08925 612 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
VPS35YJL154C PCL8Q08966 492 aa2.36□□□□□ -2.03
VPS35YJL154C HSP32Q08992 237 aa2.36□□□□□ -2.03
VPS35YJL154C LCB4Q12246 624 aa2.36□□□□□ -2.03
VPS35YJL154C PCD1Q12524 340 aa2.36□□□□□ -2.03
VPS35YJL154C YOR111WQ99210 232 aa2.36□□□□□ -2.03
VPS35YJL154C CHD1P32657 1468 aa2.35□□□□□ -2.03
VPS35YJL154C RRP43P25359 394 aaPredicted RBP2.35□□□□□ -2.03
VPS35YJL154C MSS51P32335 436 aa2.35□□□□□ -2.03
VPS35YJL154C RPN12P32496 274 aa2.35□□□□□ -2.03
VPS35YJL154C VBA2P38358 474 aaKnown RBP2.35□□□□□ -2.03
VPS35YJL154C ERP2P39704 215 aa2.35□□□□□ -2.03
VPS35YJL154C PAC2P39937 518 aa2.35□□□□□ -2.03
VPS35YJL154C YJR061WP40355 935 aa2.35□□□□□ -2.03
VPS35YJL154C MEP3P53390 489 aa2.35□□□□□ -2.03
VPS35YJL154C ARG7Q04728 441 aa2.35□□□□□ -2.03
VPS35YJL154C TRM8Q12009 286 aa2.35□□□□□ -2.03
VPS35YJL154C HUA2Q12134 243 aa2.35□□□□□ -2.03
VPS35YJL154C YPK9Q12697 1472 aa2.35□□□□□ -2.03
VPS35YJL154C FUM1P08417 488 aaKnown RBP2.35□□□□□ -2.03
VPS35YJL154C TUB1P09733 447 aaKnown RBP2.35□□□□□ -2.03
VPS35YJL154C RFA2P26754 273 aaKnown RBP2.35□□□□□ -2.03
VPS35YJL154C LHS1P36016 881 aa2.35□□□□□ -2.03
VPS35YJL154C ERC1P38767 581 aa2.35□□□□□ -2.03
VPS35YJL154C ASG1P40467 964 aa2.35□□□□□ -2.03
VPS35YJL154C NPA3P47122 385 aa2.35□□□□□ -2.03
VPS35YJL154C CSL4P53859 292 aaPredicted RBP2.35□□□□□ -2.03
VPS35YJL154C RAD33Q04231 177 aa2.35□□□□□ -2.03
VPS35YJL154C MRI1Q06489 411 aaKnown RBP2.35□□□□□ -2.03
VPS35YJL154C BAG7Q12128 409 aa2.35□□□□□ -2.03
VPS35YJL154C CDC24P11433 854 aaPredicted RBP2.34□□□□□ -2.03
VPS35YJL154C YBL029WP38201 376 aa2.34□□□□□ -2.03
VPS35YJL154C AFG3P39925 761 aa2.34□□□□□ -2.03
VPS35YJL154C RRT6P53117 311 aaPredicted RBP2.34□□□□□ -2.03
VPS35YJL154C IMO32P53219 342 aa2.34□□□□□ -2.03
VPS35YJL154C SWA2Q06677 668 aa2.34□□□□□ -2.03
VPS35YJL154C CYK3Q07533 885 aa2.34□□□□□ -2.03
VPS35YJL154C RTC1Q08281 1341 aa2.34□□□□□ -2.03
VPS35YJL154C TRM3Q07527 1436 aa2.34□□□□□ -2.04
VPS35YJL154C ILS1P09436 1072 aaKnown RBP2.34□□□□□ -2.04
VPS35YJL154C ORC2P32833 620 aa2.34□□□□□ -2.04
VPS35YJL154C SOF1P33750 489 aaKnown RBP2.34□□□□□ -2.04
VPS35YJL154C MRX1P40050 688 aa2.34□□□□□ -2.04
VPS35YJL154C UBP7P40453 1071 aa2.34□□□□□ -2.04
VPS35YJL154C LYS14P40971 790 aa2.34□□□□□ -2.04
VPS35YJL154C VPS4P52917 437 aa2.34□□□□□ -2.04
VPS35YJL154C YNL092WP53934 400 aa2.34□□□□□ -2.04
VPS35YJL154C CRN1Q06440 651 aa2.34□□□□□ -2.04
VPS35YJL154C YPR117WQ06116 2489 aa2.33□□□□□ -2.04
VPS35YJL154C INH1P01097 85 aa2.33□□□□□ -2.04
VPS35YJL154C HOM2P13663 365 aaKnown RBP2.33□□□□□ -2.04
VPS35YJL154C ERG8P24521 451 aa2.33□□□□□ -2.04
VPS35YJL154C HES1P35843 434 aa2.33□□□□□ -2.04
VPS35YJL154C RIX1P38883 763 aaPredicted RBP2.33□□□□□ -2.04
VPS35YJL154C TAX4P47030 604 aa2.33□□□□□ -2.04
VPS35YJL154C BNA1P47096 177 aa2.33□□□□□ -2.04
VPS35YJL154C YAT1P80235 687 aa2.33□□□□□ -2.04
VPS35YJL154C RCO1Q04779 684 aa2.33□□□□□ -2.04
VPS35YJL154C COG4Q06096 861 aa2.33□□□□□ -2.04
VPS35YJL154C YDR056CQ12025 205 aa2.33□□□□□ -2.04
VPS35YJL154C YLR049CQ12110 428 aa2.33□□□□□ -2.04
VPS35YJL154C TRM732Q03496 1420 aa2.33□□□□□ -2.04
VPS35YJL154C YBR085C-AO43137 85 aa2.33□□□□□ -2.04
VPS35YJL154C AQY1P0CD91 305 aa2.33□□□□□ -2.04
VPS35YJL154C ERG11P10614 530 aa2.33□□□□□ -2.04
VPS35YJL154C PEX2P32800 271 aa2.33□□□□□ -2.04
VPS35YJL154C ATP23P53722 227 aa2.33□□□□□ -2.04
VPS35YJL154C ARO10Q06408 635 aa2.33□□□□□ -2.04
VPS35YJL154C TPO3Q06451 622 aa2.33□□□□□ -2.04
VPS35YJL154C TCO89Q08921 799 aa2.33□□□□□ -2.04
VPS35YJL154C URE2P23202 354 aaKnown RBP2.32□□□□□ -2.04
VPS35YJL154C PTC6P25646 442 aa2.32□□□□□ -2.04
VPS35YJL154C SRB5P32585 307 aa2.32□□□□□ -2.04
VPS35YJL154C MUD2P36084 527 aaKnown RBP2.32□□□□□ -2.04
VPS35YJL154C ALY1P36117 915 aa2.32□□□□□ -2.04
VPS35YJL154C JNM1P36224 373 aa2.32□□□□□ -2.04
VPS35YJL154C EXO1P39875 702 aa2.32□□□□□ -2.04
VPS35YJL154C DPH1P40487 425 aaKnown RBP2.32□□□□□ -2.04
VPS35YJL154C TDA10P42938 290 aa2.32□□□□□ -2.04
VPS35YJL154C ADE16P54113 591 aaKnown RBP2.32□□□□□ -2.04
VPS35YJL154C THI3Q07471 609 aa2.32□□□□□ -2.04
VPS35YJL154C LEA1Q08963 238 aaPredicted RBP2.32□□□□□ -2.04
VPS35YJL154C SUT2Q12286 268 aa2.32□□□□□ -2.04
VPS35YJL154C YOR019WQ99248 730 aa2.32□□□□□ -2.04
VPS35YJL154C HXK2P04807 486 aaKnown RBP2.32□□□□□ -2.04
VPS35YJL154C SES1P07284 462 aaKnown RBP2.32□□□□□ -2.04
VPS35YJL154C YML003WP0CF16 290 aa2.32□□□□□ -2.04
VPS35YJL154C MRP2P10663 115 aaPredicted RBP2.32□□□□□ -2.04
VPS35YJL154C NUP1P20676 1076 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms