RNA–Protein interactions for RNA: ENSMUST00000202769.1

Trim54-202, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Trim54, Length 1,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-202ENSMUST00000202769 Spint4Q9D263 159 aa7.86□□□□□ -1.15
Trim54-202ENSMUST00000202769 2310079G19RikQ9D6L6 185 aa7.86□□□□□ -1.15
Trim54-202ENSMUST00000202769 Gm10999F6Q4M4 69 aa7.85□□□□□ -1.15
Trim54-202ENSMUST00000202769 Smlr1J3QMJ4 66 aa7.8□□□□□ -1.16
Trim54-202ENSMUST00000202769 Tmem258P61166 79 aa7.78□□□□□ -1.16
Trim54-202ENSMUST00000202769 Krtap4-1Q3UUY3 169 aa7.76□□□□□ -1.17
Trim54-202ENSMUST00000202769 Mdn1A2ANY6 5589 aaKnown RBP7.76□□□□□ -1.17
Trim54-202ENSMUST00000202769 Lce1jD3YUU5 139 aa7.75□□□□□ -1.17
Trim54-202ENSMUST00000202769 Gm19935A0A1B0GSF9 52 aa7.72□□□□□ -1.17
Trim54-202ENSMUST00000202769 Gm10160F6Y577 67 aa7.72□□□□□ -1.17
Trim54-202ENSMUST00000202769 SvipQ3UZP4 77 aa7.72□□□□□ -1.17
Trim54-202ENSMUST00000202769 Krtap12-1Q9Z287 130 aa7.71□□□□□ -1.17
Trim54-202ENSMUST00000202769 Gm19426M0QWC7 77 aa7.69□□□□□ -1.18
Trim54-202ENSMUST00000202769 Defb38Q7TNV7 63 aa7.68□□□□□ -1.18
Trim54-202ENSMUST00000202769 Coa5Q99M07 74 aa7.68□□□□□ -1.18
Trim54-202ENSMUST00000202769 Pet100P0DJE0 76 aa7.67□□□□□ -1.18
Trim54-202ENSMUST00000202769 4930507D05RikQ8C9C9 103 aa7.67□□□□□ -1.18
Trim54-202ENSMUST00000202769 SmcpP15265 143 aa7.66□□□□□ -1.18
Trim54-202ENSMUST00000202769 Gm10643Q3URG9 111 aa7.66□□□□□ -1.18
Trim54-202ENSMUST00000202769 Krtap3-1A2A591 98 aa7.62□□□□□ -1.19
Trim54-202ENSMUST00000202769 Gm21798J3QNU5 87 aa7.61□□□□□ -1.19
Trim54-202ENSMUST00000202769 SnurfQ9WU12 71 aa7.61□□□□□ -1.19
Trim54-202ENSMUST00000202769 Gm11564A2A4L9 201 aa7.59□□□□□ -1.19
Trim54-202ENSMUST00000202769 Gm11563B1AQ90 168 aa7.59□□□□□ -1.19
Trim54-202ENSMUST00000202769 Gm11595B1AQA7 289 aa7.59□□□□□ -1.19
Trim54-202ENSMUST00000202769 Krtap4-8B1AQA8 209 aa7.59□□□□□ -1.19
Trim54-202ENSMUST00000202769 Pla2g10Q9QXX3 151 aa7.57□□□□□ -1.2
Trim54-202ENSMUST00000202769 Gm6358A0A087WPH4 74 aa7.54□□□□□ -1.2
Trim54-202ENSMUST00000202769 Cdc42se1Q8BHL7 80 aa7.53□□□□□ -1.2
Trim54-202ENSMUST00000202769 Serp1Q9Z1W5 66 aa7.53□□□□□ -1.2
Trim54-202ENSMUST00000202769 Prm2P07978 107 aa7.52□□□□□ -1.2
Trim54-202ENSMUST00000202769 Rps28P62858 69 aaKnown RBP7.52□□□□□ -1.2
Trim54-202ENSMUST00000202769 Smim20D3Z7Q2 69 aa7.52□□□□□ -1.21
Trim54-202ENSMUST00000202769 Krtap19-9aF8WH65 55 aa7.48□□□□□ -1.21
Trim54-202ENSMUST00000202769 Brk1Q91VR8 75 aa7.44□□□□□ -1.22
Trim54-202ENSMUST00000202769 Defb1P56386 69 aa7.41□□□□□ -1.22
Trim54-202ENSMUST00000202769 Gm10197F6QEY5 67 aa7.39□□□□□ -1.23
Trim54-202ENSMUST00000202769 Gm20661K7N787 53 aa7.35□□□□□ -1.23
Trim54-202ENSMUST00000202769 Cox6b2Q80ZN9 88 aa7.35□□□□□ -1.23
Trim54-202ENSMUST00000202769 SptssbQ925E8 76 aa7.35□□□□□ -1.23
Trim54-202ENSMUST00000202769 BC029722A0A0N4SW31 51 aa7.35□□□□□ -1.23
Trim54-202ENSMUST00000202769 Krtap4-9B1AQA9 244 aa7.35□□□□□ -1.23
Trim54-202ENSMUST00000202769 Gm17606F6ZL36 78 aa7.34□□□□□ -1.23
Trim54-202ENSMUST00000202769 Phxr4P15974 95 aa7.34□□□□□ -1.23
Trim54-202ENSMUST00000202769 Gm20537G3UYK7 97 aa7.32□□□□□ -1.24
Trim54-202ENSMUST00000202769 H2al1aQ5M8Q2 105 aa7.31□□□□□ -1.24
Trim54-202ENSMUST00000202769 H2al1eQ810S6 105 aa7.31□□□□□ -1.24
Trim54-202ENSMUST00000202769 CriptO70333 101 aa7.3□□□□□ -1.24
Trim54-202ENSMUST00000202769 Lce1iQ9D6P5 149 aa7.27□□□□□ -1.25
Trim54-202ENSMUST00000202769 Spink7Q6IE32 76 aa7.23□□□□□ -1.25
Trim54-202ENSMUST00000202769 Mt4P47945 62 aa7.22□□□□□ -1.25
Trim54-202ENSMUST00000202769 Gm10382Q3V0T5 144 aa7.22□□□□□ -1.25
Trim54-202ENSMUST00000202769 Uqcr11Q9CPX8 56 aa7.21□□□□□ -1.25
Trim54-202ENSMUST00000202769 Fsip2A2ARZ3 6995 aa7.2□□□□□ -1.26
Trim54-202ENSMUST00000202769 H2al1bA0A087WP11 105 aa7.19□□□□□ -1.26
Trim54-202ENSMUST00000202769 Limd2Q8BGB5 128 aa7.18□□□□□ -1.26
Trim54-202ENSMUST00000202769 Ndufb1P0DN34 57 aa7.18□□□□□ -1.26
Trim54-202ENSMUST00000202769 Lce1a2Q9D1K4 149 aa7.13□□□□□ -1.27
Trim54-202ENSMUST00000202769 Mt2P02798 61 aa7.12□□□□□ -1.27
Trim54-202ENSMUST00000202769 Krtap9-3Q3V2C1 136 aa7.1□□□□□ -1.27
Trim54-202ENSMUST00000202769 Krtap4-13Q9D7P3 165 aa7.08□□□□□ -1.28
Trim54-202ENSMUST00000202769 Krtap6-3A0A087WQL6 57 aa7.05□□□□□ -1.28
Trim54-202ENSMUST00000202769 Gm10337F7DEP7 55 aa7.01□□□□□ -1.29
Trim54-202ENSMUST00000202769 Krtap8-1O08633 61 aa7.01□□□□□ -1.29
Trim54-202ENSMUST00000202769 Sec61gP60060 68 aa6.99□□□□□ -1.29
Trim54-202ENSMUST00000202769 Sox16Q62247 57 aa6.97□□□□□ -1.29
Trim54-202ENSMUST00000202769 H2al1kJ3QP08 105 aa6.94□□□□□ -1.3
Trim54-202ENSMUST00000202769 Lce1bQ9D149 137 aa6.94□□□□□ -1.3
Trim54-202ENSMUST00000202769 H2al1mQ9DAD9 105 aa6.94□□□□□ -1.3
Trim54-202ENSMUST00000202769 Sprr2kO70562 68 aa6.89□□□□□ -1.31
Trim54-202ENSMUST00000202769 4933415A04RikQ9D443 101 aa6.85□□□□□ -1.31
Trim54-202ENSMUST00000202769 2300003K06RikA2A4M0 262 aa6.8□□□□□ -1.32
Trim54-202ENSMUST00000202769 Sprr2a3Q4KL71 83 aa6.8□□□□□ -1.32
Trim54-202ENSMUST00000202769 Gm9955Q8CEJ8 102 aa6.8□□□□□ -1.32
Trim54-202ENSMUST00000202769 Sprr2a1Q9CQK8 83 aa6.8□□□□□ -1.32
Trim54-202ENSMUST00000202769 Gm38119A0A0A6YX29 146 aa6.79□□□□□ -1.32
Trim54-202ENSMUST00000202769 Lce1lQ9D1G7 135 aa6.79□□□□□ -1.32
Trim54-202ENSMUST00000202769 Krtap22-2J3QNX6 67 aa6.78□□□□□ -1.32
Trim54-202ENSMUST00000202769 Krtap4-7Q9D732 168 aa6.71□□□□□ -1.34
Trim54-202ENSMUST00000202769 Gm17402F6Z0L5 76 aa6.63□□□□□ -1.35
Trim54-202ENSMUST00000202769 Gm19668J3QMD1 248 aa6.57□□□□□ -1.36
Trim54-202ENSMUST00000202769 Gm3646F6S692 53 aa6.56□□□□□ -1.36
Trim54-202ENSMUST00000202769 Ndufs5Q99LY9 106 aa6.54□□□□□ -1.36
Trim54-202ENSMUST00000202769 Lce1a1Q9CQH5 143 aa6.46□□□□□ -1.38
Trim54-202ENSMUST00000202769 Sprr2gO70558 76 aa6.44□□□□□ -1.38
Trim54-202ENSMUST00000202769 Krtap20-2E9Q0A8 60 aa6.43□□□□□ -1.38
Trim54-202ENSMUST00000202769 Gm3880A0A1B0GSB3 72 aa6.42□□□□□ -1.38
Trim54-202ENSMUST00000202769 Lce1hQ9D6R3 140 aa6.4□□□□□ -1.39
Trim54-202ENSMUST00000202769 Gm21887J3QQ04 176 aa6.39□□□□□ -1.39
Trim54-202ENSMUST00000202769 Krtap19-9bQ99NG9 58 aa6.35□□□□□ -1.39
Trim54-202ENSMUST00000202769 Lce1eQ9D139 143 aa6.3□□□□□ -1.4
Trim54-202ENSMUST00000202769 2310046K23RikA0A0A6YVW6 87 aa6.22□□□□□ -1.41
Trim54-202ENSMUST00000202769 Gm12216A0A1W2P827 62 aa6.22□□□□□ -1.41
Trim54-202ENSMUST00000202769 A0A1Y7VJH8 109 aa6.21□□□□□ -1.42
Trim54-202ENSMUST00000202769 Camk2n1Q6QWF9 78 aa6.19□□□□□ -1.42
Trim54-202ENSMUST00000202769 Romo1P60603 79 aa6.16□□□□□ -1.42
Trim54-202ENSMUST00000202769 Lce1dQ9D731 133 aa6.16□□□□□ -1.42
Trim54-202ENSMUST00000202769 Krtap5-2Q9D5Z7 189 aa6.05□□□□□ -1.44
Trim54-202ENSMUST00000202769 Eppk1Q8R0W0 6548 aa5.98□□□□□ -1.45
Trim54-202ENSMUST00000202769 Sprr2iO70560 76 aa5.95□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 63.9 ms