RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W SIP1P32578 815 aa4.11□□□□□ -1.75
UBC9YDL064W XRS2P33301 854 aa4.11□□□□□ -1.75
UBC9YDL064W NPR3P38742 1146 aa4.11□□□□□ -1.75
UBC9YDL064W OPT1P40897 799 aa4.11□□□□□ -1.75
UBC9YDL064W IML2P47031 731 aa4.11□□□□□ -1.75
UBC9YDL064W CTF18P49956 741 aa4.11□□□□□ -1.75
UBC9YDL064W COG1P53079 417 aa4.11□□□□□ -1.75
UBC9YDL064W SVL3Q03088 825 aaKnown RBP4.11□□□□□ -1.75
UBC9YDL064W MTG1Q03151 367 aaPredicted RBP4.11□□□□□ -1.75
UBC9YDL064W VID22Q05934 901 aa4.11□□□□□ -1.75
UBC9YDL064W SSP2Q08646 371 aa4.11□□□□□ -1.75
UBC9YDL064W FRE7Q12333 620 aa4.11□□□□□ -1.75
UBC9YDL064W ATP2P00830 511 aaKnown RBP4.1□□□□□ -1.75
UBC9YDL064W TPK1P06244 397 aa4.1□□□□□ -1.75
UBC9YDL064W ILV6P25605 309 aaKnown RBP4.1□□□□□ -1.75
UBC9YDL064W HOT13P36078 116 aa4.1□□□□□ -1.75
UBC9YDL064W RPF2P36160 344 aaKnown RBP4.1□□□□□ -1.75
UBC9YDL064W VBA2P38358 474 aaKnown RBP4.1□□□□□ -1.75
UBC9YDL064W IMD2P38697 523 aaKnown RBP4.1□□□□□ -1.75
UBC9YDL064W UBP7P40453 1071 aa4.1□□□□□ -1.75
UBC9YDL064W SKP2P42843 763 aa4.1□□□□□ -1.75
UBC9YDL064W IMD3P50095 523 aaKnown RBP4.1□□□□□ -1.75
UBC9YDL064W PSP1P50896 841 aaKnown RBP4.1□□□□□ -1.75
UBC9YDL064W RAD34Q06665 692 aa4.1□□□□□ -1.75
UBC9YDL064W CSR1Q06705 408 aaKnown RBP4.1□□□□□ -1.75
UBC9YDL064W ERG11P10614 530 aa4.09□□□□□ -1.75
UBC9YDL064W RAD16P31244 790 aa4.09□□□□□ -1.75
UBC9YDL064W SWC3P31376 625 aa4.09□□□□□ -1.75
UBC9YDL064W SLC1P33333 303 aa4.09□□□□□ -1.75
UBC9YDL064W KES1P35844 434 aaKnown RBP4.09□□□□□ -1.75
UBC9YDL064W MRPL36P36531 177 aa4.09□□□□□ -1.75
UBC9YDL064W PSD1P39006 500 aa4.09□□□□□ -1.75
UBC9YDL064W VID27P40157 782 aa4.09□□□□□ -1.75
UBC9YDL064W CSL4P53859 292 aaPredicted RBP4.09□□□□□ -1.75
UBC9YDL064W LGE1Q02796 332 aaKnown RBP4.09□□□□□ -1.75
UBC9YDL064W YDR109CQ04585 715 aa4.09□□□□□ -1.75
UBC9YDL064W GTB1Q04924 702 aa4.09□□□□□ -1.75
UBC9YDL064W THI7Q05998 598 aa4.09□□□□□ -1.75
UBC9YDL064W TMA16Q08687 178 aa4.09□□□□□ -1.75
UBC9YDL064W NEW1Q08972 1196 aaKnown RBP4.09□□□□□ -1.75
UBC9YDL064W TY2A-LR1P0C2J4 438 aa4.08□□□□□ -1.76
UBC9YDL064W TY2A-FP0CX61 438 aa4.08□□□□□ -1.76
UBC9YDL064W TY2A-GR2P0CX62 438 aa4.08□□□□□ -1.76
UBC9YDL064W HOM2P13663 365 aaKnown RBP4.08□□□□□ -1.76
UBC9YDL064W MAK32P23060 363 aa4.08□□□□□ -1.76
UBC9YDL064W YSP3P25036 478 aa4.08□□□□□ -1.76
UBC9YDL064W TY2A-CP25383 438 aa4.08□□□□□ -1.76
UBC9YDL064W LAC1P28496 418 aa4.08□□□□□ -1.76
UBC9YDL064W HES1P35843 434 aa4.08□□□□□ -1.76
UBC9YDL064W FUN12P39730 1002 aaKnown RBP4.08□□□□□ -1.76
UBC9YDL064W TY2A-DR2Q03483 438 aa4.08□□□□□ -1.76
UBC9YDL064W BUD21Q08492 214 aaPredicted RBP4.08□□□□□ -1.76
UBC9YDL064W TY2A-BQ12260 438 aa4.08□□□□□ -1.76
UBC9YDL064W TY2A-OR2Q12293 438 aa4.08□□□□□ -1.76
UBC9YDL064W RDL1Q12305 139 aaKnown RBP4.08□□□□□ -1.76
UBC9YDL064W TY2A-DR1Q12392 438 aa4.08□□□□□ -1.76
UBC9YDL064W TY2A-OR1Q12439 438 aa4.08□□□□□ -1.76
UBC9YDL064W YLR111WQ12528 110 aa4.08□□□□□ -1.76
UBC9YDL064W TY2A-DR3Q99303 438 aa4.08□□□□□ -1.76
UBC9YDL064W TOP1P04786 769 aa4.07□□□□□ -1.76
UBC9YDL064W PFK2P16862 959 aaKnown RBP RIP-Chip data4.07□□□□□ -1.76not detected
UBC9YDL064W NUP1P20676 1076 aa4.07□□□□□ -1.76
UBC9YDL064W GSY2P27472 705 aa4.07□□□□□ -1.76
UBC9YDL064W GSH1P32477 678 aa4.07□□□□□ -1.76
UBC9YDL064W RRN3P36070 627 aa4.07□□□□□ -1.76
UBC9YDL064W CUE2P36075 443 aaKnown RBP4.07□□□□□ -1.76
UBC9YDL064W ERV46P39727 415 aa4.07□□□□□ -1.76
UBC9YDL064W ATF1P40353 525 aa4.07□□□□□ -1.76
UBC9YDL064W MSY1P48527 492 aa4.07□□□□□ -1.76
UBC9YDL064W YPR003CP53394 754 aa4.07□□□□□ -1.76
UBC9YDL064W ADE16P54113 591 aaKnown RBP4.07□□□□□ -1.76
UBC9YDL064W REG1Q00816 1014 aa4.07□□□□□ -1.76
UBC9YDL064W SNO4Q04902 237 aa4.07□□□□□ -1.76
UBC9YDL064W YOR389WQ08912 624 aa4.07□□□□□ -1.76
UBC9YDL064W HSP33Q08914 237 aaKnown RBP4.07□□□□□ -1.76
UBC9YDL064W HSP32Q08992 237 aa4.07□□□□□ -1.76
UBC9YDL064W ERG8P24521 451 aa4.06□□□□□ -1.76
UBC9YDL064W DPB3P27344 201 aa4.06□□□□□ -1.76
UBC9YDL064W SSH4P32343 579 aa4.06□□□□□ -1.76
UBC9YDL064W MCM10P32354 571 aa4.06□□□□□ -1.76
UBC9YDL064W NUP120P35729 1037 aa4.06□□□□□ -1.76
UBC9YDL064W TEF4P36008 412 aaKnown RBP4.06□□□□□ -1.76
UBC9YDL064W UME6P39001 836 aa4.06□□□□□ -1.76
UBC9YDL064W RAD26P40352 1085 aa4.06□□□□□ -1.76
UBC9YDL064W CIR1P42940 261 aa4.06□□□□□ -1.76
UBC9YDL064W UBX6P47049 396 aa4.06□□□□□ -1.76
UBC9YDL064W MEP3P53390 489 aa4.06□□□□□ -1.76
UBC9YDL064W YNR061CP53747 219 aa4.06□□□□□ -1.76
UBC9YDL064W YAT1P80235 687 aa4.06□□□□□ -1.76
UBC9YDL064W AAT1Q01802 451 aa4.06□□□□□ -1.76
UBC9YDL064W YPL191CQ08930 360 aa4.06□□□□□ -1.76
UBC9YDL064W SWT1Q12104 458 aa4.06□□□□□ -1.76
UBC9YDL064W ILV2P07342 687 aaKnown RBP4.05□□□□□ -1.76
UBC9YDL064W PCT1P13259 424 aa4.05□□□□□ -1.76
UBC9YDL064W MBR1P23493 339 aa4.05□□□□□ -1.76
UBC9YDL064W LRE1P25579 583 aaKnown RBP4.05□□□□□ -1.76
UBC9YDL064W PTC6P25646 442 aa4.05□□□□□ -1.76
UBC9YDL064W YER010CP40011 234 aa4.05□□□□□ -1.76
UBC9YDL064W YIL161WP40449 235 aaKnown RBP4.05□□□□□ -1.76
UBC9YDL064W DPH1P40487 425 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms