Protein–RNA interactions for Protein: P39001

UME6, Transcriptional regulatory protein UME6, yeastyeast

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UME6P39001 YML009W-BYML009W-B 477 nt19.53■□□□□ 0.72
UME6P39001 NOP1YDL014W 984 nt19.25■□□□□ 0.67
UME6P39001 NSR1YGR159C 1245 nt18.94■□□□□ 0.62
UME6P39001 YKL036CYKL036C 393 nt18.21■□□□□ 0.51
UME6P39001 YJL027CYJL027C 417 nt17.12■□□□□ 0.33
UME6P39001 Q0297Q0297 156 nt16.96■□□□□ 0.31
UME6P39001 SCS3YGL126W 1143 nt16.8■□□□□ 0.28
UME6P39001 SRX1YKL086W 384 nt16.77■□□□□ 0.28
UME6P39001 MDJ1YFL016C 1536 nt16.29■□□□□ 0.2
UME6P39001 YCR051WYCR051W 669 nt15.99■□□□□ 0.15
UME6P39001 YOL085CYOL085C 342 nt15.73■□□□□ 0.11
UME6P39001 SCJ1YMR214W 1134 nt15.58■□□□□ 0.08
UME6P39001 PKP1YIL042C 1185 nt15.44■□□□□ 0.06
UME6P39001 RPP1BYDL130W 321 nt15.23■□□□□ 0.03
UME6P39001 ATS1YAL020C 1002 nt15.19■□□□□ 0.02
UME6P39001 TRN1tP(UGG)A 72 nt14.82□□□□□ -0.04
UME6P39001 SUF9tP(UGG)F 72 nt14.82□□□□□ -0.04
UME6P39001 SUF8tP(UGG)H 72 nt14.82□□□□□ -0.04
UME6P39001 tP(UGG)LtP(UGG)L 72 nt14.82□□□□□ -0.04
UME6P39001 SUF7tP(UGG)M 72 nt14.82□□□□□ -0.04
UME6P39001 tP(UGG)N1tP(UGG)N1 72 nt14.82□□□□□ -0.04
UME6P39001 tP(UGG)N2tP(UGG)N2 72 nt14.82□□□□□ -0.04
UME6P39001 tP(UGG)O1tP(UGG)O1 72 nt14.82□□□□□ -0.04
UME6P39001 SUF11tP(UGG)O2 72 nt14.82□□□□□ -0.04
UME6P39001 CCC1YLR220W 969 nt14.74□□□□□ -0.05
UME6P39001 DBP2YNL112W 1641 nt14.57□□□□□ -0.08
UME6P39001 SCR1SCR1 522 nt14.54□□□□□ -0.08
UME6P39001 PET122YER153C 765 nt14.46□□□□□ -0.09
UME6P39001 tP(UGG)O3tP(UGG)O3 72 nt14.22□□□□□ -0.13
UME6P39001 RTC3YHR087W 336 nt14.17□□□□□ -0.14
UME6P39001 RRN5YLR141W 1092 nt14.13□□□□□ -0.15
UME6P39001 RSB1YOR049C 1065 nt14.03□□□□□ -0.16
UME6P39001 RVS167YDR388W 1449 nt13.97□□□□□ -0.17
UME6P39001 PST2YDR032C 597 nt13.96□□□□□ -0.17
UME6P39001 YER088W-BYER088W-B 147 nt13.84□□□□□ -0.19
UME6P39001 YBR190WYBR190W 312 nt13.77□□□□□ -0.21
UME6P39001 YDJ1YNL064C 1230 nt13.75□□□□□ -0.21
UME6P39001 YKL097CYKL097C 411 nt13.74□□□□□ -0.21
UME6P39001 SHR5YOL110W 714 nt13.55□□□□□ -0.24
UME6P39001 GAR1YHR089C 618 nt13.38□□□□□ -0.27
UME6P39001 SHU1YHL006C 453 nt13.26□□□□□ -0.29
UME6P39001 Q0182Q0182 405 nt13.12□□□□□ -0.31
UME6P39001 YOR139CYOR139C 393 nt13.02□□□□□ -0.33
UME6P39001 DEP1YAL013W 1218 nt12.99□□□□□ -0.33
UME6P39001 YAL037C-BYAL037C-B 975 nt12.91□□□□□ -0.34
UME6P39001 NPL3YDR432W 1245 nt12.89□□□□□ -0.35
UME6P39001 TIR1YER011W 765 nt12.89□□□□□ -0.35
UME6P39001 YNL208WYNL208W 600 nt12.87□□□□□ -0.35
UME6P39001 URN1YPR152C 1398 nt12.84□□□□□ -0.35
UME6P39001 RPN10YHR200W 807 nt12.84□□□□□ -0.35
UME6P39001 SSA1YAL005C 1929 nt12.58□□□□□ -0.39
UME6P39001 YGR021WYGR021W 873 nt12.53□□□□□ -0.4
UME6P39001 OPI9YLR338W 858 nt12.53□□□□□ -0.4
UME6P39001 YOL037CYOL037C 354 nt12.53□□□□□ -0.4
UME6P39001 tM(CAU)CtM(CAU)C 72 nt12.49□□□□□ -0.41
UME6P39001 IMT4tM(CAU)E 72 nt12.49□□□□□ -0.41
UME6P39001 IMT3tM(CAU)J3 72 nt12.49□□□□□ -0.41
UME6P39001 IMT1tM(CAU)O1 72 nt12.49□□□□□ -0.41
UME6P39001 IMT2tM(CAU)P 72 nt12.49□□□□□ -0.41
UME6P39001 SSA3YBL075C 1950 nt12.47□□□□□ -0.41
UME6P39001 MNP1YGL068W 585 nt12.47□□□□□ -0.41
UME6P39001 HOM6YJR139C 1080 nt12.46□□□□□ -0.41
UME6P39001 MOT3YMR070W 1473 nt12.43□□□□□ -0.42
UME6P39001 SRB2YHR041C 633 nt12.41□□□□□ -0.42
UME6P39001 WWM1YFL010C 636 nt12.4□□□□□ -0.42
UME6P39001 SAH1YER043C 1350 nt12.31□□□□□ -0.44
UME6P39001 YJR018WYJR018W 363 nt12.29□□□□□ -0.44
UME6P39001 RKM5YLR137W 1104 nt12.29□□□□□ -0.44
UME6P39001 BSC6YOL137W 1494 nt12.25□□□□□ -0.45
UME6P39001 RPP2BYDR382W 333 nt12.24□□□□□ -0.45
UME6P39001 PUS2YGL063W 1113 nt12.24□□□□□ -0.45
UME6P39001 YFL021C-AYFL021C-A 855 nt12.22□□□□□ -0.45
UME6P39001 PUN1YLR414C 792 nt12.2□□□□□ -0.46
UME6P39001 YLR281CYLR281C 468 nt12.17□□□□□ -0.46
UME6P39001 YJR120WYJR120W 351 nt12.11□□□□□ -0.47
UME6P39001 WHI5YOR083W 888 nt12.06□□□□□ -0.48
UME6P39001 BDH2YAL061W 1254 nt12.03□□□□□ -0.48
UME6P39001 PUT4YOR348C 1884 nt12.03□□□□□ -0.48
UME6P39001 ARE1YCR048W 1833 nt11.99□□□□□ -0.49
UME6P39001 LSM3YLR438C-A 270 nt11.98□□□□□ -0.49
UME6P39001 MRPL8YJL063C 717 nt11.95□□□□□ -0.5
UME6P39001 PTC2YER089C 1395 nt11.94□□□□□ -0.5
UME6P39001 FMP45YDL222C 930 nt11.94□□□□□ -0.5
UME6P39001 YHR049C-AYHR049C-A 297 nt11.87□□□□□ -0.51
UME6P39001 DSK2YMR276W 1122 nt11.87□□□□□ -0.51
UME6P39001 YCH1YGR203W 447 nt11.85□□□□□ -0.51
UME6P39001 IMP2'YIL154C 1041 nt11.84□□□□□ -0.51
UME6P39001 INM2YDR287W 879 nt11.81□□□□□ -0.52
UME6P39001 YPR011CYPR011C 981 nt11.8□□□□□ -0.52
UME6P39001 ADO1YJR105W 1023 nt11.79□□□□□ -0.52
UME6P39001 YBL100CYBL100C 315 nt11.77□□□□□ -0.53
UME6P39001 POA1YBR022W 534 nt11.76□□□□□ -0.53
UME6P39001 YLR236CYLR236C 324 nt11.75□□□□□ -0.53
UME6P39001 TRM9YML014W 840 nt11.75□□□□□ -0.53
UME6P39001 NAB2YGL122C 1578 nt11.72□□□□□ -0.53
UME6P39001 FPR4YLR449W 1179 nt11.7□□□□□ -0.54
UME6P39001 BUD23YCR047C 828 nt11.69□□□□□ -0.54
UME6P39001 UBX6YJL048C 1191 nt11.69□□□□□ -0.54
UME6P39001 YLR154C-GYLR154C-G 150 nt11.69□□□□□ -0.54
UME6P39001 DAL1YIR027C 1383 nt11.67□□□□□ -0.54
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms