RNA–Protein interactions for RNA: ENSMUST00000182709.7

Rnf4-207, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 3,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-207ENSMUST00000182709 Gm20604F8WIA3 75 aa8.94□□□□□ -0.98
Rnf4-207ENSMUST00000182709 Reg3aO09037 175 aa8.93□□□□□ -0.98
Rnf4-207ENSMUST00000182709 1700074P13RikQ9D9G7 251 aa8.93□□□□□ -0.98
Rnf4-207ENSMUST00000182709 A0A286YE49 62 aa8.92□□□□□ -0.98
Rnf4-207ENSMUST00000182709 9230102O04RikA2ASX7 82 aa8.92□□□□□ -0.98
Rnf4-207ENSMUST00000182709 Gm10139O88245 57 aa8.92□□□□□ -0.98
Rnf4-207ENSMUST00000182709 Gm37013Q8K491 104 aa8.92□□□□□ -0.98
Rnf4-207ENSMUST00000182709 Gm28230A0A0A0MQ91 144 aa8.91□□□□□ -0.98
Rnf4-207ENSMUST00000182709 Gm12353A2AGJ4 60 aa8.9□□□□□ -0.99
Rnf4-207ENSMUST00000182709 Phxr4P15974 95 aa8.9□□□□□ -0.99
Rnf4-207ENSMUST00000182709 Odf3bQ5M8M2 238 aa8.9□□□□□ -0.99
Rnf4-207ENSMUST00000182709 Ccdc179J3QM76 67 aa8.89□□□□□ -0.99
Rnf4-207ENSMUST00000182709 Gm27235Q3UW50 83 aa8.88□□□□□ -0.99
Rnf4-207ENSMUST00000182709 Ryr3A2AGL3 4863 aa8.87□□□□□ -0.99
Rnf4-207ENSMUST00000182709 Rpl37aP61514 92 aa8.87□□□□□ -0.99
Rnf4-207ENSMUST00000182709 OxtP35454 125 aa8.86□□□□□ -0.99
Rnf4-207ENSMUST00000182709 Krtap14O08640 167 aa8.85□□□□□ -0.99
Rnf4-207ENSMUST00000182709 NbdyA0A0N4SUI7 68 aa8.83□□□□□ -1
Rnf4-207ENSMUST00000182709 Chtf8P0CG14 533 aa8.81□□□□□ -1
Rnf4-207ENSMUST00000182709 Gpr15lA0A0B4J1N3 78 aa8.81□□□□□ -1
Rnf4-207ENSMUST00000182709 Gm10267M0QWD8 85 aa8.79□□□□□ -1
Rnf4-207ENSMUST00000182709 Q8K1L6 76 aa8.77□□□□□ -1.01
Rnf4-207ENSMUST00000182709 Pkd1O08852 4293 aa8.76□□□□□ -1.01
Rnf4-207ENSMUST00000182709 Defb38Q7TNV7 63 aa8.74□□□□□ -1.01
Rnf4-207ENSMUST00000182709 Defb39Q70KL3 74 aa8.74□□□□□ -1.01
Rnf4-207ENSMUST00000182709 SptssbQ925E8 76 aa8.73□□□□□ -1.01
Rnf4-207ENSMUST00000182709 Lrp1bQ9JI18 4599 aa8.73□□□□□ -1.01
Rnf4-207ENSMUST00000182709 Chchd10Q7TNL9 138 aa8.72□□□□□ -1.01
Rnf4-207ENSMUST00000182709 Igkv3-3A0A140T8Q0 119 aa8.7□□□□□ -1.02
Rnf4-207ENSMUST00000182709 Tnp2P11378 117 aa8.7□□□□□ -1.02
Rnf4-207ENSMUST00000182709 RetnlbQ99P86 105 aa8.7□□□□□ -1.02
Rnf4-207ENSMUST00000182709 1700042G07RikB1AUF7 90 aa8.69□□□□□ -1.02
Rnf4-207ENSMUST00000182709 Gm10160F6Y577 67 aa8.68□□□□□ -1.02
Rnf4-207ENSMUST00000182709 Spaca4Q80ZQ0 127 aa8.67□□□□□ -1.02
Rnf4-207ENSMUST00000182709 ApobE9Q414 4505 aa8.66□□□□□ -1.02
Rnf4-207ENSMUST00000182709 Gm26620Q9CY65 116 aa8.66□□□□□ -1.02
Rnf4-207ENSMUST00000182709 Gm2310J3QNJ2 377 aa8.66□□□□□ -1.02
Rnf4-207ENSMUST00000182709 Gm20661K7N787 53 aa8.66□□□□□ -1.02
Rnf4-207ENSMUST00000182709 Gm3646F6S692 53 aa8.65□□□□□ -1.02
Rnf4-207ENSMUST00000182709 Znf706Q9D115 76 aaKnown RBP8.64□□□□□ -1.03
Rnf4-207ENSMUST00000182709 Wfdc3Q14AE4 130 aa8.63□□□□□ -1.03
Rnf4-207ENSMUST00000182709 Fat1A0A1L1SQU7 4645 aa8.63□□□□□ -1.03
Rnf4-207ENSMUST00000182709 Dnah2P0C6F1 4456 aa8.63□□□□□ -1.03
Rnf4-207ENSMUST00000182709 Gm10643Q3URG9 111 aa8.62□□□□□ -1.03
Rnf4-207ENSMUST00000182709 Cypt14J3QPF7 87 aa8.62□□□□□ -1.03
Rnf4-207ENSMUST00000182709 Hectd4E9Q2E4 4418 aa8.59□□□□□ -1.03
Rnf4-207ENSMUST00000182709 Ndufb1P0DN34 57 aa8.55□□□□□ -1.04
Rnf4-207ENSMUST00000182709 Dync1h1Q9JHU4 4644 aaKnown RBP8.54□□□□□ -1.04
Rnf4-207ENSMUST00000182709 Pkhd1E9PZ36 4059 aa8.52□□□□□ -1.04
Rnf4-207ENSMUST00000182709 Gm16253D3Z167 63 aa8.49□□□□□ -1.05
Rnf4-207ENSMUST00000182709 Lrp1Q91ZX7 4545 aaKnown RBP8.46□□□□□ -1.06
Rnf4-207ENSMUST00000182709 Ndufs5Q99LY9 106 aa8.45□□□□□ -1.06
Rnf4-207ENSMUST00000182709 Ryr1E9PZQ0 5035 aa8.44□□□□□ -1.06
Rnf4-207ENSMUST00000182709 Defb13Q8R2I4 64 aa8.43□□□□□ -1.06
Rnf4-207ENSMUST00000182709 Ryr2E9Q401 4966 aaKnown RBP8.42□□□□□ -1.06
Rnf4-207ENSMUST00000182709 Gm21798J3QNU5 87 aa8.4□□□□□ -1.06
Rnf4-207ENSMUST00000182709 Cypt15B1AXS0 87 aa8.39□□□□□ -1.07
Rnf4-207ENSMUST00000182709 Limd2Q8BGB5 128 aa8.37□□□□□ -1.07
Rnf4-207ENSMUST00000182709 Fat2Q5F226 4351 aa8.35□□□□□ -1.07
Rnf4-207ENSMUST00000182709 Gm9821Q8K076 103 aa8.35□□□□□ -1.07
Rnf4-207ENSMUST00000182709 Uqcr11Q9CPX8 56 aa8.35□□□□□ -1.07
Rnf4-207ENSMUST00000182709 Kmt2cQ8BRH4 4903 aa8.32□□□□□ -1.08
Rnf4-207ENSMUST00000182709 Abca13Q5SSE9 5034 aa8.29□□□□□ -1.08
Rnf4-207ENSMUST00000182709 SacsQ9JLC8 4582 aa8.27□□□□□ -1.09
Rnf4-207ENSMUST00000182709 Pkhd1l1Q80ZA4 4249 aa8.25□□□□□ -1.09
Rnf4-207ENSMUST00000182709 Gm9736A0A1W2P7N1 277 aa8.22□□□□□ -1.09
Rnf4-207ENSMUST00000182709 Gm10999F6Q4M4 69 aa8.18□□□□□ -1.1
Rnf4-207ENSMUST00000182709 Krtap19-5O08632 62 aa8.18□□□□□ -1.1
Rnf4-207ENSMUST00000182709 Mycbp2Q7TPH6 4711 aa8.18□□□□□ -1.1
Rnf4-207ENSMUST00000182709 Defb1P56386 69 aa8.14□□□□□ -1.11
Rnf4-207ENSMUST00000182709 Vps13bQ80TY5 3993 aa8.13□□□□□ -1.11
Rnf4-207ENSMUST00000182709 Q8BGJ3 129 aa8.13□□□□□ -1.11
Rnf4-207ENSMUST00000182709 Fat3Q8BNA6 4555 aa8.09□□□□□ -1.11
Rnf4-207ENSMUST00000182709 2310034C09RikQ9D746 214 aa8.08□□□□□ -1.12
Rnf4-207ENSMUST00000182709 Herc2Q4U2R1 4836 aa8.05□□□□□ -1.12
Rnf4-207ENSMUST00000182709 Kiaa1109A2AAE1 5005 aa8.05□□□□□ -1.12
Rnf4-207ENSMUST00000182709 HydinQ80W93 5154 aa8.05□□□□□ -1.12
Rnf4-207ENSMUST00000182709 Gm11939A2A592 99 aa8□□□□□ -1.13
Rnf4-207ENSMUST00000182709 Gm12216A0A1W2P827 62 aa8□□□□□ -1.13
Rnf4-207ENSMUST00000182709 Gm5965D3Z724 196 aa8□□□□□ -1.13
Rnf4-207ENSMUST00000182709 Dnah8Q91XQ0 4731 aa7.97□□□□□ -1.13
Rnf4-207ENSMUST00000182709 2310079G19RikQ9D6L6 185 aa7.95□□□□□ -1.14
Rnf4-207ENSMUST00000182709 Pla2g10Q9QXX3 151 aa7.94□□□□□ -1.14
Rnf4-207ENSMUST00000182709 PcloQ9QYX7 5068 aa7.93□□□□□ -1.14
Rnf4-207ENSMUST00000182709 Gm4491E0CX42 125 aa7.91□□□□□ -1.14
Rnf4-207ENSMUST00000182709 Krtap3-2Q9D638 99 aa7.91□□□□□ -1.14
Rnf4-207ENSMUST00000182709 Krtap3-3Q9D7P0 99 aa7.91□□□□□ -1.14
Rnf4-207ENSMUST00000182709 Rps29P62274 56 aa7.89□□□□□ -1.15
Rnf4-207ENSMUST00000182709 Krtap15-1Q9QZU5 150 aa7.89□□□□□ -1.15
Rnf4-207ENSMUST00000182709 Gm5767A0A0J9YTU8 78 aa7.84□□□□□ -1.15
Rnf4-207ENSMUST00000182709 Lrp2A2ARV4 4660 aa7.84□□□□□ -1.15
Rnf4-207ENSMUST00000182709 4930507D05RikQ8C9C9 103 aa7.83□□□□□ -1.16
Rnf4-207ENSMUST00000182709 D6Ertd527eA0A0N4SWI3 464 aa7.81□□□□□ -1.16
Rnf4-207ENSMUST00000182709 Gm3880A0A1B0GSB3 72 aa7.78□□□□□ -1.16
Rnf4-207ENSMUST00000182709 Dnhd1D3Z2X2 4750 aa7.75□□□□□ -1.17
Rnf4-207ENSMUST00000182709 Birc6O88738 4882 aa7.74□□□□□ -1.17
Rnf4-207ENSMUST00000182709 A930033H14RikG5E8X6 103 aa7.73□□□□□ -1.17
Rnf4-207ENSMUST00000182709 Gm20537G3UYK7 97 aa7.72□□□□□ -1.17
Rnf4-207ENSMUST00000182709 Rnase13Q5GAM7 153 aa7.65□□□□□ -1.18
Rnf4-207ENSMUST00000182709 CriptO70333 101 aa7.65□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 123.5 ms