RNA–Protein interactions for RNA: ENSMUST00000182709.7

Rnf4-207, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 3,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-207ENSMUST00000182709 NischQ80TM9 1593 aa28.95■■■□□ 2.22
Rnf4-207ENSMUST00000182709 Gm35339A0A140LHH9 1649 aa28.18■■■□□ 2.1
Rnf4-207ENSMUST00000182709 Abcc9P70170 1546 aa27.9■■■□□ 2.06
Rnf4-207ENSMUST00000182709 Abcc8B2RUS7 1588 aa27.52■■■□□ 2
Rnf4-207ENSMUST00000182709 Rhox8Q6VSS7 320 aa27.1■■□□□ 1.93
Rnf4-207ENSMUST00000182709 ScribQ80U72 1612 aa25.89■■□□□ 1.74
Rnf4-207ENSMUST00000182709 Kdm5dQ62240 1548 aa25.4■■□□□ 1.66
Rnf4-207ENSMUST00000182709 Rb1cc1Q9ESK9 1588 aa25.32■■□□□ 1.64
Rnf4-207ENSMUST00000182709 Dcaf1Q80TR8 1506 aa25.26■■□□□ 1.63
Rnf4-207ENSMUST00000182709 Ccdc136Q3TVA9 1136 aa25.24■■□□□ 1.63
Rnf4-207ENSMUST00000182709 NacadQ5SWP3 1504 aa25.18■■□□□ 1.62
Rnf4-207ENSMUST00000182709 Rtl1Q7M732 1744 aa25.1■■□□□ 1.61
Rnf4-207ENSMUST00000182709 Baz1aO88379 1555 aa24.9■■□□□ 1.58
Rnf4-207ENSMUST00000182709 Zcchc6Q5BLK4 1491 aaKnown RBP24.9■■□□□ 1.58
Rnf4-207ENSMUST00000182709 Ccdc180J3QNE4 1664 aa24.78■■□□□ 1.56
Rnf4-207ENSMUST00000182709 Sycp2Q9CUU3 1500 aa24.65■■□□□ 1.54
Rnf4-207ENSMUST00000182709 Trim41Q5NCC3 630 aa24.33■■□□□ 1.49
Rnf4-207ENSMUST00000182709 Crybg2B7ZCC2 1516 aa24.3■■□□□ 1.48
Rnf4-207ENSMUST00000182709 Smarca2Q6DIC0 1577 aa24.26■■□□□ 1.47
Rnf4-207ENSMUST00000182709 BicraF8VPZ9 1578 aa24.19■■□□□ 1.46
Rnf4-207ENSMUST00000182709 Cecr2E9Q2Z1 1453 aa24.16■■□□□ 1.46
Rnf4-207ENSMUST00000182709 Cngb1E1AZ71 1325 aa24.12■■□□□ 1.45
Rnf4-207ENSMUST00000182709 Esf1Q3V1V3 845 aaKnown RBP23.99■■□□□ 1.43
Rnf4-207ENSMUST00000182709 HrcG5E8J6 738 aa23.96■■□□□ 1.43
Rnf4-207ENSMUST00000182709 Ehmt2Q9Z148 1263 aaKnown RBP23.86■■□□□ 1.41
Rnf4-207ENSMUST00000182709 Brd4Q9ESU6 1400 aaKnown RBP23.84■■□□□ 1.41
Rnf4-207ENSMUST00000182709 Gab3Q8BSM5 595 aa23.72■■□□□ 1.39
Rnf4-207ENSMUST00000182709 Synj1Q8CHC4 1574 aa23.72■■□□□ 1.39
Rnf4-207ENSMUST00000182709 Rpgrip1Q9EPQ2 1331 aa23.71■■□□□ 1.39
Rnf4-207ENSMUST00000182709 Chic1Q8CBW7 227 aa23.71■■□□□ 1.39
Rnf4-207ENSMUST00000182709 CftrP26361 1476 aa23.6■■□□□ 1.37
Rnf4-207ENSMUST00000182709 Smarca4Q3TKT4 1613 aaKnown RBP23.49■■□□□ 1.35
Rnf4-207ENSMUST00000182709 Rsf1E9PWW9 1441 aaKnown RBP23.48■■□□□ 1.35
Rnf4-207ENSMUST00000182709 Golga3P55937 1487 aa23.46■■□□□ 1.35
Rnf4-207ENSMUST00000182709 Ccdc88bQ4QRL3 1481 aa23.42■■□□□ 1.34
Rnf4-207ENSMUST00000182709 Cep164Q5DU05 1446 aa23.37■■□□□ 1.33
Rnf4-207ENSMUST00000182709 Cttnbp2B9EJA2 1648 aa23.31■■□□□ 1.32
Rnf4-207ENSMUST00000182709 Iqgap2Q3UQ44 1575 aa23.29■■□□□ 1.32
Rnf4-207ENSMUST00000182709 Atad2bE9Q166 1460 aaKnown RBP23.26■■□□□ 1.31
Rnf4-207ENSMUST00000182709 Pds5bQ4VA53 1446 aaKnown RBP23.25■■□□□ 1.31
Rnf4-207ENSMUST00000182709 Acin1Q9JIX8 1338 aaKnown RBP23.1■■□□□ 1.29
Rnf4-207ENSMUST00000182709 Il27Q8K3I6 234 aa23.1■■□□□ 1.29
Rnf4-207ENSMUST00000182709 Cc2d2aQ8CFW7 1633 aa23.05■■□□□ 1.28
Rnf4-207ENSMUST00000182709 Top2bQ64511 1612 aa23.02■■□□□ 1.28
Rnf4-207ENSMUST00000182709 Myt1lP97500 1187 aa22.98■■□□□ 1.27
Rnf4-207ENSMUST00000182709 Frmpd1A2AKB4 1549 aa22.95■■□□□ 1.26
Rnf4-207ENSMUST00000182709 Npm2Q80W85 207 aa22.93■■□□□ 1.26
Rnf4-207ENSMUST00000182709 Ercc6F8VPZ5 1481 aa22.89■■□□□ 1.26
Rnf4-207ENSMUST00000182709 Fmn1Q05860 1466 aa22.84■■□□□ 1.25
Rnf4-207ENSMUST00000182709 Wdr62Q3U3T8 1523 aa22.82■■□□□ 1.24
Rnf4-207ENSMUST00000182709 Kif15Q6P9L6 1387 aa22.81■■□□□ 1.24
Rnf4-207ENSMUST00000182709 Ubl4bQ9CQ84 188 aa22.78■■□□□ 1.24
Rnf4-207ENSMUST00000182709 Pcgf6Q99NA9 353 aa22.69■■□□□ 1.22
Rnf4-207ENSMUST00000182709 Dnajc5bQ9CQ94 199 aa22.64■■□□□ 1.22
Rnf4-207ENSMUST00000182709 Zeb1Q64318 1117 aa22.62■■□□□ 1.21
Rnf4-207ENSMUST00000182709 Top2aQ01320 1528 aaKnown RBP22.62■■□□□ 1.21
Rnf4-207ENSMUST00000182709 Rapgef2Q8CHG7 1496 aa22.58■■□□□ 1.2
Rnf4-207ENSMUST00000182709 Phldb1Q6PDH0 1371 aaKnown RBP22.56■■□□□ 1.2
Rnf4-207ENSMUST00000182709 Npm1Q61937 292 aaKnown RBP22.54■■□□□ 1.2
Rnf4-207ENSMUST00000182709 UbtfP25976 765 aaKnown RBP22.49■■□□□ 1.19
Rnf4-207ENSMUST00000182709 Unc13aQ4KUS2 1712 aa22.49■■□□□ 1.19
Rnf4-207ENSMUST00000182709 Cep162Q6ZQ06 1403 aa22.48■■□□□ 1.19
Rnf4-207ENSMUST00000182709 Thoc2B1AZI6 1594 aaKnown RBP22.45■■□□□ 1.19
Rnf4-207ENSMUST00000182709 Cux2P70298 1426 aa22.45■■□□□ 1.19
Rnf4-207ENSMUST00000182709 Ap3b1Q9Z1T1 1105 aa22.44■■□□□ 1.18
Rnf4-207ENSMUST00000182709 PtprkP35822 1457 aa22.44■■□□□ 1.18
Rnf4-207ENSMUST00000182709 Lamc3Q9R0B6 1581 aa22.43■■□□□ 1.18
Rnf4-207ENSMUST00000182709 TnnQ80Z71 1560 aa22.4■■□□□ 1.18
Rnf4-207ENSMUST00000182709 Ccdc18Q640L5 1455 aa22.36■■□□□ 1.17
Rnf4-207ENSMUST00000182709 Plekhg3Q4VAC9 1341 aa22.35■■□□□ 1.17
Rnf4-207ENSMUST00000182709 Mier1Q5UAK0 511 aa22.3■■□□□ 1.16
Rnf4-207ENSMUST00000182709 Camsap1A2AHC3 1581 aa22.29■■□□□ 1.16
Rnf4-207ENSMUST00000182709 Clip1Q922J3 1391 aa22.25■■□□□ 1.15
Rnf4-207ENSMUST00000182709 Arhgap35Q91YM2 1499 aa22.18■■□□□ 1.14
Rnf4-207ENSMUST00000182709 Grin2bQ01097 1482 aa22.17■■□□□ 1.14
Rnf4-207ENSMUST00000182709 Fam135aQ6NS59 1506 aa22.16■■□□□ 1.14
Rnf4-207ENSMUST00000182709 LrpprcQ6PB66 1392 aaKnown RBP22.14■■□□□ 1.13
Rnf4-207ENSMUST00000182709 Shroom4Q1W617 1475 aa22.14■■□□□ 1.13
Rnf4-207ENSMUST00000182709 Supt5hO55201 1082 aaKnown RBP22.12■■□□□ 1.13
Rnf4-207ENSMUST00000182709 Baz1bQ9Z277 1479 aa22.11■■□□□ 1.13
Rnf4-207ENSMUST00000182709 NrkQ9R0G8 1455 aa22.08■■□□□ 1.12
Rnf4-207ENSMUST00000182709 Dhx29Q6PGC1 1365 aaKnown RBP22.05■■□□□ 1.12
Rnf4-207ENSMUST00000182709 Setd5Q5XJV7 1441 aa22.04■■□□□ 1.12
Rnf4-207ENSMUST00000182709 Duox2A2AQ99 1517 aa22.01■■□□□ 1.11
Rnf4-207ENSMUST00000182709 Lmod2Q3UHZ5 550 aa22■■□□□ 1.11
Rnf4-207ENSMUST00000182709 PogzQ8BZH4 1409 aaKnown RBP21.98■■□□□ 1.11
Rnf4-207ENSMUST00000182709 Eif4g1Q6NZJ6 1600 aaKnown RBP21.97■■□□□ 1.11
Rnf4-207ENSMUST00000182709 Eea1Q8BL66 1411 aa21.96■■□□□ 1.11
Rnf4-207ENSMUST00000182709 Mroh2bQ7M6Y6 1581 aa21.93■■□□□ 1.1
Rnf4-207ENSMUST00000182709 Mrc2Q64449 1479 aa21.93■■□□□ 1.1
Rnf4-207ENSMUST00000182709 Rad54l2Q99NG0 1466 aa21.93■■□□□ 1.1
Rnf4-207ENSMUST00000182709 Efcab5A0JP43 1406 aa21.91■■□□□ 1.1
Rnf4-207ENSMUST00000182709 Neurod1Q60867 357 aa21.88■■□□□ 1.09
Rnf4-207ENSMUST00000182709 Arap1Q4LDD4 1452 aa21.87■■□□□ 1.09
Rnf4-207ENSMUST00000182709 Kif21aQ9QXL2 1672 aa21.81■■□□□ 1.08
Rnf4-207ENSMUST00000182709 BlmO88700 1416 aa21.79■■□□□ 1.08
Rnf4-207ENSMUST00000182709 NefmP08553 848 aa21.79■■□□□ 1.08
Rnf4-207ENSMUST00000182709 Samd9lQ69Z37 1561 aa21.79■■□□□ 1.08
Rnf4-207ENSMUST00000182709 Map3k1P53349 1493 aa21.78■■□□□ 1.08
Rnf4-207ENSMUST00000182709 Plb1Q3TTY0 1478 aa21.75■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms