RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Gm10139O88245 57 aa8.24□□□□□ -1.09
Rnf4-204ENSMUST00000182047 Gm10642Q3TWM1 71 aa8.23□□□□□ -1.09
Rnf4-204ENSMUST00000182047 Pkd1O08852 4293 aa8.23□□□□□ -1.09
Rnf4-204ENSMUST00000182047 Dnah2P0C6F1 4456 aa8.22□□□□□ -1.09
Rnf4-204ENSMUST00000182047 Krtap10-10A0A1W2P7T6 217 aa8.2□□□□□ -1.1
Rnf4-204ENSMUST00000182047 Adm2Q7TNK8 150 aa8.2□□□□□ -1.1
Rnf4-204ENSMUST00000182047 Gm2696A0A1W2P709 240 aa8.18□□□□□ -1.1
Rnf4-204ENSMUST00000182047 Chtf8P0CG14 533 aa8.18□□□□□ -1.1
Rnf4-204ENSMUST00000182047 Igkv3-5A0A140T8M6 119 aa8.16□□□□□ -1.1
Rnf4-204ENSMUST00000182047 Ryr3A2AGL3 4863 aa8.15□□□□□ -1.1
Rnf4-204ENSMUST00000182047 Krtap13O88375 197 aa8.15□□□□□ -1.1
Rnf4-204ENSMUST00000182047 Gm27235Q3UW50 83 aa8.15□□□□□ -1.1
Rnf4-204ENSMUST00000182047 OxtP35454 125 aa8.14□□□□□ -1.11
Rnf4-204ENSMUST00000182047 NbdyA0A0N4SUI7 68 aa8.13□□□□□ -1.11
Rnf4-204ENSMUST00000182047 ApobE9Q414 4505 aa8.13□□□□□ -1.11
Rnf4-204ENSMUST00000182047 Chchd10Q7TNL9 138 aa8.13□□□□□ -1.11
Rnf4-204ENSMUST00000182047 Gpr15lA0A0B4J1N3 78 aa8.12□□□□□ -1.11
Rnf4-204ENSMUST00000182047 Hectd4E9Q2E4 4418 aa8.12□□□□□ -1.11
Rnf4-204ENSMUST00000182047 Krtap14O08640 167 aa8.11□□□□□ -1.11
Rnf4-204ENSMUST00000182047 Anapc11Q9CPX9 84 aa8.1□□□□□ -1.11
Rnf4-204ENSMUST00000182047 Lrp1bQ9JI18 4599 aa8.1□□□□□ -1.11
Rnf4-204ENSMUST00000182047 Fat1A0A1L1SQU7 4645 aa8.09□□□□□ -1.11
Rnf4-204ENSMUST00000182047 Q8K1L6 76 aa8.08□□□□□ -1.12
Rnf4-204ENSMUST00000182047 Phxr4P15974 95 aa8.08□□□□□ -1.12
Rnf4-204ENSMUST00000182047 Tnp2P11378 117 aa8.06□□□□□ -1.12
Rnf4-204ENSMUST00000182047 Gm2310J3QNJ2 377 aa8.06□□□□□ -1.12
Rnf4-204ENSMUST00000182047 Gm10160F6Y577 67 aa8.03□□□□□ -1.12
Rnf4-204ENSMUST00000182047 Dync1h1Q9JHU4 4644 aaKnown RBP8.03□□□□□ -1.12
Rnf4-204ENSMUST00000182047 Pkhd1E9PZ36 4059 aa8.02□□□□□ -1.12
Rnf4-204ENSMUST00000182047 9230102O04RikA2ASX7 82 aa8.02□□□□□ -1.12
Rnf4-204ENSMUST00000182047 4933415A04RikQ9D443 101 aa8.02□□□□□ -1.12
Rnf4-204ENSMUST00000182047 Igkv3-3A0A140T8Q0 119 aa8.01□□□□□ -1.13
Rnf4-204ENSMUST00000182047 SptssbQ925E8 76 aa8□□□□□ -1.13
Rnf4-204ENSMUST00000182047 Gm20604F8WIA3 75 aa7.99□□□□□ -1.13
Rnf4-204ENSMUST00000182047 Defb39Q70KL3 74 aa7.99□□□□□ -1.13
Rnf4-204ENSMUST00000182047 Gm20661K7N787 53 aa7.97□□□□□ -1.13
Rnf4-204ENSMUST00000182047 Sox16Q62247 57 aa7.94□□□□□ -1.14
Rnf4-204ENSMUST00000182047 Znf706Q9D115 76 aaKnown RBP7.94□□□□□ -1.14
Rnf4-204ENSMUST00000182047 Cypt14J3QPF7 87 aa7.93□□□□□ -1.14
Rnf4-204ENSMUST00000182047 Ccdc179J3QM76 67 aa7.92□□□□□ -1.14
Rnf4-204ENSMUST00000182047 Fat2Q5F226 4351 aa7.89□□□□□ -1.15
Rnf4-204ENSMUST00000182047 Ryr2E9Q401 4966 aaKnown RBP7.88□□□□□ -1.15
Rnf4-204ENSMUST00000182047 Wfdc3Q14AE4 130 aa7.88□□□□□ -1.15
Rnf4-204ENSMUST00000182047 Sec61gP60060 68 aa7.87□□□□□ -1.15
Rnf4-204ENSMUST00000182047 Defb13Q8R2I4 64 aa7.87□□□□□ -1.15
Rnf4-204ENSMUST00000182047 Gm21798J3QNU5 87 aa7.85□□□□□ -1.15
Rnf4-204ENSMUST00000182047 Gm16253D3Z167 63 aa7.82□□□□□ -1.16
Rnf4-204ENSMUST00000182047 Spaca4Q80ZQ0 127 aa7.82□□□□□ -1.16
Rnf4-204ENSMUST00000182047 RetnlbQ99P86 105 aa7.8□□□□□ -1.16
Rnf4-204ENSMUST00000182047 SacsQ9JLC8 4582 aa7.79□□□□□ -1.16
Rnf4-204ENSMUST00000182047 Gm3646F6S692 53 aa7.78□□□□□ -1.16
Rnf4-204ENSMUST00000182047 Ndufb1P0DN34 57 aa7.76□□□□□ -1.17
Rnf4-204ENSMUST00000182047 Kmt2cQ8BRH4 4903 aa7.75□□□□□ -1.17
Rnf4-204ENSMUST00000182047 Lrp1Q91ZX7 4545 aaKnown RBP7.75□□□□□ -1.17
Rnf4-204ENSMUST00000182047 Ndufs5Q99LY9 106 aa7.74□□□□□ -1.17
Rnf4-204ENSMUST00000182047 Gm10999F6Q4M4 69 aa7.73□□□□□ -1.17
Rnf4-204ENSMUST00000182047 Defb1P56386 69 aa7.72□□□□□ -1.17
Rnf4-204ENSMUST00000182047 Cypt15B1AXS0 87 aa7.71□□□□□ -1.18
Rnf4-204ENSMUST00000182047 Pkhd1l1Q80ZA4 4249 aa7.71□□□□□ -1.18
Rnf4-204ENSMUST00000182047 Ryr1E9PZQ0 5035 aa7.68□□□□□ -1.18
Rnf4-204ENSMUST00000182047 Gm26620Q9CY65 116 aa7.68□□□□□ -1.18
Rnf4-204ENSMUST00000182047 1700042G07RikB1AUF7 90 aa7.67□□□□□ -1.18
Rnf4-204ENSMUST00000182047 Vps13bQ80TY5 3993 aa7.67□□□□□ -1.18
Rnf4-204ENSMUST00000182047 Q8BGJ3 129 aa7.63□□□□□ -1.19
Rnf4-204ENSMUST00000182047 Abca13Q5SSE9 5034 aa7.6□□□□□ -1.19
Rnf4-204ENSMUST00000182047 Limd2Q8BGB5 128 aa7.6□□□□□ -1.19
Rnf4-204ENSMUST00000182047 Uqcr11Q9CPX8 56 aa7.6□□□□□ -1.19
Rnf4-204ENSMUST00000182047 Gm10643Q3URG9 111 aa7.58□□□□□ -1.2
Rnf4-204ENSMUST00000182047 2310034C09RikQ9D746 214 aa7.58□□□□□ -1.2
Rnf4-204ENSMUST00000182047 Fat3Q8BNA6 4555 aa7.57□□□□□ -1.2
Rnf4-204ENSMUST00000182047 Krtap19-5O08632 62 aa7.53□□□□□ -1.2
Rnf4-204ENSMUST00000182047 Dnah8Q91XQ0 4731 aa7.52□□□□□ -1.21
Rnf4-204ENSMUST00000182047 Mycbp2Q7TPH6 4711 aa7.5□□□□□ -1.21
Rnf4-204ENSMUST00000182047 Gm9821Q8K076 103 aa7.45□□□□□ -1.22
Rnf4-204ENSMUST00000182047 Gm9736A0A1W2P7N1 277 aa7.44□□□□□ -1.22
Rnf4-204ENSMUST00000182047 2310079G19RikQ9D6L6 185 aa7.4□□□□□ -1.23
Rnf4-204ENSMUST00000182047 Herc2Q4U2R1 4836 aa7.39□□□□□ -1.23
Rnf4-204ENSMUST00000182047 Gm11939A2A592 99 aa7.39□□□□□ -1.23
Rnf4-204ENSMUST00000182047 Rps29P62274 56 aa7.38□□□□□ -1.23
Rnf4-204ENSMUST00000182047 Kiaa1109A2AAE1 5005 aa7.37□□□□□ -1.23
Rnf4-204ENSMUST00000182047 HydinQ80W93 5154 aa7.35□□□□□ -1.23
Rnf4-204ENSMUST00000182047 Krtap3-2Q9D638 99 aa7.33□□□□□ -1.24
Rnf4-204ENSMUST00000182047 Krtap3-3Q9D7P0 99 aa7.33□□□□□ -1.24
Rnf4-204ENSMUST00000182047 Gm4491E0CX42 125 aa7.32□□□□□ -1.24
Rnf4-204ENSMUST00000182047 4930507D05RikQ8C9C9 103 aa7.32□□□□□ -1.24
Rnf4-204ENSMUST00000182047 D6Ertd527eA0A0N4SWI3 464 aa7.28□□□□□ -1.24
Rnf4-204ENSMUST00000182047 Birc6O88738 4882 aa7.26□□□□□ -1.25
Rnf4-204ENSMUST00000182047 Gm5965D3Z724 196 aa7.24□□□□□ -1.25
Rnf4-204ENSMUST00000182047 Gm3880A0A1B0GSB3 72 aa7.21□□□□□ -1.26
Rnf4-204ENSMUST00000182047 A930033H14RikG5E8X6 103 aa7.21□□□□□ -1.26
Rnf4-204ENSMUST00000182047 Dnhd1D3Z2X2 4750 aa7.2□□□□□ -1.26
Rnf4-204ENSMUST00000182047 Gm5767A0A0J9YTU8 78 aa7.19□□□□□ -1.26
Rnf4-204ENSMUST00000182047 PcloQ9QYX7 5068 aa7.19□□□□□ -1.26
Rnf4-204ENSMUST00000182047 Lrp2A2ARV4 4660 aa7.15□□□□□ -1.27
Rnf4-204ENSMUST00000182047 Gm20537G3UYK7 97 aa7.12□□□□□ -1.27
Rnf4-204ENSMUST00000182047 Krtap15-1Q9QZU5 150 aa7.11□□□□□ -1.27
Rnf4-204ENSMUST00000182047 CriptO70333 101 aa7.1□□□□□ -1.27
Rnf4-204ENSMUST00000182047 Pla2g10Q9QXX3 151 aa7.08□□□□□ -1.28
Rnf4-204ENSMUST00000182047 Gm12216A0A1W2P827 62 aa7.05□□□□□ -1.28
Rnf4-204ENSMUST00000182047 Cox6b2Q80ZN9 88 aa7.04□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms