RNA–Protein interactions for RNA: ENSMUST00000162244.7

Cpsf4-207, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Cpsf4, Length 1,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-207ENSMUST00000162244 Ormdl1Q921I0 153 aa9.66□□□□□ -0.86
Cpsf4-207ENSMUST00000162244 C130032M10RikQ8C888 123 aa9.64□□□□□ -0.87
Cpsf4-207ENSMUST00000162244 Cdip1Q9DB75 208 aa9.64□□□□□ -0.87
Cpsf4-207ENSMUST00000162244 Cypt15B1AXS0 87 aa9.63□□□□□ -0.87
Cpsf4-207ENSMUST00000162244 Gm7735D3YX18 52 aa9.63□□□□□ -0.87
Cpsf4-207ENSMUST00000162244 Gm37013Q8K491 104 aa9.63□□□□□ -0.87
Cpsf4-207ENSMUST00000162244 Gm9821Q8K076 103 aa9.61□□□□□ -0.87
Cpsf4-207ENSMUST00000162244 Gm9789Q8BIG3 52 aa9.6□□□□□ -0.87
Cpsf4-207ENSMUST00000162244 Defa21Q8C1P2 93 aa9.58□□□□□ -0.88
Cpsf4-207ENSMUST00000162244 Gm26620Q9CY65 116 aa9.58□□□□□ -0.88
Cpsf4-207ENSMUST00000162244 Gm11939A2A592 99 aa9.56□□□□□ -0.88
Cpsf4-207ENSMUST00000162244 Reg3aO09037 175 aa9.52□□□□□ -0.88
Cpsf4-207ENSMUST00000162244 Ush2AQ2QI47 5193 aa9.52□□□□□ -0.89
Cpsf4-207ENSMUST00000162244 Igkv3-3A0A140T8Q0 119 aa9.51□□□□□ -0.89
Cpsf4-207ENSMUST00000162244 Ubl5Q9EPV8 73 aa9.51□□□□□ -0.89
Cpsf4-207ENSMUST00000162244 Lyrm7Q9DA03 104 aa9.5□□□□□ -0.89
Cpsf4-207ENSMUST00000162244 BikO70337 150 aa9.47□□□□□ -0.89
Cpsf4-207ENSMUST00000162244 MplkipQ9D011 178 aa9.47□□□□□ -0.89
Cpsf4-207ENSMUST00000162244 Krtap15-1Q9QZU5 150 aa9.46□□□□□ -0.9
Cpsf4-207ENSMUST00000162244 Sec61bQ9CQS8 96 aaKnown RBP9.42□□□□□ -0.9
Cpsf4-207ENSMUST00000162244 Scgb1b2O35176 93 aa9.4□□□□□ -0.9
Cpsf4-207ENSMUST00000162244 Gtf2h5Q8K2X8 71 aa9.38□□□□□ -0.91
Cpsf4-207ENSMUST00000162244 Defb13Q8R2I4 64 aa9.38□□□□□ -0.91
Cpsf4-207ENSMUST00000162244 Hmcn2A2AJ76 5100 aa9.37□□□□□ -0.91
Cpsf4-207ENSMUST00000162244 Igkv8-19A0A0G2JFN8 121 aa9.37□□□□□ -0.91
Cpsf4-207ENSMUST00000162244 Trav3-1Q5R1I8 114 aa9.35□□□□□ -0.91
Cpsf4-207ENSMUST00000162244 Rpl37Q9D823 97 aa9.35□□□□□ -0.91
Cpsf4-207ENSMUST00000162244 Ubr4A2AN08 5180 aa9.35□□□□□ -0.91
Cpsf4-207ENSMUST00000162244 4932415D10RikA0A1W2P6U8 4986 aa9.31□□□□□ -0.92
Cpsf4-207ENSMUST00000162244 Pxt1Q8K459 51 aa9.3□□□□□ -0.92
Cpsf4-207ENSMUST00000162244 Gm10267M0QWD8 85 aa9.28□□□□□ -0.92
Cpsf4-207ENSMUST00000162244 Tmem254aP0DN89 123 aa9.28□□□□□ -0.92
Cpsf4-207ENSMUST00000162244 Tmem254bP0DN90 123 aa9.28□□□□□ -0.92
Cpsf4-207ENSMUST00000162244 Tmem254cP0DN91 123 aa9.28□□□□□ -0.92
Cpsf4-207ENSMUST00000162244 2310057N15RikQ9D6T8 200 aa9.25□□□□□ -0.93
Cpsf4-207ENSMUST00000162244 Prr15lQ8JZM2 100 aa9.22□□□□□ -0.93
Cpsf4-207ENSMUST00000162244 7530416G11RikJ3QJX6 159 aa9.2□□□□□ -0.94
Cpsf4-207ENSMUST00000162244 Apoc4Q61268 124 aa9.2□□□□□ -0.94
Cpsf4-207ENSMUST00000162244 Rnase13Q5GAM7 153 aa9.16□□□□□ -0.94
Cpsf4-207ENSMUST00000162244 A0A286YE49 62 aa9.15□□□□□ -0.94
Cpsf4-207ENSMUST00000162244 Samd13D3YUG0 102 aa9.15□□□□□ -0.94
Cpsf4-207ENSMUST00000162244 Hist1h4aP62806 103 aaKnown RBP9.15□□□□□ -0.94
Cpsf4-207ENSMUST00000162244 2310034C09RikQ9D746 214 aa9.14□□□□□ -0.95
Cpsf4-207ENSMUST00000162244 Krtap1-3A2A588 173 aa9.09□□□□□ -0.95
Cpsf4-207ENSMUST00000162244 Naa38Q9D2U5 125 aa9.08□□□□□ -0.96
Cpsf4-207ENSMUST00000162244 Krtap3-2Q9D638 99 aa9.05□□□□□ -0.96
Cpsf4-207ENSMUST00000162244 Krtap3-3Q9D7P0 99 aa9.05□□□□□ -0.96
Cpsf4-207ENSMUST00000162244 Spink8Q09TK9 105 aa9.04□□□□□ -0.96
Cpsf4-207ENSMUST00000162244 Fam240bJ3QMB3 78 aa9.01□□□□□ -0.97
Cpsf4-207ENSMUST00000162244 Bud31Q6PGH1 103 aa9.01□□□□□ -0.97
Cpsf4-207ENSMUST00000162244 Gm28539A0A087WSL9 92 aa9□□□□□ -0.97
Cpsf4-207ENSMUST00000162244 Crct1Q6PAI5 102 aa8.99□□□□□ -0.97
Cpsf4-207ENSMUST00000162244 Gm11562A0PK51 136 aa8.99□□□□□ -0.97
Cpsf4-207ENSMUST00000162244 Gm4491E0CX42 125 aa8.97□□□□□ -0.97
Cpsf4-207ENSMUST00000162244 Fam229aB2KGE5 128 aa8.94□□□□□ -0.98
Cpsf4-207ENSMUST00000162244 Ndufc1Q9CQY9 76 aa8.93□□□□□ -0.98
Cpsf4-207ENSMUST00000162244 1700074P13RikQ9D9G7 251 aa8.93□□□□□ -0.98
Cpsf4-207ENSMUST00000162244 Gm17416Q30KP4 66 aa8.92□□□□□ -0.98
Cpsf4-207ENSMUST00000162244 Gm45213A0A0U1RNZ6 101 aa8.9□□□□□ -0.98
Cpsf4-207ENSMUST00000162244 ZanO88799 5376 aa8.88□□□□□ -0.99
Cpsf4-207ENSMUST00000162244 BatfO35284 125 aa8.88□□□□□ -0.99
Cpsf4-207ENSMUST00000162244 Fam229bQ8CF36 80 aa8.86□□□□□ -0.99
Cpsf4-207ENSMUST00000162244 9230102O04RikA2ASX7 82 aa8.86□□□□□ -0.99
Cpsf4-207ENSMUST00000162244 Krtap16-3Q8C1I6 86 aa8.86□□□□□ -0.99
Cpsf4-207ENSMUST00000162244 LorP18165 486 aa8.85□□□□□ -0.99
Cpsf4-207ENSMUST00000162244 Krtap19-1Q925H2 87 aa8.83□□□□□ -1
Cpsf4-207ENSMUST00000162244 Krtap19-3Q925H6 87 aa8.82□□□□□ -1
Cpsf4-207ENSMUST00000162244 1700042G07RikB1AUF7 90 aa8.81□□□□□ -1
Cpsf4-207ENSMUST00000162244 Q8BGJ3 129 aa8.8□□□□□ -1
Cpsf4-207ENSMUST00000162244 Gm10999F6Q4M4 69 aa8.78□□□□□ -1
Cpsf4-207ENSMUST00000162244 Fat4Q2PZL6 4981 aa8.78□□□□□ -1
Cpsf4-207ENSMUST00000162244 Chtf8P0CG14 533 aa8.77□□□□□ -1.01
Cpsf4-207ENSMUST00000162244 Atp5eP56382 52 aa8.76□□□□□ -1.01
Cpsf4-207ENSMUST00000162244 Gm19402J3QJV4 266 aa8.7□□□□□ -1.02
Cpsf4-207ENSMUST00000162244 Rnf213E9Q555 5152 aaKnown RBP8.7□□□□□ -1.02
Cpsf4-207ENSMUST00000162244 Gm10318A0A1W2P728 225 aa8.69□□□□□ -1.02
Cpsf4-207ENSMUST00000162244 4930507D05RikQ8C9C9 103 aa8.69□□□□□ -1.02
Cpsf4-207ENSMUST00000162244 Defb38Q7TNV7 63 aa8.68□□□□□ -1.02
Cpsf4-207ENSMUST00000162244 Atox1O08997 68 aaKnown RBP8.66□□□□□ -1.02
Cpsf4-207ENSMUST00000162244 Krtap1-4Q3V2D6 188 aa8.65□□□□□ -1.02
Cpsf4-207ENSMUST00000162244 4930518I15RikQ3V2W7 57 aa8.62□□□□□ -1.03
Cpsf4-207ENSMUST00000162244 Krtap13-1Q8K198 168 aa8.59□□□□□ -1.03
Cpsf4-207ENSMUST00000162244 2210017I01RikA0A0A6YVV1 95 aa8.58□□□□□ -1.04
Cpsf4-207ENSMUST00000162244 Gm10160F6Y577 67 aa8.57□□□□□ -1.04
Cpsf4-207ENSMUST00000162244 Gm21798J3QNU5 87 aa8.56□□□□□ -1.04
Cpsf4-207ENSMUST00000162244 Serp2Q6TAW2 65 aa8.55□□□□□ -1.04
Cpsf4-207ENSMUST00000162244 Coa6Q8BGD8 79 aa8.53□□□□□ -1.04
Cpsf4-207ENSMUST00000162244 2310079G19RikQ9D6L6 185 aa8.53□□□□□ -1.04
Cpsf4-207ENSMUST00000162244 Gm10061D3Z714 54 aa8.52□□□□□ -1.05
Cpsf4-207ENSMUST00000162244 B230307C23RikQ8BLB2 64 aa8.52□□□□□ -1.05
Cpsf4-207ENSMUST00000162244 Anapc13Q8R034 74 aa8.49□□□□□ -1.05
Cpsf4-207ENSMUST00000162244 Spint4Q9D263 159 aa8.49□□□□□ -1.05
Cpsf4-207ENSMUST00000162244 Krtap1-5A2A590 122 aa8.47□□□□□ -1.05
Cpsf4-207ENSMUST00000162244 Gm10643Q3URG9 111 aa8.47□□□□□ -1.05
Cpsf4-207ENSMUST00000162244 Krtap4-2B1AQ85 167 aa8.45□□□□□ -1.06
Cpsf4-207ENSMUST00000162244 SptssbQ925E8 76 aa8.32□□□□□ -1.08
Cpsf4-207ENSMUST00000162244 SspoQ8CG65 4998 aa8.32□□□□□ -1.08
Cpsf4-207ENSMUST00000162244 Defb1P56386 69 aa8.3□□□□□ -1.08
Cpsf4-207ENSMUST00000162244 Krtap3-1A2A591 98 aa8.26□□□□□ -1.09
Cpsf4-207ENSMUST00000162244 Gm11569B1AQB1 180 aa8.26□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms