RNA–Protein interactions for RNA: ENSMUST00000162244.7

Cpsf4-207, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Cpsf4, Length 1,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-207ENSMUST00000162244 Gm35339A0A140LHH9 1649 aa38.17■■■■□ 3.7
Cpsf4-207ENSMUST00000162244 NischQ80TM9 1593 aa37.92■■■■□ 3.66
Cpsf4-207ENSMUST00000162244 Abcc9P70170 1546 aa36.69■■■■□ 3.46
Cpsf4-207ENSMUST00000162244 Abcc8B2RUS7 1588 aa36.54■■■■□ 3.44
Cpsf4-207ENSMUST00000162244 ScribQ80U72 1612 aa34.92■■■■□ 3.18
Cpsf4-207ENSMUST00000162244 NacadQ5SWP3 1504 aa34.06■■■■□ 3.04
Cpsf4-207ENSMUST00000162244 Kdm5dQ62240 1548 aa33.93■■■■□ 3.02
Cpsf4-207ENSMUST00000162244 Dcaf1Q80TR8 1506 aa33.81■■■■□ 3
Cpsf4-207ENSMUST00000162244 Sycp2Q9CUU3 1500 aa33.33■■■□□ 2.93
Cpsf4-207ENSMUST00000162244 Rhox8Q6VSS7 320 aa33.24■■■□□ 2.91
Cpsf4-207ENSMUST00000162244 Rb1cc1Q9ESK9 1588 aa33.05■■■□□ 2.88
Cpsf4-207ENSMUST00000162244 BicraF8VPZ9 1578 aa32.71■■■□□ 2.83
Cpsf4-207ENSMUST00000162244 Ccdc180J3QNE4 1664 aa32.66■■■□□ 2.82
Cpsf4-207ENSMUST00000162244 Baz1aO88379 1555 aa32.64■■■□□ 2.82
Cpsf4-207ENSMUST00000162244 Crybg2B7ZCC2 1516 aa32.56■■■□□ 2.8
Cpsf4-207ENSMUST00000162244 Zcchc6Q5BLK4 1491 aaKnown RBP32.15■■■□□ 2.74
Cpsf4-207ENSMUST00000162244 Pds5bQ4VA53 1446 aaKnown RBP31.93■■■□□ 2.7
Cpsf4-207ENSMUST00000162244 Smarca2Q6DIC0 1577 aa31.68■■■□□ 2.66
Cpsf4-207ENSMUST00000162244 Atad2bE9Q166 1460 aaKnown RBP31.65■■■□□ 2.66
Cpsf4-207ENSMUST00000162244 Smarca4Q3TKT4 1613 aaKnown RBP31.47■■■□□ 2.63
Cpsf4-207ENSMUST00000162244 Cecr2E9Q2Z1 1453 aa31.43■■■□□ 2.62
Cpsf4-207ENSMUST00000162244 Rtl1Q7M732 1744 aa31.42■■■□□ 2.62
Cpsf4-207ENSMUST00000162244 Thoc2B1AZI6 1594 aaKnown RBP31.36■■■□□ 2.61
Cpsf4-207ENSMUST00000162244 Dnajc5bQ9CQ94 199 aa31.33■■■□□ 2.61
Cpsf4-207ENSMUST00000162244 Ercc6F8VPZ5 1481 aa31.25■■■□□ 2.59
Cpsf4-207ENSMUST00000162244 Iqgap2Q3UQ44 1575 aa31.23■■■□□ 2.59
Cpsf4-207ENSMUST00000162244 Ccdc136Q3TVA9 1136 aa31.01■■■□□ 2.55
Cpsf4-207ENSMUST00000162244 Brd4Q9ESU6 1400 aaKnown RBP30.97■■■□□ 2.55
Cpsf4-207ENSMUST00000162244 Wdr62Q3U3T8 1523 aa30.92■■■□□ 2.54
Cpsf4-207ENSMUST00000162244 Cc2d2aQ8CFW7 1633 aa30.9■■■□□ 2.54
Cpsf4-207ENSMUST00000162244 Frmpd1A2AKB4 1549 aa30.88■■■□□ 2.53
Cpsf4-207ENSMUST00000162244 CftrP26361 1476 aa30.85■■■□□ 2.53
Cpsf4-207ENSMUST00000162244 Fam135aQ6NS59 1506 aa30.77■■■□□ 2.52
Cpsf4-207ENSMUST00000162244 Cttnbp2B9EJA2 1648 aa30.77■■■□□ 2.52
Cpsf4-207ENSMUST00000162244 Synj1Q8CHC4 1574 aa30.75■■■□□ 2.51
Cpsf4-207ENSMUST00000162244 Phldb1Q6PDH0 1371 aaKnown RBP30.75■■■□□ 2.51
Cpsf4-207ENSMUST00000162244 Trim41Q5NCC3 630 aa30.69■■■□□ 2.5
Cpsf4-207ENSMUST00000162244 Baz1bQ9Z277 1479 aa30.61■■■□□ 2.49
Cpsf4-207ENSMUST00000162244 Esf1Q3V1V3 845 aaKnown RBP30.5■■■□□ 2.47
Cpsf4-207ENSMUST00000162244 Ubl4bQ9CQ84 188 aa30.48■■■□□ 2.47
Cpsf4-207ENSMUST00000162244 Unc13aQ4KUS2 1712 aa30.29■■■□□ 2.44
Cpsf4-207ENSMUST00000162244 Mrc2Q64449 1479 aa30.12■■■□□ 2.41
Cpsf4-207ENSMUST00000162244 Rsf1E9PWW9 1441 aaKnown RBP30.09■■■□□ 2.41
Cpsf4-207ENSMUST00000162244 Kif15Q6P9L6 1387 aa29.97■■■□□ 2.39
Cpsf4-207ENSMUST00000162244 Golga3P55937 1487 aa29.94■■■□□ 2.38
Cpsf4-207ENSMUST00000162244 Cux2P70298 1426 aa29.87■■■□□ 2.37
Cpsf4-207ENSMUST00000162244 Cngb1E1AZ71 1325 aa29.86■■■□□ 2.37
Cpsf4-207ENSMUST00000162244 Lamc3Q9R0B6 1581 aa29.85■■■□□ 2.37
Cpsf4-207ENSMUST00000162244 Top2bQ64511 1612 aa29.75■■■□□ 2.35
Cpsf4-207ENSMUST00000162244 Npm1Q61937 292 aaKnown RBP29.7■■■□□ 2.35
Cpsf4-207ENSMUST00000162244 TnnQ80Z71 1560 aa29.58■■■□□ 2.33
Cpsf4-207ENSMUST00000162244 Cep164Q5DU05 1446 aa29.57■■■□□ 2.32
Cpsf4-207ENSMUST00000162244 Fmn1Q05860 1466 aa29.54■■■□□ 2.32
Cpsf4-207ENSMUST00000162244 Ccdc18Q640L5 1455 aa29.54■■■□□ 2.32
Cpsf4-207ENSMUST00000162244 Il27Q8K3I6 234 aa29.42■■■□□ 2.3
Cpsf4-207ENSMUST00000162244 Kif21aQ9QXL2 1672 aa29.41■■■□□ 2.3
Cpsf4-207ENSMUST00000162244 Camsap1A2AHC3 1581 aa29.34■■■□□ 2.29
Cpsf4-207ENSMUST00000162244 Lrriq1Q0P5X1 1673 aa29.32■■■□□ 2.28
Cpsf4-207ENSMUST00000162244 LrpprcQ6PB66 1392 aaKnown RBP29.3■■■□□ 2.28
Cpsf4-207ENSMUST00000162244 Dhx29Q6PGC1 1365 aaKnown RBP29.26■■■□□ 2.27
Cpsf4-207ENSMUST00000162244 Ccdc88bQ4QRL3 1481 aa29.13■■■□□ 2.25
Cpsf4-207ENSMUST00000162244 PogzQ8BZH4 1409 aaKnown RBP29.12■■■□□ 2.25
Cpsf4-207ENSMUST00000162244 Crocc2F6XLV1 1638 aa29.07■■■□□ 2.24
Cpsf4-207ENSMUST00000162244 Plb1Q3TTY0 1478 aa29.06■■■□□ 2.24
Cpsf4-207ENSMUST00000162244 Urb2E9Q7L1 1524 aaKnown RBP29.04■■■□□ 2.24
Cpsf4-207ENSMUST00000162244 Grin2bQ01097 1482 aa29.02■■■□□ 2.24
Cpsf4-207ENSMUST00000162244 Chic1Q8CBW7 227 aa29.01■■■□□ 2.23
Cpsf4-207ENSMUST00000162244 Duox2A2AQ99 1517 aa28.98■■■□□ 2.23
Cpsf4-207ENSMUST00000162244 Top2aQ01320 1528 aaKnown RBP28.98■■■□□ 2.23
Cpsf4-207ENSMUST00000162244 Eif4g3Q80XI3 1579 aaKnown RBP28.95■■■□□ 2.23
Cpsf4-207ENSMUST00000162244 HrcG5E8J6 738 aa28.94■■■□□ 2.22
Cpsf4-207ENSMUST00000162244 Efcab5A0JP43 1406 aa28.91■■■□□ 2.22
Cpsf4-207ENSMUST00000162244 Ift140E9PY46 1464 aa28.9■■■□□ 2.22
Cpsf4-207ENSMUST00000162244 NrkQ9R0G8 1455 aa28.83■■■□□ 2.21
Cpsf4-207ENSMUST00000162244 Shroom4Q1W617 1475 aa28.68■■■□□ 2.18
Cpsf4-207ENSMUST00000162244 Disp1Q3TDN0 1521 aa28.67■■■□□ 2.18
Cpsf4-207ENSMUST00000162244 Samd9lQ69Z37 1561 aa28.65■■■□□ 2.18
Cpsf4-207ENSMUST00000162244 Rusc2Q80U22 1514 aa28.62■■■□□ 2.17
Cpsf4-207ENSMUST00000162244 PtprkP35822 1457 aa28.58■■■□□ 2.17
Cpsf4-207ENSMUST00000162244 Cc2d2bA0A286YDU8 1405 aa28.57■■■□□ 2.16
Cpsf4-207ENSMUST00000162244 Pbrm1Q8BSQ9 1634 aaKnown RBP28.56■■■□□ 2.16
Cpsf4-207ENSMUST00000162244 Nup160Q9Z0W3 1402 aaKnown RBP28.55■■■□□ 2.16
Cpsf4-207ENSMUST00000162244 Npm2Q80W85 207 aa28.53■■■□□ 2.16
Cpsf4-207ENSMUST00000162244 Zeb1Q64318 1117 aa28.51■■■□□ 2.16
Cpsf4-207ENSMUST00000162244 Rad54l2Q99NG0 1466 aa28.51■■■□□ 2.15
Cpsf4-207ENSMUST00000162244 Shroom2A2ALU4 1481 aa28.47■■■□□ 2.15
Cpsf4-207ENSMUST00000162244 Grin2aP35436 1464 aa28.45■■■□□ 2.14
Cpsf4-207ENSMUST00000162244 Gab3Q8BSM5 595 aa28.41■■■□□ 2.14
Cpsf4-207ENSMUST00000162244 Magi3Q9EQJ9 1476 aa28.41■■■□□ 2.14
Cpsf4-207ENSMUST00000162244 SynmQ70IV5 1561 aa28.4■■■□□ 2.14
Cpsf4-207ENSMUST00000162244 Pabpn1Q8CCS6 302 aaKnown RBP28.36■■■□□ 2.13
Cpsf4-207ENSMUST00000162244 AqrQ8CFQ3 1481 aaKnown RBP28.33■■■□□ 2.13
Cpsf4-207ENSMUST00000162244 Mroh2bQ7M6Y6 1581 aa28.31■■■□□ 2.12
Cpsf4-207ENSMUST00000162244 Pla2r1Q62028 1487 aa28.28■■■□□ 2.12
Cpsf4-207ENSMUST00000162244 Setd1bQ8CFT2 1985 aa28.27■■■□□ 2.12
Cpsf4-207ENSMUST00000162244 Rapgef2Q8CHG7 1496 aa28.26■■■□□ 2.11
Cpsf4-207ENSMUST00000162244 Gpatch8A2A6A1 1505 aa28.24■■■□□ 2.11
Cpsf4-207ENSMUST00000162244 Pelp1Q9DBD5 1123 aaKnown RBP28.21■■■□□ 2.11
Cpsf4-207ENSMUST00000162244 Fgd6Q69ZL1 1399 aa28.2■■■□□ 2.11
Cpsf4-207ENSMUST00000162244 Map3k1P53349 1493 aa28.17■■■□□ 2.1
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms