RNA–Protein interactions for RNA: ENSMUST00000058579.6

Ddx28-201, Transcript of Probable ATP-dependent RNA helicase DDX28, mousemouse

APPRIS P1 BASIC

Gene Ddx28, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28-201ENSMUST00000058579 PlecQ9QXS1 4691 aaKnown RBP10.4□□□□□ -0.75
Ddx28-201ENSMUST00000058579 Igkv3-3A0A140T8Q0 119 aa10.39□□□□□ -0.75
Ddx28-201ENSMUST00000058579 Cypt14J3QPF7 87 aa10.36□□□□□ -0.75
Ddx28-201ENSMUST00000058579 Adm2Q7TNK8 150 aa10.36□□□□□ -0.75
Ddx28-201ENSMUST00000058579 Defb38Q7TNV7 63 aa10.36□□□□□ -0.75
Ddx28-201ENSMUST00000058579 Gm9918Q8BUR5 174 aa10.36□□□□□ -0.75
Ddx28-201ENSMUST00000058579 Znf706Q9D115 76 aaKnown RBP10.36□□□□□ -0.75
Ddx28-201ENSMUST00000058579 Anapc11Q9CPX9 84 aa10.35□□□□□ -0.75
Ddx28-201ENSMUST00000058579 Gm28374F6SG70 93 aa10.35□□□□□ -0.75
Ddx28-201ENSMUST00000058579 NbdyA0A0N4SUI7 68 aa10.34□□□□□ -0.75
Ddx28-201ENSMUST00000058579 Gm16253D3Z167 63 aa10.32□□□□□ -0.76
Ddx28-201ENSMUST00000058579 Defb39Q70KL3 74 aa10.26□□□□□ -0.77
Ddx28-201ENSMUST00000058579 Gm20661K7N787 53 aa10.25□□□□□ -0.77
Ddx28-201ENSMUST00000058579 1600014C23RikQ9DAX4 101 aa10.25□□□□□ -0.77
Ddx28-201ENSMUST00000058579 Ly6g6cQ9Z1Q4 126 aa10.24□□□□□ -0.77
Ddx28-201ENSMUST00000058579 2310050C09RikG5E8Z3 280 aa10.23□□□□□ -0.77
Ddx28-201ENSMUST00000058579 Dnah7aE9Q0T8 4024 aa10.23□□□□□ -0.77
Ddx28-201ENSMUST00000058579 Ccdc179J3QM76 67 aa10.22□□□□□ -0.77
Ddx28-201ENSMUST00000058579 Tnp2P11378 117 aa10.21□□□□□ -0.77
Ddx28-201ENSMUST00000058579 Gpr15lA0A0B4J1N3 78 aa10.19□□□□□ -0.78
Ddx28-201ENSMUST00000058579 Dnah7cA0A087WR13 4024 aa10.19□□□□□ -0.78
Ddx28-201ENSMUST00000058579 Krtap14O08640 167 aa10.17□□□□□ -0.78
Ddx28-201ENSMUST00000058579 Dnah5Q8VHE6 4621 aa10.17□□□□□ -0.78
Ddx28-201ENSMUST00000058579 SptssbQ925E8 76 aa10.15□□□□□ -0.78
Ddx28-201ENSMUST00000058579 Defb13Q8R2I4 64 aa10.14□□□□□ -0.79
Ddx28-201ENSMUST00000058579 Gm21798J3QNU5 87 aa10.14□□□□□ -0.79
Ddx28-201ENSMUST00000058579 Gm10643Q3URG9 111 aa10.14□□□□□ -0.79
Ddx28-201ENSMUST00000058579 Ndufb1P0DN34 57 aa10.12□□□□□ -0.79
Ddx28-201ENSMUST00000058579 Cypt15B1AXS0 87 aa10.09□□□□□ -0.79
Ddx28-201ENSMUST00000058579 Hectd4E9Q2E4 4418 aa10.09□□□□□ -0.79
Ddx28-201ENSMUST00000058579 Krtap10-4Q08EG8 221 aa10.08□□□□□ -0.8
Ddx28-201ENSMUST00000058579 Spaca4Q80ZQ0 127 aa10.04□□□□□ -0.8
Ddx28-201ENSMUST00000058579 Limd2Q8BGB5 128 aa9.99□□□□□ -0.81
Ddx28-201ENSMUST00000058579 Dnah2P0C6F1 4456 aa9.98□□□□□ -0.81
Ddx28-201ENSMUST00000058579 Uqcr11Q9CPX8 56 aa9.98□□□□□ -0.81
Ddx28-201ENSMUST00000058579 Gm3646F6S692 53 aa9.97□□□□□ -0.81
Ddx28-201ENSMUST00000058579 Vps13dB1ART2 4390 aa9.96□□□□□ -0.81
Ddx28-201ENSMUST00000058579 Krtap13O88375 197 aa9.95□□□□□ -0.82
Ddx28-201ENSMUST00000058579 Wfdc3Q14AE4 130 aa9.95□□□□□ -0.82
Ddx28-201ENSMUST00000058579 Pkd1O08852 4293 aa9.92□□□□□ -0.82
Ddx28-201ENSMUST00000058579 Stard9Q80TF6 4561 aa9.91□□□□□ -0.82
Ddx28-201ENSMUST00000058579 Gm10999F6Q4M4 69 aa9.91□□□□□ -0.82
Ddx28-201ENSMUST00000058579 OxtP35454 125 aa9.9□□□□□ -0.82
Ddx28-201ENSMUST00000058579 9230102O04RikA2ASX7 82 aa9.88□□□□□ -0.83
Ddx28-201ENSMUST00000058579 Gm26620Q9CY65 116 aa9.88□□□□□ -0.83
Ddx28-201ENSMUST00000058579 Sec61gP60060 68 aa9.87□□□□□ -0.83
Ddx28-201ENSMUST00000058579 ApobE9Q414 4505 aa9.86□□□□□ -0.83
Ddx28-201ENSMUST00000058579 1700042G07RikB1AUF7 90 aa9.85□□□□□ -0.83
Ddx28-201ENSMUST00000058579 Lrp1bQ9JI18 4599 aa9.83□□□□□ -0.84
Ddx28-201ENSMUST00000058579 Q8BGJ3 129 aa9.83□□□□□ -0.84
Ddx28-201ENSMUST00000058579 2310034C09RikQ9D746 214 aa9.82□□□□□ -0.84
Ddx28-201ENSMUST00000058579 Krtap10-10A0A1W2P7T6 217 aa9.8□□□□□ -0.84
Ddx28-201ENSMUST00000058579 Gm2696A0A1W2P709 240 aa9.79□□□□□ -0.84
Ddx28-201ENSMUST00000058579 2310079G19RikQ9D6L6 185 aa9.75□□□□□ -0.85
Ddx28-201ENSMUST00000058579 Defb1P56386 69 aa9.72□□□□□ -0.85
Ddx28-201ENSMUST00000058579 Ndufs5Q99LY9 106 aa9.72□□□□□ -0.85
Ddx28-201ENSMUST00000058579 Krtap3-2Q9D638 99 aa9.71□□□□□ -0.86
Ddx28-201ENSMUST00000058579 Krtap3-3Q9D7P0 99 aa9.71□□□□□ -0.86
Ddx28-201ENSMUST00000058579 Pkhd1E9PZ36 4059 aa9.71□□□□□ -0.86
Ddx28-201ENSMUST00000058579 Ryr3A2AGL3 4863 aa9.66□□□□□ -0.86
Ddx28-201ENSMUST00000058579 Fat1A0A1L1SQU7 4645 aa9.65□□□□□ -0.86
Ddx28-201ENSMUST00000058579 A930033H14RikG5E8X6 103 aa9.63□□□□□ -0.87
Ddx28-201ENSMUST00000058579 4930507D05RikQ8C9C9 103 aa9.62□□□□□ -0.87
Ddx28-201ENSMUST00000058579 Dync1h1Q9JHU4 4644 aaKnown RBP9.6□□□□□ -0.87
Ddx28-201ENSMUST00000058579 D6Ertd527eA0A0N4SWI3 464 aa9.54□□□□□ -0.88
Ddx28-201ENSMUST00000058579 Gm4491E0CX42 125 aa9.54□□□□□ -0.88
Ddx28-201ENSMUST00000058579 Fat2Q5F226 4351 aa9.53□□□□□ -0.88
Ddx28-201ENSMUST00000058579 SacsQ9JLC8 4582 aa9.51□□□□□ -0.89
Ddx28-201ENSMUST00000058579 Rps29P62274 56 aa9.48□□□□□ -0.89
Ddx28-201ENSMUST00000058579 Gm11939A2A592 99 aa9.44□□□□□ -0.9
Ddx28-201ENSMUST00000058579 RetnlbQ99P86 105 aa9.44□□□□□ -0.9
Ddx28-201ENSMUST00000058579 Gm9821Q8K076 103 aa9.43□□□□□ -0.9
Ddx28-201ENSMUST00000058579 Ryr2E9Q401 4966 aaKnown RBP9.41□□□□□ -0.9
Ddx28-201ENSMUST00000058579 Pla2g10Q9QXX3 151 aa9.34□□□□□ -0.91
Ddx28-201ENSMUST00000058579 Vps13bQ80TY5 3993 aa9.28□□□□□ -0.92
Ddx28-201ENSMUST00000058579 Cox6b2Q80ZN9 88 aa9.26□□□□□ -0.93
Ddx28-201ENSMUST00000058579 Kmt2cQ8BRH4 4903 aa9.26□□□□□ -0.93
Ddx28-201ENSMUST00000058579 Lrp1Q91ZX7 4545 aaKnown RBP9.22□□□□□ -0.93
Ddx28-201ENSMUST00000058579 Pkhd1l1Q80ZA4 4249 aa9.22□□□□□ -0.93
Ddx28-201ENSMUST00000058579 Gm20537G3UYK7 97 aa9.2□□□□□ -0.94
Ddx28-201ENSMUST00000058579 Ryr1E9PZQ0 5035 aa9.16□□□□□ -0.94
Ddx28-201ENSMUST00000058579 Gm5767A0A0J9YTU8 78 aa9.15□□□□□ -0.94
Ddx28-201ENSMUST00000058579 Gm3880A0A1B0GSB3 72 aa9.11□□□□□ -0.95
Ddx28-201ENSMUST00000058579 Krtap19-5O08632 62 aa9.09□□□□□ -0.95
Ddx28-201ENSMUST00000058579 Abca13Q5SSE9 5034 aa9.04□□□□□ -0.96
Ddx28-201ENSMUST00000058579 Fat3Q8BNA6 4555 aa9.03□□□□□ -0.96
Ddx28-201ENSMUST00000058579 Dnah8Q91XQ0 4731 aa9.01□□□□□ -0.97
Ddx28-201ENSMUST00000058579 Gm9955Q8CEJ8 102 aa8.97□□□□□ -0.97
Ddx28-201ENSMUST00000058579 Rnase13Q5GAM7 153 aa8.96□□□□□ -0.98
Ddx28-201ENSMUST00000058579 Gm10382Q3V0T5 144 aa8.94□□□□□ -0.98
Ddx28-201ENSMUST00000058579 Gm9736A0A1W2P7N1 277 aa8.93□□□□□ -0.98
Ddx28-201ENSMUST00000058579 Gm17606F6ZL36 78 aa8.93□□□□□ -0.98
Ddx28-201ENSMUST00000058579 Gm12216A0A1W2P827 62 aa8.92□□□□□ -0.98
Ddx28-201ENSMUST00000058579 Mycbp2Q7TPH6 4711 aa8.92□□□□□ -0.98
Ddx28-201ENSMUST00000058579 Krtap15-1Q9QZU5 150 aa8.9□□□□□ -0.98
Ddx28-201ENSMUST00000058579 Gm5965D3Z724 196 aa8.88□□□□□ -0.99
Ddx28-201ENSMUST00000058579 Rpl37Q9D823 97 aa8.88□□□□□ -0.99
Ddx28-201ENSMUST00000058579 Gm21887J3QQ04 176 aa8.87□□□□□ -0.99
Ddx28-201ENSMUST00000058579 Herc2Q4U2R1 4836 aa8.79□□□□□ -1
Ddx28-201ENSMUST00000058579 Kiaa1109A2AAE1 5005 aa8.76□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 49.7 ms