RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Xcl1P47993 114 aa10.59□□□□□ -0.71
Vti1b-201ENSMUST00000055262 Gm7735D3YX18 52 aa10.55□□□□□ -0.72
Vti1b-201ENSMUST00000055262 Gm2310J3QNJ2 377 aa10.55□□□□□ -0.72
Vti1b-201ENSMUST00000055262 Trav14d-3-dv8A0A075B619 120 aa10.54□□□□□ -0.72
Vti1b-201ENSMUST00000055262 Tmem213Q08EA8 116 aa10.51□□□□□ -0.73
Vti1b-201ENSMUST00000055262 Gm44790A0A0N4SV91 103 aa10.5□□□□□ -0.73
Vti1b-201ENSMUST00000055262 Ormdl1Q921I0 153 aa10.5□□□□□ -0.73
Vti1b-201ENSMUST00000055262 Gm20604F8WIA3 75 aa10.49□□□□□ -0.73
Vti1b-201ENSMUST00000055262 Igkv8-21A0A140T8P7 120 aa10.49□□□□□ -0.73
Vti1b-201ENSMUST00000055262 Gm9789Q8BIG3 52 aa10.49□□□□□ -0.73
Vti1b-201ENSMUST00000055262 Gm37013Q8K491 104 aa10.49□□□□□ -0.73
Vti1b-201ENSMUST00000055262 Gm5965D3Z724 196 aa10.47□□□□□ -0.73
Vti1b-201ENSMUST00000055262 UqcrqQ9CQ69 82 aa10.47□□□□□ -0.73
Vti1b-201ENSMUST00000055262 Mrpl34Q99N91 92 aa10.46□□□□□ -0.74
Vti1b-201ENSMUST00000055262 Ush2AQ2QI47 5193 aa10.43□□□□□ -0.74
Vti1b-201ENSMUST00000055262 C130032M10RikQ8C888 123 aa10.42□□□□□ -0.74
Vti1b-201ENSMUST00000055262 Gm19402J3QJV4 266 aa10.41□□□□□ -0.74
Vti1b-201ENSMUST00000055262 Cystm1Q8K353 104 aa10.4□□□□□ -0.74
Vti1b-201ENSMUST00000055262 Pxt1Q8K459 51 aa10.33□□□□□ -0.76
Vti1b-201ENSMUST00000055262 Cypt15B1AXS0 87 aa10.32□□□□□ -0.76
Vti1b-201ENSMUST00000055262 Ubl5Q9EPV8 73 aa10.32□□□□□ -0.76
Vti1b-201ENSMUST00000055262 Gm5767A0A0J9YTU8 78 aa10.3□□□□□ -0.76
Vti1b-201ENSMUST00000055262 Gtf2h5Q8K2X8 71 aa10.3□□□□□ -0.76
Vti1b-201ENSMUST00000055262 MplkipQ9D011 178 aa10.28□□□□□ -0.76
Vti1b-201ENSMUST00000055262 Reg3aO09037 175 aa10.27□□□□□ -0.77
Vti1b-201ENSMUST00000055262 Lyrm7Q9DA03 104 aa10.27□□□□□ -0.77
Vti1b-201ENSMUST00000055262 Defa21Q8C1P2 93 aa10.25□□□□□ -0.77
Vti1b-201ENSMUST00000055262 Hmcn2A2AJ76 5100 aa10.24□□□□□ -0.77
Vti1b-201ENSMUST00000055262 4932415D10RikA0A1W2P6U8 4986 aa10.23□□□□□ -0.77
Vti1b-201ENSMUST00000055262 Cdip1Q9DB75 208 aa10.22□□□□□ -0.77
Vti1b-201ENSMUST00000055262 A030005L19RikA0A1Y7VIU2 113 aa10.21□□□□□ -0.78
Vti1b-201ENSMUST00000055262 Ubr4A2AN08 5180 aa10.21□□□□□ -0.78
Vti1b-201ENSMUST00000055262 Gm26620Q9CY65 116 aa10.2□□□□□ -0.78
Vti1b-201ENSMUST00000055262 Igkv8-19A0A0G2JFN8 121 aa10.17□□□□□ -0.78
Vti1b-201ENSMUST00000055262 Igkv3-3A0A140T8Q0 119 aa10.17□□□□□ -0.78
Vti1b-201ENSMUST00000055262 Bud31Q6PGH1 103 aa10.16□□□□□ -0.78
Vti1b-201ENSMUST00000055262 Trav3-1Q5R1I8 114 aa10.15□□□□□ -0.78
Vti1b-201ENSMUST00000055262 Tmem254aP0DN89 123 aa10.14□□□□□ -0.79
Vti1b-201ENSMUST00000055262 Tmem254bP0DN90 123 aa10.14□□□□□ -0.79
Vti1b-201ENSMUST00000055262 Tmem254cP0DN91 123 aa10.14□□□□□ -0.79
Vti1b-201ENSMUST00000055262 Gm9821Q8K076 103 aa10.12□□□□□ -0.79
Vti1b-201ENSMUST00000055262 A0A1Y7VJ07 166 aa10.11□□□□□ -0.79
Vti1b-201ENSMUST00000055262 BikO70337 150 aa10.09□□□□□ -0.79
Vti1b-201ENSMUST00000055262 Krtap15-1Q9QZU5 150 aa10.06□□□□□ -0.8
Vti1b-201ENSMUST00000055262 Gm7544A0A1Y7VJ58 118 aa10.04□□□□□ -0.8
Vti1b-201ENSMUST00000055262 Fam240bJ3QMB3 78 aa10.04□□□□□ -0.8
Vti1b-201ENSMUST00000055262 Defb13Q8R2I4 64 aa10.03□□□□□ -0.8
Vti1b-201ENSMUST00000055262 Prr15lQ8JZM2 100 aa10.01□□□□□ -0.81
Vti1b-201ENSMUST00000055262 2310057N15RikQ9D6T8 200 aa9.99□□□□□ -0.81
Vti1b-201ENSMUST00000055262 Gm45213A0A0U1RNZ6 101 aa9.98□□□□□ -0.81
Vti1b-201ENSMUST00000055262 Scgb1b2O35176 93 aa9.98□□□□□ -0.81
Vti1b-201ENSMUST00000055262 Gm10267M0QWD8 85 aa9.97□□□□□ -0.81
Vti1b-201ENSMUST00000055262 Hist1h4aP62806 103 aaKnown RBP9.97□□□□□ -0.81
Vti1b-201ENSMUST00000055262 Sec61bQ9CQS8 96 aaKnown RBP9.94□□□□□ -0.82
Vti1b-201ENSMUST00000055262 Rpl37Q9D823 97 aa9.94□□□□□ -0.82
Vti1b-201ENSMUST00000055262 A030014E15RikA0A1Y7VJV2 120 aa9.91□□□□□ -0.82
Vti1b-201ENSMUST00000055262 A0A286YE49 62 aa9.91□□□□□ -0.82
Vti1b-201ENSMUST00000055262 Krtap1-3A2A588 173 aa9.88□□□□□ -0.83
Vti1b-201ENSMUST00000055262 Samd13D3YUG0 102 aa9.87□□□□□ -0.83
Vti1b-201ENSMUST00000055262 Crct1Q6PAI5 102 aa9.84□□□□□ -0.83
Vti1b-201ENSMUST00000055262 BatfO35284 125 aa9.82□□□□□ -0.84
Vti1b-201ENSMUST00000055262 Spink8Q09TK9 105 aa9.82□□□□□ -0.84
Vti1b-201ENSMUST00000055262 Naa38Q9D2U5 125 aa9.8□□□□□ -0.84
Vti1b-201ENSMUST00000055262 7530416G11RikJ3QJX6 159 aa9.79□□□□□ -0.84
Vti1b-201ENSMUST00000055262 2310034C09RikQ9D746 214 aa9.79□□□□□ -0.84
Vti1b-201ENSMUST00000055262 Ndufc1Q9CQY9 76 aa9.77□□□□□ -0.85
Vti1b-201ENSMUST00000055262 Fam229bQ8CF36 80 aa9.76□□□□□ -0.85
Vti1b-201ENSMUST00000055262 Apoc4Q61268 124 aa9.72□□□□□ -0.85
Vti1b-201ENSMUST00000055262 Atp5eP56382 52 aa9.71□□□□□ -0.86
Vti1b-201ENSMUST00000055262 Rnase13Q5GAM7 153 aa9.71□□□□□ -0.86
Vti1b-201ENSMUST00000055262 1700074P13RikQ9D9G7 251 aa9.69□□□□□ -0.86
Vti1b-201ENSMUST00000055262 ZanO88799 5376 aa9.67□□□□□ -0.86
Vti1b-201ENSMUST00000055262 LorP18165 486 aa9.64□□□□□ -0.87
Vti1b-201ENSMUST00000055262 Gm4491E0CX42 125 aa9.61□□□□□ -0.87
Vti1b-201ENSMUST00000055262 Krtap16-3Q8C1I6 86 aa9.54□□□□□ -0.88
Vti1b-201ENSMUST00000055262 Gm28539A0A087WSL9 92 aa9.53□□□□□ -0.88
Vti1b-201ENSMUST00000055262 Gm17416Q30KP4 66 aa9.53□□□□□ -0.88
Vti1b-201ENSMUST00000055262 Fat4Q2PZL6 4981 aa9.52□□□□□ -0.88
Vti1b-201ENSMUST00000055262 Krtap19-1Q925H2 87 aa9.52□□□□□ -0.89
Vti1b-201ENSMUST00000055262 Krtap19-3Q925H6 87 aa9.52□□□□□ -0.89
Vti1b-201ENSMUST00000055262 Gm10318A0A1W2P728 225 aa9.51□□□□□ -0.89
Vti1b-201ENSMUST00000055262 4930518I15RikQ3V2W7 57 aa9.51□□□□□ -0.89
Vti1b-201ENSMUST00000055262 Gm38119A0A0A6YX29 146 aa9.48□□□□□ -0.89
Vti1b-201ENSMUST00000055262 Q8BGJ3 129 aa9.47□□□□□ -0.89
Vti1b-201ENSMUST00000055262 Gm10999F6Q4M4 69 aa9.46□□□□□ -0.9
Vti1b-201ENSMUST00000055262 Rnf213E9Q555 5152 aaKnown RBP9.45□□□□□ -0.9
Vti1b-201ENSMUST00000055262 9230102O04RikA2ASX7 82 aa9.44□□□□□ -0.9
Vti1b-201ENSMUST00000055262 Anapc13Q8R034 74 aa9.44□□□□□ -0.9
Vti1b-201ENSMUST00000055262 Atox1O08997 68 aaKnown RBP9.43□□□□□ -0.9
Vti1b-201ENSMUST00000055262 Serp2Q6TAW2 65 aa9.43□□□□□ -0.9
Vti1b-201ENSMUST00000055262 1700042G07RikB1AUF7 90 aa9.41□□□□□ -0.9
Vti1b-201ENSMUST00000055262 Fam229aB2KGE5 128 aa9.4□□□□□ -0.91
Vti1b-201ENSMUST00000055262 Defb38Q7TNV7 63 aa9.38□□□□□ -0.91
Vti1b-201ENSMUST00000055262 Chtf8P0CG14 533 aa9.37□□□□□ -0.91
Vti1b-201ENSMUST00000055262 Coa6Q8BGD8 79 aa9.34□□□□□ -0.91
Vti1b-201ENSMUST00000055262 B230307C23RikQ8BLB2 64 aa9.33□□□□□ -0.92
Vti1b-201ENSMUST00000055262 4930507D05RikQ8C9C9 103 aa9.32□□□□□ -0.92
Vti1b-201ENSMUST00000055262 Spint4Q9D263 159 aa9.32□□□□□ -0.92
Vti1b-201ENSMUST00000055262 Gm10061D3Z714 54 aa9.3□□□□□ -0.92
Vti1b-201ENSMUST00000055262 Gm10160F6Y577 67 aa9.3□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 79.2 ms