RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 Gm16253D3Z167 63 aa11.85□□□□□ -0.51
Ccdc34-201ENSMUST00000028580 Adm2Q7TNK8 150 aa11.85□□□□□ -0.51
Ccdc34-201ENSMUST00000028580 Igkv3-3A0A140T8Q0 119 aa11.84□□□□□ -0.51
Ccdc34-201ENSMUST00000028580 Tnp2P11378 117 aa11.84□□□□□ -0.51
Ccdc34-201ENSMUST00000028580 Gpr15lA0A0B4J1N3 78 aa11.83□□□□□ -0.52
Ccdc34-201ENSMUST00000028580 Defb39Q70KL3 74 aa11.83□□□□□ -0.52
Ccdc34-201ENSMUST00000028580 Gm10267M0QWD8 85 aa11.82□□□□□ -0.52
Ccdc34-201ENSMUST00000028580 Ccdc179J3QM76 67 aa11.79□□□□□ -0.52
Ccdc34-201ENSMUST00000028580 Phxr4P15974 95 aa11.78□□□□□ -0.52
Ccdc34-201ENSMUST00000028580 Ly6g6cQ9Z1Q4 126 aa11.77□□□□□ -0.53
Ccdc34-201ENSMUST00000028580 2310050C09RikG5E8Z3 280 aa11.75□□□□□ -0.53
Ccdc34-201ENSMUST00000028580 Gm10160F6Y577 67 aa11.75□□□□□ -0.53
Ccdc34-201ENSMUST00000028580 Anapc11Q9CPX9 84 aa11.74□□□□□ -0.53
Ccdc34-201ENSMUST00000028580 1600014C23RikQ9DAX4 101 aa11.73□□□□□ -0.53
Ccdc34-201ENSMUST00000028580 Krtap14O08640 167 aa11.72□□□□□ -0.53
Ccdc34-201ENSMUST00000028580 Bean1Q9EQG5 255 aa11.68□□□□□ -0.54
Ccdc34-201ENSMUST00000028580 Sox16Q62247 57 aa11.66□□□□□ -0.54
Ccdc34-201ENSMUST00000028580 4933415A04RikQ9D443 101 aa11.61□□□□□ -0.55
Ccdc34-201ENSMUST00000028580 Dnah7cA0A087WR13 4024 aa11.59□□□□□ -0.55
Ccdc34-201ENSMUST00000028580 Gm10643Q3URG9 111 aa11.58□□□□□ -0.56
Ccdc34-201ENSMUST00000028580 Dnah5Q8VHE6 4621 aa11.54□□□□□ -0.56
Ccdc34-201ENSMUST00000028580 Defb38Q7TNV7 63 aa11.53□□□□□ -0.56
Ccdc34-201ENSMUST00000028580 Cypt15B1AXS0 87 aa11.52□□□□□ -0.57
Ccdc34-201ENSMUST00000028580 Dnah7aE9Q0T8 4024 aa11.52□□□□□ -0.57
Ccdc34-201ENSMUST00000028580 Hectd4E9Q2E4 4418 aa11.52□□□□□ -0.57
Ccdc34-201ENSMUST00000028580 OxtP35454 125 aa11.51□□□□□ -0.57
Ccdc34-201ENSMUST00000028580 Gm20661K7N787 53 aa11.5□□□□□ -0.57
Ccdc34-201ENSMUST00000028580 Defb13Q8R2I4 64 aa11.47□□□□□ -0.57
Ccdc34-201ENSMUST00000028580 Krtap10-4Q08EG8 221 aa11.46□□□□□ -0.57
Ccdc34-201ENSMUST00000028580 Vps13dB1ART2 4390 aa11.44□□□□□ -0.58
Ccdc34-201ENSMUST00000028580 Dnah2P0C6F1 4456 aa11.44□□□□□ -0.58
Ccdc34-201ENSMUST00000028580 Gm21798J3QNU5 87 aa11.43□□□□□ -0.58
Ccdc34-201ENSMUST00000028580 Spaca4Q80ZQ0 127 aa11.42□□□□□ -0.58
Ccdc34-201ENSMUST00000028580 Ndufb1P0DN34 57 aa11.38□□□□□ -0.59
Ccdc34-201ENSMUST00000028580 ApobE9Q414 4505 aa11.37□□□□□ -0.59
Ccdc34-201ENSMUST00000028580 Pkd1O08852 4293 aa11.37□□□□□ -0.59
Ccdc34-201ENSMUST00000028580 Krtap13O88375 197 aa11.35□□□□□ -0.59
Ccdc34-201ENSMUST00000028580 Stard9Q80TF6 4561 aa11.32□□□□□ -0.6
Ccdc34-201ENSMUST00000028580 Limd2Q8BGB5 128 aa11.28□□□□□ -0.6
Ccdc34-201ENSMUST00000028580 Lrp1bQ9JI18 4599 aa11.27□□□□□ -0.6
Ccdc34-201ENSMUST00000028580 SptssbQ925E8 76 aa11.27□□□□□ -0.61
Ccdc34-201ENSMUST00000028580 Uqcr11Q9CPX8 56 aa11.27□□□□□ -0.61
Ccdc34-201ENSMUST00000028580 Wfdc3Q14AE4 130 aa11.19□□□□□ -0.62
Ccdc34-201ENSMUST00000028580 Gm10999F6Q4M4 69 aa11.18□□□□□ -0.62
Ccdc34-201ENSMUST00000028580 Gm2696A0A1W2P709 240 aa11.15□□□□□ -0.63
Ccdc34-201ENSMUST00000028580 Krtap3-2Q9D638 99 aa11.14□□□□□ -0.63
Ccdc34-201ENSMUST00000028580 Krtap3-3Q9D7P0 99 aa11.14□□□□□ -0.63
Ccdc34-201ENSMUST00000028580 Krtap10-10A0A1W2P7T6 217 aa11.13□□□□□ -0.63
Ccdc34-201ENSMUST00000028580 2310079G19RikQ9D6L6 185 aa11.12□□□□□ -0.63
Ccdc34-201ENSMUST00000028580 Pkhd1E9PZ36 4059 aa11.12□□□□□ -0.63
Ccdc34-201ENSMUST00000028580 2310034C09RikQ9D746 214 aa11.12□□□□□ -0.63
Ccdc34-201ENSMUST00000028580 Q8BGJ3 129 aa11.11□□□□□ -0.63
Ccdc34-201ENSMUST00000028580 Gm3646F6S692 53 aa11.1□□□□□ -0.63
Ccdc34-201ENSMUST00000028580 A930033H14RikG5E8X6 103 aa11.07□□□□□ -0.64
Ccdc34-201ENSMUST00000028580 Rps29P62274 56 aa11.06□□□□□ -0.64
Ccdc34-201ENSMUST00000028580 Dync1h1Q9JHU4 4644 aaKnown RBP11.01□□□□□ -0.65
Ccdc34-201ENSMUST00000028580 Gm26620Q9CY65 116 aa11□□□□□ -0.65
Ccdc34-201ENSMUST00000028580 SacsQ9JLC8 4582 aa10.99□□□□□ -0.65
Ccdc34-201ENSMUST00000028580 Fat2Q5F226 4351 aa10.96□□□□□ -0.66
Ccdc34-201ENSMUST00000028580 Fat1A0A1L1SQU7 4645 aa10.96□□□□□ -0.66
Ccdc34-201ENSMUST00000028580 4930507D05RikQ8C9C9 103 aa10.94□□□□□ -0.66
Ccdc34-201ENSMUST00000028580 1700042G07RikB1AUF7 90 aa10.91□□□□□ -0.66
Ccdc34-201ENSMUST00000028580 Gm11939A2A592 99 aa10.89□□□□□ -0.67
Ccdc34-201ENSMUST00000028580 D6Ertd527eA0A0N4SWI3 464 aa10.86□□□□□ -0.67
Ccdc34-201ENSMUST00000028580 Gm4491E0CX42 125 aa10.86□□□□□ -0.67
Ccdc34-201ENSMUST00000028580 Defb1P56386 69 aa10.86□□□□□ -0.67
Ccdc34-201ENSMUST00000028580 Ryr3A2AGL3 4863 aa10.8□□□□□ -0.68
Ccdc34-201ENSMUST00000028580 RetnlbQ99P86 105 aa10.8□□□□□ -0.68
Ccdc34-201ENSMUST00000028580 9230102O04RikA2ASX7 82 aa10.74□□□□□ -0.69
Ccdc34-201ENSMUST00000028580 Ndufs5Q99LY9 106 aa10.74□□□□□ -0.69
Ccdc34-201ENSMUST00000028580 Sec61gP60060 68 aa10.73□□□□□ -0.69
Ccdc34-201ENSMUST00000028580 Pkhd1l1Q80ZA4 4249 aa10.71□□□□□ -0.69
Ccdc34-201ENSMUST00000028580 Ryr2E9Q401 4966 aaKnown RBP10.7□□□□□ -0.7
Ccdc34-201ENSMUST00000028580 Gm5767A0A0J9YTU8 78 aa10.56□□□□□ -0.72
Ccdc34-201ENSMUST00000028580 Vps13bQ80TY5 3993 aa10.56□□□□□ -0.72
Ccdc34-201ENSMUST00000028580 Cox6b2Q80ZN9 88 aa10.56□□□□□ -0.72
Ccdc34-201ENSMUST00000028580 Pla2g10Q9QXX3 151 aa10.52□□□□□ -0.73
Ccdc34-201ENSMUST00000028580 Krtap19-5O08632 62 aa10.48□□□□□ -0.73
Ccdc34-201ENSMUST00000028580 Lrp1Q91ZX7 4545 aaKnown RBP10.41□□□□□ -0.74
Ccdc34-201ENSMUST00000028580 Ryr1E9PZQ0 5035 aa10.41□□□□□ -0.74
Ccdc34-201ENSMUST00000028580 Kmt2cQ8BRH4 4903 aa10.41□□□□□ -0.74
Ccdc34-201ENSMUST00000028580 Gm9821Q8K076 103 aa10.4□□□□□ -0.75
Ccdc34-201ENSMUST00000028580 Dnah8Q91XQ0 4731 aa10.37□□□□□ -0.75
Ccdc34-201ENSMUST00000028580 Gm20537G3UYK7 97 aa10.35□□□□□ -0.75
Ccdc34-201ENSMUST00000028580 Fat3Q8BNA6 4555 aa10.32□□□□□ -0.76
Ccdc34-201ENSMUST00000028580 Rpl37Q9D823 97 aa10.27□□□□□ -0.77
Ccdc34-201ENSMUST00000028580 Rnase13Q5GAM7 153 aa10.26□□□□□ -0.77
Ccdc34-201ENSMUST00000028580 Gm9736A0A1W2P7N1 277 aa10.24□□□□□ -0.77
Ccdc34-201ENSMUST00000028580 Gm5965D3Z724 196 aa10.19□□□□□ -0.78
Ccdc34-201ENSMUST00000028580 Gm9955Q8CEJ8 102 aa10.18□□□□□ -0.78
Ccdc34-201ENSMUST00000028580 Krtap15-1Q9QZU5 150 aa10.17□□□□□ -0.78
Ccdc34-201ENSMUST00000028580 Gm17416Q30KP4 66 aa10.15□□□□□ -0.78
Ccdc34-201ENSMUST00000028580 Gm3880A0A1B0GSB3 72 aa10.13□□□□□ -0.79
Ccdc34-201ENSMUST00000028580 Gm17606F6ZL36 78 aa10.13□□□□□ -0.79
Ccdc34-201ENSMUST00000028580 Gm10382Q3V0T5 144 aa10.12□□□□□ -0.79
Ccdc34-201ENSMUST00000028580 Abca13Q5SSE9 5034 aa10.06□□□□□ -0.8
Ccdc34-201ENSMUST00000028580 Mycbp2Q7TPH6 4711 aa10.05□□□□□ -0.8
Ccdc34-201ENSMUST00000028580 Dnhd1D3Z2X2 4750 aa10.01□□□□□ -0.81
Ccdc34-201ENSMUST00000028580 Krtap3-1A2A591 98 aa10□□□□□ -0.81
Ccdc34-201ENSMUST00000028580 2210017I01RikA0A0A6YVV1 95 aa9.91□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 2569.7 ms