RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 NischQ80TM9 1593 aa38.39■■■■□ 3.74
Ccdc34-201ENSMUST00000028580 Gm35339A0A140LHH9 1649 aa38.13■■■■□ 3.69
Ccdc34-201ENSMUST00000028580 Abcc9P70170 1546 aa37.39■■■■□ 3.58
Ccdc34-201ENSMUST00000028580 Abcc8B2RUS7 1588 aa36.52■■■■□ 3.44
Ccdc34-201ENSMUST00000028580 Rtl1Q7M732 1744 aa35.32■■■■□ 3.25
Ccdc34-201ENSMUST00000028580 Rhox8Q6VSS7 320 aa35.3■■■■□ 3.24
Ccdc34-201ENSMUST00000028580 Ccdc180J3QNE4 1664 aa34.63■■■■□ 3.14
Ccdc34-201ENSMUST00000028580 ScribQ80U72 1612 aa34.36■■■■□ 3.09
Ccdc34-201ENSMUST00000028580 Dcaf1Q80TR8 1506 aa34.25■■■■□ 3.07
Ccdc34-201ENSMUST00000028580 Zcchc6Q5BLK4 1491 aaKnown RBP34.04■■■■□ 3.04
Ccdc34-201ENSMUST00000028580 Rb1cc1Q9ESK9 1588 aa33.63■■■□□ 2.97
Ccdc34-201ENSMUST00000028580 Kdm5dQ62240 1548 aa33.56■■■□□ 2.96
Ccdc34-201ENSMUST00000028580 NacadQ5SWP3 1504 aa33.43■■■□□ 2.94
Ccdc34-201ENSMUST00000028580 Baz1aO88379 1555 aa33.32■■■□□ 2.92
Ccdc34-201ENSMUST00000028580 HrcG5E8J6 738 aa32.98■■■□□ 2.87
Ccdc34-201ENSMUST00000028580 Crybg2B7ZCC2 1516 aa32.83■■■□□ 2.85
Ccdc34-201ENSMUST00000028580 Rpgrip1Q9EPQ2 1331 aa32.8■■■□□ 2.84
Ccdc34-201ENSMUST00000028580 Sycp2Q9CUU3 1500 aa32.71■■■□□ 2.83
Ccdc34-201ENSMUST00000028580 Ccdc136Q3TVA9 1136 aa32.71■■■□□ 2.83
Ccdc34-201ENSMUST00000028580 Smarca2Q6DIC0 1577 aa32.59■■■□□ 2.81
Ccdc34-201ENSMUST00000028580 Trim41Q5NCC3 630 aa32.25■■■□□ 2.75
Ccdc34-201ENSMUST00000028580 Acin1Q9JIX8 1338 aaKnown RBP32.21■■■□□ 2.75
Ccdc34-201ENSMUST00000028580 BicraF8VPZ9 1578 aa32.03■■■□□ 2.72
Ccdc34-201ENSMUST00000028580 Cep164Q5DU05 1446 aa32■■■□□ 2.71
Ccdc34-201ENSMUST00000028580 Brd4Q9ESU6 1400 aaKnown RBP31.77■■■□□ 2.68
Ccdc34-201ENSMUST00000028580 Ehmt2Q9Z148 1263 aaKnown RBP31.67■■■□□ 2.66
Ccdc34-201ENSMUST00000028580 Cecr2E9Q2Z1 1453 aa31.63■■■□□ 2.65
Ccdc34-201ENSMUST00000028580 Rsf1E9PWW9 1441 aaKnown RBP31.48■■■□□ 2.63
Ccdc34-201ENSMUST00000028580 Golga3P55937 1487 aa31.46■■■□□ 2.63
Ccdc34-201ENSMUST00000028580 Synj1Q8CHC4 1574 aa31.44■■■□□ 2.62
Ccdc34-201ENSMUST00000028580 Chic1Q8CBW7 227 aa31.29■■■□□ 2.6
Ccdc34-201ENSMUST00000028580 Cngb1E1AZ71 1325 aa31.29■■■□□ 2.6
Ccdc34-201ENSMUST00000028580 CftrP26361 1476 aa31.29■■■□□ 2.6
Ccdc34-201ENSMUST00000028580 Ccdc88bQ4QRL3 1481 aa31.24■■■□□ 2.59
Ccdc34-201ENSMUST00000028580 Smarca4Q3TKT4 1613 aaKnown RBP31.19■■■□□ 2.58
Ccdc34-201ENSMUST00000028580 Top2bQ64511 1612 aa31.13■■■□□ 2.57
Ccdc34-201ENSMUST00000028580 Cttnbp2B9EJA2 1648 aa31.13■■■□□ 2.57
Ccdc34-201ENSMUST00000028580 Gab3Q8BSM5 595 aa30.88■■■□□ 2.53
Ccdc34-201ENSMUST00000028580 Esf1Q3V1V3 845 aaKnown RBP30.83■■■□□ 2.53
Ccdc34-201ENSMUST00000028580 Atad2bE9Q166 1460 aaKnown RBP30.8■■■□□ 2.52
Ccdc34-201ENSMUST00000028580 Iqgap2Q3UQ44 1575 aa30.8■■■□□ 2.52
Ccdc34-201ENSMUST00000028580 Pds5bQ4VA53 1446 aaKnown RBP30.78■■■□□ 2.52
Ccdc34-201ENSMUST00000028580 Pcgf6Q99NA9 353 aa30.74■■■□□ 2.51
Ccdc34-201ENSMUST00000028580 Cc2d2aQ8CFW7 1633 aa30.67■■■□□ 2.5
Ccdc34-201ENSMUST00000028580 Fmn1Q05860 1466 aa30.65■■■□□ 2.5
Ccdc34-201ENSMUST00000028580 Rapgef2Q8CHG7 1496 aa30.55■■■□□ 2.48
Ccdc34-201ENSMUST00000028580 Top2aQ01320 1528 aaKnown RBP30.54■■■□□ 2.48
Ccdc34-201ENSMUST00000028580 NefmP08553 848 aa30.39■■■□□ 2.46
Ccdc34-201ENSMUST00000028580 Mier1Q5UAK0 511 aa30.31■■■□□ 2.44
Ccdc34-201ENSMUST00000028580 Wdr62Q3U3T8 1523 aa30.29■■■□□ 2.44
Ccdc34-201ENSMUST00000028580 Cep162Q6ZQ06 1403 aa30.24■■■□□ 2.43
Ccdc34-201ENSMUST00000028580 Supt5hO55201 1082 aaKnown RBP30.24■■■□□ 2.43
Ccdc34-201ENSMUST00000028580 Frmpd1A2AKB4 1549 aa30.23■■■□□ 2.43
Ccdc34-201ENSMUST00000028580 Ercc6F8VPZ5 1481 aa30.2■■■□□ 2.42
Ccdc34-201ENSMUST00000028580 TnnQ80Z71 1560 aa30.16■■■□□ 2.42
Ccdc34-201ENSMUST00000028580 Eif4g1Q6NZJ6 1600 aaKnown RBP30.09■■■□□ 2.41
Ccdc34-201ENSMUST00000028580 Unc13aQ4KUS2 1712 aa30.02■■■□□ 2.4
Ccdc34-201ENSMUST00000028580 Thoc2B1AZI6 1594 aaKnown RBP29.99■■■□□ 2.39
Ccdc34-201ENSMUST00000028580 Lamc3Q9R0B6 1581 aa29.87■■■□□ 2.37
Ccdc34-201ENSMUST00000028580 Zeb1Q64318 1117 aa29.86■■■□□ 2.37
Ccdc34-201ENSMUST00000028580 UbtfP25976 765 aaKnown RBP29.8■■■□□ 2.36
Ccdc34-201ENSMUST00000028580 Npm2Q80W85 207 aa29.78■■■□□ 2.36
Ccdc34-201ENSMUST00000028580 NrkQ9R0G8 1455 aa29.77■■■□□ 2.36
Ccdc34-201ENSMUST00000028580 Myt1lP97500 1187 aa29.76■■■□□ 2.36
Ccdc34-201ENSMUST00000028580 Arhgap35Q91YM2 1499 aa29.72■■■□□ 2.35
Ccdc34-201ENSMUST00000028580 Clip1Q922J3 1391 aa29.71■■■□□ 2.35
Ccdc34-201ENSMUST00000028580 Phldb1Q6PDH0 1371 aaKnown RBP29.68■■■□□ 2.34
Ccdc34-201ENSMUST00000028580 Kif15Q6P9L6 1387 aa29.63■■■□□ 2.33
Ccdc34-201ENSMUST00000028580 PtprkP35822 1457 aa29.62■■■□□ 2.33
Ccdc34-201ENSMUST00000028580 Fam135aQ6NS59 1506 aa29.61■■■□□ 2.33
Ccdc34-201ENSMUST00000028580 Sall2Q9QX96 1004 aa29.57■■■□□ 2.32
Ccdc34-201ENSMUST00000028580 Map3k1P53349 1493 aa29.56■■■□□ 2.32
Ccdc34-201ENSMUST00000028580 Shroom4Q1W617 1475 aa29.56■■■□□ 2.32
Ccdc34-201ENSMUST00000028580 Camsap1A2AHC3 1581 aa29.56■■■□□ 2.32
Ccdc34-201ENSMUST00000028580 Ncapd3Q6ZQK0 1506 aa29.51■■■□□ 2.32
Ccdc34-201ENSMUST00000028580 Eea1Q8BL66 1411 aa29.48■■■□□ 2.31
Ccdc34-201ENSMUST00000028580 Las1lA2BE28 776 aaKnown RBP29.46■■■□□ 2.31
Ccdc34-201ENSMUST00000028580 Arap1Q4LDD4 1452 aa29.45■■■□□ 2.3
Ccdc34-201ENSMUST00000028580 Ccdc18Q640L5 1455 aa29.44■■■□□ 2.3
Ccdc34-201ENSMUST00000028580 Neurod1Q60867 357 aa29.4■■■□□ 2.3
Ccdc34-201ENSMUST00000028580 Plekhg3Q4VAC9 1341 aa29.39■■■□□ 2.3
Ccdc34-201ENSMUST00000028580 Grin2bQ01097 1482 aa29.38■■■□□ 2.29
Ccdc34-201ENSMUST00000028580 Arhgef5E9Q7D5 1581 aa29.38■■■□□ 2.29
Ccdc34-201ENSMUST00000028580 Ubl4bQ9CQ84 188 aa29.32■■■□□ 2.28
Ccdc34-201ENSMUST00000028580 Mroh2bQ7M6Y6 1581 aa29.29■■■□□ 2.28
Ccdc34-201ENSMUST00000028580 Cux2P70298 1426 aa29.28■■■□□ 2.28
Ccdc34-201ENSMUST00000028580 Setd5Q5XJV7 1441 aa29.26■■■□□ 2.28
Ccdc34-201ENSMUST00000028580 Baz1bQ9Z277 1479 aa29.26■■■□□ 2.27
Ccdc34-201ENSMUST00000028580 Aebp2Q9Z248 504 aaKnown RBP29.24■■■□□ 2.27
Ccdc34-201ENSMUST00000028580 AqrQ8CFQ3 1481 aaKnown RBP29.24■■■□□ 2.27
Ccdc34-201ENSMUST00000028580 Il27Q8K3I6 234 aa29.24■■■□□ 2.27
Ccdc34-201ENSMUST00000028580 TonslQ6NZL6 1363 aa29.22■■■□□ 2.27
Ccdc34-201ENSMUST00000028580 ClspnQ80YR7 1315 aa29.21■■■□□ 2.27
Ccdc34-201ENSMUST00000028580 Erich3F6QRE9 1637 aa29.21■■■□□ 2.27
Ccdc34-201ENSMUST00000028580 Tiam1Q60610 1591 aa29.2■■■□□ 2.26
Ccdc34-201ENSMUST00000028580 Kdm5bQ80Y84 1544 aa29.17■■■□□ 2.26
Ccdc34-201ENSMUST00000028580 Ankrd26Q811D2 1581 aa29.12■■■□□ 2.25
Ccdc34-201ENSMUST00000028580 Wdr66E9Q743 1299 aa29.12■■■□□ 2.25
Ccdc34-201ENSMUST00000028580 TchhA0A0B4J1F9 1599 aa29.11■■■□□ 2.25
Ccdc34-201ENSMUST00000028580 Naip1Q9QWK5 1403 aa29.06■■■□□ 2.24
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms