RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Gm10160F6Y577 67 aa9.9□□□□□ -0.82
Trim8-201ENSMUST00000026008 Igkv3-3A0A140T8Q0 119 aa9.9□□□□□ -0.83
Trim8-201ENSMUST00000026008 1600014C23RikQ9DAX4 101 aa9.9□□□□□ -0.83
Trim8-201ENSMUST00000026008 Gm10065F6TJM2 114 aa9.86□□□□□ -0.83
Trim8-201ENSMUST00000026008 OxtP35454 125 aa9.84□□□□□ -0.83
Trim8-201ENSMUST00000026008 Dync2h1Q45VK7 4306 aa9.84□□□□□ -0.83
Trim8-201ENSMUST00000026008 Krtap10-4Q08EG8 221 aa9.84□□□□□ -0.83
Trim8-201ENSMUST00000026008 PlecQ9QXS1 4691 aaKnown RBP9.83□□□□□ -0.84
Trim8-201ENSMUST00000026008 Krtap29-1A2A5X4 342 aa9.82□□□□□ -0.84
Trim8-201ENSMUST00000026008 Dnah5Q8VHE6 4621 aa9.81□□□□□ -0.84
Trim8-201ENSMUST00000026008 4933415A04RikQ9D443 101 aa9.8□□□□□ -0.84
Trim8-201ENSMUST00000026008 Gm9918Q8BUR5 174 aa9.79□□□□□ -0.84
Trim8-201ENSMUST00000026008 Ly6g6cQ9Z1Q4 126 aa9.77□□□□□ -0.84
Trim8-201ENSMUST00000026008 Gm20661K7N787 53 aa9.77□□□□□ -0.85
Trim8-201ENSMUST00000026008 Cypt14J3QPF7 87 aa9.76□□□□□ -0.85
Trim8-201ENSMUST00000026008 NbdyA0A0N4SUI7 68 aa9.75□□□□□ -0.85
Trim8-201ENSMUST00000026008 Znf706Q9D115 76 aaKnown RBP9.75□□□□□ -0.85
Trim8-201ENSMUST00000026008 Sox16Q62247 57 aa9.75□□□□□ -0.85
Trim8-201ENSMUST00000026008 SptssbQ925E8 76 aa9.74□□□□□ -0.85
Trim8-201ENSMUST00000026008 Defb13Q8R2I4 64 aa9.73□□□□□ -0.85
Trim8-201ENSMUST00000026008 Gm16253D3Z167 63 aa9.72□□□□□ -0.85
Trim8-201ENSMUST00000026008 Defb39Q70KL3 74 aa9.72□□□□□ -0.85
Trim8-201ENSMUST00000026008 Dnah7cA0A087WR13 4024 aa9.71□□□□□ -0.85
Trim8-201ENSMUST00000026008 2310050C09RikG5E8Z3 280 aa9.7□□□□□ -0.86
Trim8-201ENSMUST00000026008 Wfdc3Q14AE4 130 aa9.69□□□□□ -0.86
Trim8-201ENSMUST00000026008 Krtap14O08640 167 aa9.67□□□□□ -0.86
Trim8-201ENSMUST00000026008 Defb11Q8R2I7 77 aa9.67□□□□□ -0.86
Trim8-201ENSMUST00000026008 Gm21798J3QNU5 87 aa9.67□□□□□ -0.86
Trim8-201ENSMUST00000026008 Spaca4Q80ZQ0 127 aa9.66□□□□□ -0.86
Trim8-201ENSMUST00000026008 1700042G07RikB1AUF7 90 aa9.65□□□□□ -0.86
Trim8-201ENSMUST00000026008 Krtap13O88375 197 aa9.62□□□□□ -0.87
Trim8-201ENSMUST00000026008 Dnah7aE9Q0T8 4024 aa9.62□□□□□ -0.87
Trim8-201ENSMUST00000026008 Gpr15lA0A0B4J1N3 78 aa9.6□□□□□ -0.87
Trim8-201ENSMUST00000026008 Tnp2P11378 117 aa9.6□□□□□ -0.87
Trim8-201ENSMUST00000026008 Cypt15B1AXS0 87 aa9.6□□□□□ -0.87
Trim8-201ENSMUST00000026008 Krtap10-10A0A1W2P7T6 217 aa9.58□□□□□ -0.88
Trim8-201ENSMUST00000026008 Ndufb1P0DN34 57 aa9.55□□□□□ -0.88
Trim8-201ENSMUST00000026008 Gm26620Q9CY65 116 aa9.54□□□□□ -0.88
Trim8-201ENSMUST00000026008 Gm10999F6Q4M4 69 aa9.52□□□□□ -0.88
Trim8-201ENSMUST00000026008 Stard9Q80TF6 4561 aa9.52□□□□□ -0.89
Trim8-201ENSMUST00000026008 Gm2696A0A1W2P709 240 aa9.48□□□□□ -0.89
Trim8-201ENSMUST00000026008 Hectd4E9Q2E4 4418 aa9.47□□□□□ -0.89
Trim8-201ENSMUST00000026008 Gm3646F6S692 53 aa9.47□□□□□ -0.89
Trim8-201ENSMUST00000026008 Gm10643Q3URG9 111 aa9.44□□□□□ -0.9
Trim8-201ENSMUST00000026008 Defb1P56386 69 aa9.43□□□□□ -0.9
Trim8-201ENSMUST00000026008 Ndufs5Q99LY9 106 aa9.43□□□□□ -0.9
Trim8-201ENSMUST00000026008 Q8BGJ3 129 aa9.42□□□□□ -0.9
Trim8-201ENSMUST00000026008 Vps13dB1ART2 4390 aa9.41□□□□□ -0.9
Trim8-201ENSMUST00000026008 Lrp1bQ9JI18 4599 aa9.4□□□□□ -0.9
Trim8-201ENSMUST00000026008 Limd2Q8BGB5 128 aa9.39□□□□□ -0.91
Trim8-201ENSMUST00000026008 Uqcr11Q9CPX8 56 aa9.38□□□□□ -0.91
Trim8-201ENSMUST00000026008 Pkd1O08852 4293 aa9.37□□□□□ -0.91
Trim8-201ENSMUST00000026008 2310034C09RikQ9D746 214 aa9.36□□□□□ -0.91
Trim8-201ENSMUST00000026008 Dnah2P0C6F1 4456 aa9.35□□□□□ -0.91
Trim8-201ENSMUST00000026008 Gm9821Q8K076 103 aa9.3□□□□□ -0.92
Trim8-201ENSMUST00000026008 ApobE9Q414 4505 aa9.21□□□□□ -0.93
Trim8-201ENSMUST00000026008 Ryr3A2AGL3 4863 aa9.21□□□□□ -0.94
Trim8-201ENSMUST00000026008 Gm21887J3QQ04 176 aa9.2□□□□□ -0.94
Trim8-201ENSMUST00000026008 2310079G19RikQ9D6L6 185 aa9.18□□□□□ -0.94
Trim8-201ENSMUST00000026008 RetnlbQ99P86 105 aa9.16□□□□□ -0.94
Trim8-201ENSMUST00000026008 Pkhd1E9PZ36 4059 aa9.14□□□□□ -0.95
Trim8-201ENSMUST00000026008 Krtap3-2Q9D638 99 aa9.12□□□□□ -0.95
Trim8-201ENSMUST00000026008 Krtap3-3Q9D7P0 99 aa9.12□□□□□ -0.95
Trim8-201ENSMUST00000026008 4930507D05RikQ8C9C9 103 aa9.1□□□□□ -0.95
Trim8-201ENSMUST00000026008 Gm4491E0CX42 125 aa9.09□□□□□ -0.96
Trim8-201ENSMUST00000026008 Fat1A0A1L1SQU7 4645 aa9.08□□□□□ -0.96
Trim8-201ENSMUST00000026008 Gm12216A0A1W2P827 62 aa9.08□□□□□ -0.96
Trim8-201ENSMUST00000026008 Gm11939A2A592 99 aa9.06□□□□□ -0.96
Trim8-201ENSMUST00000026008 D6Ertd527eA0A0N4SWI3 464 aa9.03□□□□□ -0.96
Trim8-201ENSMUST00000026008 A930033H14RikG5E8X6 103 aa9□□□□□ -0.97
Trim8-201ENSMUST00000026008 Dync1h1Q9JHU4 4644 aaKnown RBP8.99□□□□□ -0.97
Trim8-201ENSMUST00000026008 SacsQ9JLC8 4582 aa8.97□□□□□ -0.97
Trim8-201ENSMUST00000026008 Fat2Q5F226 4351 aa8.96□□□□□ -0.97
Trim8-201ENSMUST00000026008 Lrp1Q91ZX7 4545 aaKnown RBP8.93□□□□□ -0.98
Trim8-201ENSMUST00000026008 Vps13bQ80TY5 3993 aa8.87□□□□□ -0.99
Trim8-201ENSMUST00000026008 Gm20538F6Z9R1 75 aa8.8□□□□□ -1
Trim8-201ENSMUST00000026008 Rps29P62274 56 aa8.79□□□□□ -1
Trim8-201ENSMUST00000026008 Gm3880A0A1B0GSB3 72 aa8.78□□□□□ -1
Trim8-201ENSMUST00000026008 Mp68P56379 58 aa8.78□□□□□ -1
Trim8-201ENSMUST00000026008 Pkhd1l1Q80ZA4 4249 aa8.77□□□□□ -1.01
Trim8-201ENSMUST00000026008 Gm20537G3UYK7 97 aa8.74□□□□□ -1.01
Trim8-201ENSMUST00000026008 CriptO70333 101 aa8.74□□□□□ -1.01
Trim8-201ENSMUST00000026008 Cox6b2Q80ZN9 88 aa8.74□□□□□ -1.01
Trim8-201ENSMUST00000026008 Pla2g10Q9QXX3 151 aa8.71□□□□□ -1.01
Trim8-201ENSMUST00000026008 Ryr2E9Q401 4966 aaKnown RBP8.7□□□□□ -1.02
Trim8-201ENSMUST00000026008 Kmt2cQ8BRH4 4903 aa8.69□□□□□ -1.02
Trim8-201ENSMUST00000026008 Gm9736A0A1W2P7N1 277 aa8.67□□□□□ -1.02
Trim8-201ENSMUST00000026008 Gm5767A0A0J9YTU8 78 aa8.66□□□□□ -1.02
Trim8-201ENSMUST00000026008 Prm2P07978 107 aa8.65□□□□□ -1.02
Trim8-201ENSMUST00000026008 Abca13Q5SSE9 5034 aa8.64□□□□□ -1.03
Trim8-201ENSMUST00000026008 Mycbp2Q7TPH6 4711 aa8.63□□□□□ -1.03
Trim8-201ENSMUST00000026008 Ryr1E9PZQ0 5035 aa8.62□□□□□ -1.03
Trim8-201ENSMUST00000026008 Gm10382Q3V0T5 144 aa8.58□□□□□ -1.04
Trim8-201ENSMUST00000026008 Krtap15-1Q9QZU5 150 aa8.58□□□□□ -1.04
Trim8-201ENSMUST00000026008 Krtap19-5O08632 62 aa8.56□□□□□ -1.04
Trim8-201ENSMUST00000026008 Gm5965D3Z724 196 aa8.54□□□□□ -1.04
Trim8-201ENSMUST00000026008 Fat3Q8BNA6 4555 aa8.53□□□□□ -1.04
Trim8-201ENSMUST00000026008 Rnase13Q5GAM7 153 aa8.53□□□□□ -1.04
Trim8-201ENSMUST00000026008 Gm17606F6ZL36 78 aa8.52□□□□□ -1.04
Trim8-201ENSMUST00000026008 Romo1P60603 79 aa8.48□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 123.7 ms