RNA–Protein interactions for RNA: ENSMUST00000172332.3

Ccdc71l-201, Transcript of Coiled-coil domain-containing 71-like, mousemouse

APPRIS P1 BASIC

Gene Ccdc71l, Length 4,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71l-201ENSMUST00000172332 Sec61gP60060 68 aa10.63□□□□□ -0.71
Ccdc71l-201ENSMUST00000172332 Phf5aP83870 110 aaKnown RBP10.62□□□□□ -0.71
Ccdc71l-201ENSMUST00000172332 AY074887Q8R5F9 132 aa10.61□□□□□ -0.71
Ccdc71l-201ENSMUST00000172332 1810062G17RikG3X8Y2 129 aa10.61□□□□□ -0.71
Ccdc71l-201ENSMUST00000172332 Itpr2Q9Z329 2701 aa10.61□□□□□ -0.71
Ccdc71l-201ENSMUST00000172332 Gm7137J3QMW1 236 aa10.6□□□□□ -0.71
Ccdc71l-201ENSMUST00000172332 Ndufb1P0DN34 57 aa10.6□□□□□ -0.71
Ccdc71l-201ENSMUST00000172332 Gm10837Q3UTT8 145 aa10.6□□□□□ -0.71
Ccdc71l-201ENSMUST00000172332 C530025M09RikF6RGA8 229 aa10.59□□□□□ -0.71
Ccdc71l-201ENSMUST00000172332 Sprr4Q8CGN8 76 aa10.59□□□□□ -0.71
Ccdc71l-201ENSMUST00000172332 Gm5617Q91VN2 117 aa10.59□□□□□ -0.71
Ccdc71l-201ENSMUST00000172332 A530084C06RikQ3UTW2 186 aa10.58□□□□□ -0.72
Ccdc71l-201ENSMUST00000172332 Ighv2-2A0A075B5P8 116 aa10.58□□□□□ -0.72
Ccdc71l-201ENSMUST00000172332 P01821 116 aa10.58□□□□□ -0.72
Ccdc71l-201ENSMUST00000172332 Rpl37aP61514 92 aa10.58□□□□□ -0.72
Ccdc71l-201ENSMUST00000172332 Gm10308Q9CVR5 141 aa10.57□□□□□ -0.72
Ccdc71l-201ENSMUST00000172332 Gm7138L7N2C3 230 aa10.57□□□□□ -0.72
Ccdc71l-201ENSMUST00000172332 Gm3238W4VSP7 230 aa10.57□□□□□ -0.72
Ccdc71l-201ENSMUST00000172332 Psors1c2Q80ZC9 134 aa10.57□□□□□ -0.72
Ccdc71l-201ENSMUST00000172332 Igkv8-28A0A0G2JE47 121 aa10.56□□□□□ -0.72
Ccdc71l-201ENSMUST00000172332 Spint4Q9D263 159 aa10.55□□□□□ -0.72
Ccdc71l-201ENSMUST00000172332 Tenm4Q3UHK6 2771 aa10.54□□□□□ -0.72
Ccdc71l-201ENSMUST00000172332 Q8BT88 171 aa10.54□□□□□ -0.72
Ccdc71l-201ENSMUST00000172332 Igkv8-19A0A0G2JFN8 121 aa10.53□□□□□ -0.72
Ccdc71l-201ENSMUST00000172332 AplnQ9R0R4 77 aa10.53□□□□□ -0.72
Ccdc71l-201ENSMUST00000172332 Bean1Q9EQG5 255 aa10.53□□□□□ -0.72
Ccdc71l-201ENSMUST00000172332 Sprr1bQ62267 153 aa10.51□□□□□ -0.73
Ccdc71l-201ENSMUST00000172332 A330070K13RikQ8CA53 115 aa10.5□□□□□ -0.73
Ccdc71l-201ENSMUST00000172332 Svep1A2AVA0 3567 aa10.5□□□□□ -0.73
Ccdc71l-201ENSMUST00000172332 Gm10160F6Y577 67 aa10.49□□□□□ -0.73
Ccdc71l-201ENSMUST00000172332 Chchd10Q7TNL9 138 aa10.48□□□□□ -0.73
Ccdc71l-201ENSMUST00000172332 Muc4Q8JZM8 3443 aa10.48□□□□□ -0.73
Ccdc71l-201ENSMUST00000172332 AI606181Q8C7B9 129 aa10.47□□□□□ -0.73
Ccdc71l-201ENSMUST00000172332 Rps28P62858 69 aaKnown RBP10.47□□□□□ -0.73
Ccdc71l-201ENSMUST00000172332 Prol1E9PYQ4 312 aa10.46□□□□□ -0.74
Ccdc71l-201ENSMUST00000172332 Fam229bQ8CF36 80 aa10.44□□□□□ -0.74
Ccdc71l-201ENSMUST00000172332 Znf414Q9DCK4 299 aa10.44□□□□□ -0.74
Ccdc71l-201ENSMUST00000172332 H2al1kJ3QP08 105 aa10.44□□□□□ -0.74
Ccdc71l-201ENSMUST00000172332 Gm28374F6SG70 93 aa10.43□□□□□ -0.74
Ccdc71l-201ENSMUST00000172332 Spaca4Q80ZQ0 127 aa10.43□□□□□ -0.74
Ccdc71l-201ENSMUST00000172332 Tenm3Q9WTS6 2715 aa10.41□□□□□ -0.74
Ccdc71l-201ENSMUST00000172332 Smim29Q8R043 75 aa10.41□□□□□ -0.74
Ccdc71l-201ENSMUST00000172332 H2al1mQ9DAD9 105 aa10.4□□□□□ -0.74
Ccdc71l-201ENSMUST00000172332 Gpr15lA0A0B4J1N3 78 aa10.36□□□□□ -0.75
Ccdc71l-201ENSMUST00000172332 Gm10999F6Q4M4 69 aa10.36□□□□□ -0.75
Ccdc71l-201ENSMUST00000172332 Pdzd2E9Q1M1 2796 aa10.36□□□□□ -0.75
Ccdc71l-201ENSMUST00000172332 Helz2E9QAM5 2947 aaKnown RBP10.35□□□□□ -0.75
Ccdc71l-201ENSMUST00000172332 Gm10320E9PW43 113 aa10.34□□□□□ -0.75
Ccdc71l-201ENSMUST00000172332 Spata3Q9D9T6 193 aa10.34□□□□□ -0.75
Ccdc71l-201ENSMUST00000172332 A930002H24RikQ8C8Y3 163 aa10.33□□□□□ -0.76
Ccdc71l-201ENSMUST00000172332 Plac8Q9JI48 112 aa10.33□□□□□ -0.76
Ccdc71l-201ENSMUST00000172332 FcgbpE9Q0B5 2583 aa10.32□□□□□ -0.76
Ccdc71l-201ENSMUST00000172332 Anapc11Q9CPX9 84 aa10.31□□□□□ -0.76
Ccdc71l-201ENSMUST00000172332 Coa5Q99M07 74 aa10.31□□□□□ -0.76
Ccdc71l-201ENSMUST00000172332 Gm27235Q3UW50 83 aa10.3□□□□□ -0.76
Ccdc71l-201ENSMUST00000172332 Defb11Q8R2I7 77 aa10.29□□□□□ -0.76
Ccdc71l-201ENSMUST00000172332 CnbpP53996 178 aaKnown RBP10.29□□□□□ -0.76
Ccdc71l-201ENSMUST00000172332 Cmya5Q70KF4 3739 aa10.29□□□□□ -0.76
Ccdc71l-201ENSMUST00000172332 OtogO55225 2910 aa10.28□□□□□ -0.76
Ccdc71l-201ENSMUST00000172332 Gm11213A0A1B0GR83 88 aa10.27□□□□□ -0.76
Ccdc71l-201ENSMUST00000172332 Defb1P56386 69 aa10.27□□□□□ -0.77
Ccdc71l-201ENSMUST00000172332 Cdc42se1Q8BHL7 80 aa10.26□□□□□ -0.77
Ccdc71l-201ENSMUST00000172332 Gm7276Q3TYW4 209 aa10.26□□□□□ -0.77
Ccdc71l-201ENSMUST00000172332 Defb9Q8R2I6 67 aa10.25□□□□□ -0.77
Ccdc71l-201ENSMUST00000172332 Gm36176A0A1W2P8D5 158 aa10.25□□□□□ -0.77
Ccdc71l-201ENSMUST00000172332 Gm20661K7N787 53 aa10.23□□□□□ -0.77
Ccdc71l-201ENSMUST00000172332 RetnlbQ99P86 105 aa10.23□□□□□ -0.77
Ccdc71l-201ENSMUST00000172332 Cystm1Q8K353 104 aa10.22□□□□□ -0.77
Ccdc71l-201ENSMUST00000172332 ApcQ61315 2845 aa10.21□□□□□ -0.78
Ccdc71l-201ENSMUST00000172332 Srrm2Q8BTI8 2703 aaKnown RBP10.21□□□□□ -0.78
Ccdc71l-201ENSMUST00000172332 Gm11565A2A4M7 156 aa10.2□□□□□ -0.78
Ccdc71l-201ENSMUST00000172332 Q8BGJ3 129 aa10.19□□□□□ -0.78
Ccdc71l-201ENSMUST00000172332 Phxr5P08399 672 aa10.14□□□□□ -0.79
Ccdc71l-201ENSMUST00000172332 Chtf8P0CG14 533 aa10.14□□□□□ -0.79
Ccdc71l-201ENSMUST00000172332 Gm9508A0A1W2P7W0 230 aa10.12□□□□□ -0.79
Ccdc71l-201ENSMUST00000172332 Phxr4P15974 95 aa10.1□□□□□ -0.79
Ccdc71l-201ENSMUST00000172332 Fam104aA2A6P4 185 aa10.07□□□□□ -0.8
Ccdc71l-201ENSMUST00000172332 Limd2Q8BGB5 128 aa10.07□□□□□ -0.8
Ccdc71l-201ENSMUST00000172332 Cypt15B1AXS0 87 aa10.07□□□□□ -0.8
Ccdc71l-201ENSMUST00000172332 TgO08710 2766 aa10.06□□□□□ -0.8
Ccdc71l-201ENSMUST00000172332 Zcchc13Q9D548 170 aa10.03□□□□□ -0.8
Ccdc71l-201ENSMUST00000172332 4930507D05RikQ8C9C9 103 aa10.01□□□□□ -0.81
Ccdc71l-201ENSMUST00000172332 Gm17606F6ZL36 78 aa10□□□□□ -0.81
Ccdc71l-201ENSMUST00000172332 A730071L15RikQ8C4X0 137 aa9.99□□□□□ -0.81
Ccdc71l-201ENSMUST00000172332 Col7a1Q63870 2944 aa9.95□□□□□ -0.82
Ccdc71l-201ENSMUST00000172332 AW011738F6S7Q2 159 aa9.9□□□□□ -0.82
Ccdc71l-201ENSMUST00000172332 Tenm1Q9WTS4 2731 aa9.9□□□□□ -0.83
Ccdc71l-201ENSMUST00000172332 Sprr1aQ62266 144 aa9.85□□□□□ -0.83
Ccdc71l-201ENSMUST00000172332 SmcpP15265 143 aa9.84□□□□□ -0.83
Ccdc71l-201ENSMUST00000172332 Gm12216A0A1W2P827 62 aa9.83□□□□□ -0.84
Ccdc71l-201ENSMUST00000172332 Gm17349F7BGH6 99 aa9.82□□□□□ -0.84
Ccdc71l-201ENSMUST00000172332 2310034C09RikQ9D746 214 aa9.81□□□□□ -0.84
Ccdc71l-201ENSMUST00000172332 6030445D17RikE9Q8F9 148 aa9.8□□□□□ -0.84
Ccdc71l-201ENSMUST00000172332 Uqcr11Q9CPX8 56 aa9.8□□□□□ -0.84
Ccdc71l-201ENSMUST00000172332 Gm10065F6TJM2 114 aa9.8□□□□□ -0.84
Ccdc71l-201ENSMUST00000172332 NbdyA0A0N4SUI7 68 aa9.8□□□□□ -0.84
Ccdc71l-201ENSMUST00000172332 Cypt14J3QPF7 87 aa9.78□□□□□ -0.84
Ccdc71l-201ENSMUST00000172332 Csmd2V9GX34 3611 aa9.77□□□□□ -0.84
Ccdc71l-201ENSMUST00000172332 Gm10139O88245 57 aa9.76□□□□□ -0.85
Ccdc71l-201ENSMUST00000172332 Fbn1Q61554 2873 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 58.8 ms