RNA–Protein interactions for RNA: ENSMUST00000111760.2

Nckap1-202, Transcript of Nck-associated protein 1, mousemouse

TSL 1 (best) BASIC

Gene Nckap1, Length 4,597 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1-202ENSMUST00000111760 Adgrg4B7ZCC9 3073 aa13.72□□□□□ -0.21
Nckap1-202ENSMUST00000111760 Gm10999F6Q4M4 69 aa13.71□□□□□ -0.21
Nckap1-202ENSMUST00000111760 1810062G17RikG3X8Y2 129 aa13.7□□□□□ -0.22
Nckap1-202ENSMUST00000111760 Spaca4Q80ZQ0 127 aa13.7□□□□□ -0.22
Nckap1-202ENSMUST00000111760 Gpr15lA0A0B4J1N3 78 aa13.69□□□□□ -0.22
Nckap1-202ENSMUST00000111760 C530025M09RikF6RGA8 229 aa13.65□□□□□ -0.22
Nckap1-202ENSMUST00000111760 Tex15F8VPN2 2785 aa13.65□□□□□ -0.22
Nckap1-202ENSMUST00000111760 Gm7138L7N2C3 230 aa13.64□□□□□ -0.23
Nckap1-202ENSMUST00000111760 Gm3238W4VSP7 230 aa13.64□□□□□ -0.23
Nckap1-202ENSMUST00000111760 DspE9Q557 2883 aaKnown RBP13.64□□□□□ -0.23
Nckap1-202ENSMUST00000111760 VcanQ62059 3357 aa13.64□□□□□ -0.23
Nckap1-202ENSMUST00000111760 A930002H24RikQ8C8Y3 163 aa13.63□□□□□ -0.23
Nckap1-202ENSMUST00000111760 9530053A07RikE9PVG8 2581 aa13.61□□□□□ -0.23
Nckap1-202ENSMUST00000111760 Gm27235Q3UW50 83 aa13.6□□□□□ -0.23
Nckap1-202ENSMUST00000111760 A330070K13RikQ8CA53 115 aa13.59□□□□□ -0.23
Nckap1-202ENSMUST00000111760 Gm7137J3QMW1 236 aa13.57□□□□□ -0.24
Nckap1-202ENSMUST00000111760 Stab2Q8R4U0 2559 aa13.57□□□□□ -0.24
Nckap1-202ENSMUST00000111760 FlncQ8VHX6 2726 aaKnown RBP13.56□□□□□ -0.24
Nckap1-202ENSMUST00000111760 Utp20Q5XG71 2788 aaKnown RBP13.56□□□□□ -0.24
Nckap1-202ENSMUST00000111760 Dchs2A0A0A6YW72 3346 aa13.56□□□□□ -0.24
Nckap1-202ENSMUST00000111760 Coa5Q99M07 74 aa13.54□□□□□ -0.24
Nckap1-202ENSMUST00000111760 Cdc42se1Q8BHL7 80 aa13.53□□□□□ -0.24
Nckap1-202ENSMUST00000111760 Gm20661K7N787 53 aa13.53□□□□□ -0.24
Nckap1-202ENSMUST00000111760 Limd2Q8BGB5 128 aa13.52□□□□□ -0.25
Nckap1-202ENSMUST00000111760 Gm17606F6ZL36 78 aa13.51□□□□□ -0.25
Nckap1-202ENSMUST00000111760 Defb1P56386 69 aa13.49□□□□□ -0.25
Nckap1-202ENSMUST00000111760 Q8BGJ3 129 aa13.47□□□□□ -0.25
Nckap1-202ENSMUST00000111760 RetnlbQ99P86 105 aa13.46□□□□□ -0.25
Nckap1-202ENSMUST00000111760 Gm7276Q3TYW4 209 aa13.43□□□□□ -0.26
Nckap1-202ENSMUST00000111760 Igfn1Q3KNY0 2849 aa13.42□□□□□ -0.26
Nckap1-202ENSMUST00000111760 4930507D05RikQ8C9C9 103 aa13.41□□□□□ -0.26
Nckap1-202ENSMUST00000111760 Fam229bQ8CF36 80 aa13.4□□□□□ -0.26
Nckap1-202ENSMUST00000111760 Zzef1Q5SSH7 2924 aa13.39□□□□□ -0.27
Nckap1-202ENSMUST00000111760 Plac8Q9JI48 112 aa13.39□□□□□ -0.27
Nckap1-202ENSMUST00000111760 Gm11213A0A1B0GR83 88 aa13.38□□□□□ -0.27
Nckap1-202ENSMUST00000111760 Defb9Q8R2I6 67 aa13.37□□□□□ -0.27
Nckap1-202ENSMUST00000111760 Dchs1E9PVD3 3291 aa13.37□□□□□ -0.27
Nckap1-202ENSMUST00000111760 Anapc11Q9CPX9 84 aa13.36□□□□□ -0.27
Nckap1-202ENSMUST00000111760 AW011738F6S7Q2 159 aa13.36□□□□□ -0.27
Nckap1-202ENSMUST00000111760 Phxr5P08399 672 aa13.36□□□□□ -0.27
Nckap1-202ENSMUST00000111760 Chd9Q8BYH8 2885 aa13.34□□□□□ -0.27
Nckap1-202ENSMUST00000111760 Phxr4P15974 95 aa13.34□□□□□ -0.27
Nckap1-202ENSMUST00000111760 Celsr2Q9R0M0 2920 aa13.34□□□□□ -0.27
Nckap1-202ENSMUST00000111760 Gm12216A0A1W2P827 62 aa13.32□□□□□ -0.28
Nckap1-202ENSMUST00000111760 Smim29Q8R043 75 aa13.32□□□□□ -0.28
Nckap1-202ENSMUST00000111760 CnbpP53996 178 aaKnown RBP13.31□□□□□ -0.28
Nckap1-202ENSMUST00000111760 Myo15aQ9QZZ4 3511 aa13.31□□□□□ -0.28
Nckap1-202ENSMUST00000111760 Cypt15B1AXS0 87 aa13.28□□□□□ -0.28
Nckap1-202ENSMUST00000111760 Itpr2Q9Z329 2701 aa13.27□□□□□ -0.28
Nckap1-202ENSMUST00000111760 Wdfy3Q6VNB8 3508 aa13.27□□□□□ -0.29
Nckap1-202ENSMUST00000111760 Chtf8P0CG14 533 aa13.25□□□□□ -0.29
Nckap1-202ENSMUST00000111760 Trank1Q8BV79 2999 aa13.21□□□□□ -0.29
Nckap1-202ENSMUST00000111760 Gm10320E9PW43 113 aa13.21□□□□□ -0.29
Nckap1-202ENSMUST00000111760 Fam104aA2A6P4 185 aa13.18□□□□□ -0.3
Nckap1-202ENSMUST00000111760 Zcchc13Q9D548 170 aa13.16□□□□□ -0.3
Nckap1-202ENSMUST00000111760 Gm36176A0A1W2P8D5 158 aa13.15□□□□□ -0.3
Nckap1-202ENSMUST00000111760 Nf1Q04690 2841 aa13.15□□□□□ -0.3
Nckap1-202ENSMUST00000111760 RelnQ60841 3461 aa13.11□□□□□ -0.31
Nckap1-202ENSMUST00000111760 Uqcr11Q9CPX8 56 aa13.08□□□□□ -0.32
Nckap1-202ENSMUST00000111760 SpegQ62407 3262 aa13.07□□□□□ -0.32
Nckap1-202ENSMUST00000111760 Cystm1Q8K353 104 aa13.01□□□□□ -0.33
Nckap1-202ENSMUST00000111760 LrbaQ9ESE1 2856 aa12.96□□□□□ -0.33
Nckap1-202ENSMUST00000111760 DmdP11531 3678 aa12.96□□□□□ -0.34
Nckap1-202ENSMUST00000111760 OxtP35454 125 aa12.95□□□□□ -0.34
Nckap1-202ENSMUST00000111760 2310034C09RikQ9D746 214 aa12.93□□□□□ -0.34
Nckap1-202ENSMUST00000111760 Gm10065F6TJM2 114 aa12.92□□□□□ -0.34
Nckap1-202ENSMUST00000111760 Gm17349F7BGH6 99 aa12.92□□□□□ -0.34
Nckap1-202ENSMUST00000111760 Rnase13Q5GAM7 153 aa12.9□□□□□ -0.34
Nckap1-202ENSMUST00000111760 Gm26620Q9CY65 116 aa12.9□□□□□ -0.34
Nckap1-202ENSMUST00000111760 Gm9508A0A1W2P7W0 230 aa12.9□□□□□ -0.34
Nckap1-202ENSMUST00000111760 Mp68P56379 58 aa12.89□□□□□ -0.35
Nckap1-202ENSMUST00000111760 Cypt14J3QPF7 87 aa12.88□□□□□ -0.35
Nckap1-202ENSMUST00000111760 NbdyA0A0N4SUI7 68 aa12.86□□□□□ -0.35
Nckap1-202ENSMUST00000111760 Gm10643Q3URG9 111 aa12.86□□□□□ -0.35
Nckap1-202ENSMUST00000111760 Sprr1aQ62266 144 aa12.86□□□□□ -0.35
Nckap1-202ENSMUST00000111760 FcgbpE9Q0B5 2583 aa12.85□□□□□ -0.35
Nckap1-202ENSMUST00000111760 Tenm3Q9WTS6 2715 aa12.85□□□□□ -0.35
Nckap1-202ENSMUST00000111760 Pdzd2E9Q1M1 2796 aa12.85□□□□□ -0.35
Nckap1-202ENSMUST00000111760 Tenm4Q3UHK6 2771 aa12.82□□□□□ -0.36
Nckap1-202ENSMUST00000111760 Gm21798J3QNU5 87 aa12.81□□□□□ -0.36
Nckap1-202ENSMUST00000111760 6030445D17RikE9Q8F9 148 aa12.79□□□□□ -0.36
Nckap1-202ENSMUST00000111760 A730071L15RikQ8C4X0 137 aa12.79□□□□□ -0.36
Nckap1-202ENSMUST00000111760 ApcQ61315 2845 aa12.73□□□□□ -0.37
Nckap1-202ENSMUST00000111760 Gm10139O88245 57 aa12.71□□□□□ -0.37
Nckap1-202ENSMUST00000111760 Helz2E9QAM5 2947 aaKnown RBP12.7□□□□□ -0.38
Nckap1-202ENSMUST00000111760 TgO08710 2766 aa12.69□□□□□ -0.38
Nckap1-202ENSMUST00000111760 Srrm2Q8BTI8 2703 aaKnown RBP12.68□□□□□ -0.38
Nckap1-202ENSMUST00000111760 SpenQ62504 3644 aaKnown RBP12.67□□□□□ -0.38
Nckap1-202ENSMUST00000111760 Akap9Q70FJ1 3797 aa12.67□□□□□ -0.38
Nckap1-202ENSMUST00000111760 Odf3bQ5M8M2 238 aa12.65□□□□□ -0.38
Nckap1-202ENSMUST00000111760 Muc5acE9QAQ8 3455 aa12.55□□□□□ -0.4
Nckap1-202ENSMUST00000111760 Gm3880A0A1B0GSB3 72 aa12.54□□□□□ -0.4
Nckap1-202ENSMUST00000111760 Csmd1Q923L3 3564 aa12.5□□□□□ -0.41
Nckap1-202ENSMUST00000111760 Gm4491E0CX42 125 aa12.5□□□□□ -0.41
Nckap1-202ENSMUST00000111760 Gm9507D3Z5T3 223 aa12.48□□□□□ -0.41
Nckap1-202ENSMUST00000111760 Gm16253D3Z167 63 aa12.46□□□□□ -0.41
Nckap1-202ENSMUST00000111760 Gm37013Q8K491 104 aa12.44□□□□□ -0.42
Nckap1-202ENSMUST00000111760 Vps13cQ8BX70 3748 aa12.43□□□□□ -0.42
Nckap1-202ENSMUST00000111760 Zfhx4Q9JJN2 3550 aa12.42□□□□□ -0.42
Nckap1-202ENSMUST00000111760 2310061N02RikQ9D6S9 174 aa12.4□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 124 ms